FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7301, 851 aa
  1>>>pF1KB7301 851 - 851 aa - 851 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.1478+/-0.00151; mu= -4.5058+/- 0.091
 mean_var=353.4019+/-71.806, 0's: 0 Z-trim(109.4): 30  B-trim: 313 in 1/49
 Lambda= 0.068224
 statistics sampled from 10860 (10872) to 10860 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.334), width:  16
 Scan time:  4.710

The best scores are:                                      opt bits E(32554)
CCDS13117.1 ESF1 gene_id:51575|Hs108|chr20         ( 851) 5527 558.9 1.3e-158


>>CCDS13117.1 ESF1 gene_id:51575|Hs108|chr20              (851 aa)
 initn: 5527 init1: 5527 opt: 5527  Z-score: 2961.0  bits: 558.9 E(32554): 1.3e-158
Smith-Waterman score: 5527; 100.0% identity (100.0% similar) in 851 aa overlap (1-851:1-851)

               10        20        30        40        50        60
pF1KB7 MSSKQEIMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSSKQEIMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SHSTTEDLKRFYDLSDSDSNLSGEDSKALSQKKIKKKKTQTKKEIDSKNLVEKKKETKKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SHSTTEDLKRFYDLSDSDSNLSGEDSKALSQKKIKKKKTQTKKEIDSKNLVEKKKETKKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKKNIVQHTTDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKKNIVQHTTDSS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 LEEKQRTLDSGTSEIVKSPRIECSKTRREMQSVVQLIMTRDSDGYENSTDGEMCDKDALE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LEEKQRTLDSGTSEIVKSPRIECSKTRREMQSVVQLIMTRDSDGYENSTDGEMCDKDALE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 EDSESVSEIGSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EDSESVSEIGSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 DLARGKGNIETSSEDEDDTADLFPEESGFEHAWRELDKDAPRADEITRRLAVCNMDWDRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DLARGKGNIETSSEDEDDTADLFPEESGFEHAWRELDKDAPRADEITRRLAVCNMDWDRL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 KAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQGPVELLSIPEDAPEKDWTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQGPVELLSIPEDAPEKDWTSR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 EKLRDYQFKRLKYYYAVVDCDSPETASKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EKLRDYQFKRLKYYYAVVDCDSPETASKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 KDVASEVNLTAYKPKYFTSAAMGTSTVEITWDETDHERITMLNRKFKKEELLDMDFQAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KDVASEVNLTAYKPKYFTSAAMGTSTVEITWDETDHERITMLNRKFKKEELLDMDFQAYL
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB7 ASSSEDEEEIEEELQGDDGVNVEEDGKTKKSQKDDEEQIAKYRQLLQVIQEKEKKGKEND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ASSSEDEEEIEEELQGDDGVNVEEDGKTKKSQKDDEEQIAKYRQLLQVIQEKEKKGKEND
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB7 MEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFLEKKKEKKRLKRKQKALAEEASEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFLEKKKEKKRLKRKQKALAEEASEEE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB7 LPSDVDLNDPYFAEEVKQIGINKKSVKSAKDGTSPEEEIEIERQKAEMALLMMDEDEDSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LPSDVDLNDPYFAEEVKQIGINKKSVKSAKDGTSPEEEIEIERQKAEMALLMMDEDEDSK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB7 KHFNYNKIVEHQNLSKKKKKQLMKKKELIEDDFEVNVNDARFQAMYTSHLFNLDPSDPNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KHFNYNKIVEHQNLSKKKKKQLMKKKELIEDDFEVNVNDARFQAMYTSHLFNLDPSDPNF
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB7 KKTKAMEKILEEKARQRERKEQELTQAIKKKESEIEKESQRKSIDPALSMLIKSIKTKTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KKTKAMEKILEEKARQRERKEQELTQAIKKKESEIEKESQRKSIDPALSMLIKSIKTKTE
              790       800       810       820       830       840

              850 
pF1KB7 QFQARKKQKVK
       :::::::::::
CCDS13 QFQARKKQKVK
              850 




851 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:47:03 2016 done: Fri Nov  4 06:47:03 2016
 Total Scan time:  4.710 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]