Result of FASTA (ccds) for
pF1KB7325
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7325, 1649 aa
1>>>pF1KB7325 1649 - 1649 aa - 1649 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.5910+/-0.0015; mu= -15.3451+/- 0.087
mean_var=564.0191+/-129.753, 0's: 0 Z-trim(109.7): 78 B-trim: 645 in 1/51
Lambda= 0.054004
statistics sampled from 11024 (11074) to 11024 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.34), width: 16
Scan time: 6.390
The best scores are: opt bits E(32554)
CCDS42016.1 EIF2AK4 gene_id:440275|Hs108|chr15 (1649) 10902 866.5 0
>>CCDS42016.1 EIF2AK4 gene_id:440275|Hs108|chr15 (1649 aa)
initn: 10902 init1: 10902 opt: 10902 Z-score: 4613.0 bits: 866.5 E(32554): 0
Smith-Waterman score: 10902; 100.0% identity (100.0% similar) in 1649 aa overlap (1-1649:1-1649)
10 20 30 40 50 60
pF1KB7 MAGGRGAPGRGRDEPPESYPQRQDHELQALEAIYGADFQDLRPDACGPVKEPPEINLVLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGGRGAPGRGRDEPPESYPQRQDHELQALEAIYGADFQDLRPDACGPVKEPPEINLVLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQGLTGEEVYVKVDLRVKCPPTYPDVVPEIELKNAKGLSNESVNLLKSRLEELAKKHCGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PQGLTGEEVYVKVDLRVKCPPTYPDVVPEIELKNAKGLSNESVNLLKSRLEELAKKHCGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VMIFELAYHVQSFLSEHNKPPPKSFHEEMLERRAQEEQQRLLEAKRKEEQEQREILHEIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VMIFELAYHVQSFLSEHNKPPPKSFHEEMLERRAQEEQQRLLEAKRKEEQEQREILHEIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGGHRTAAILHGGSPDFVGNGKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGGHRTAAILHGGSPDFVGNGKHR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 ANSSGRSRRERQYSVCNSEDSPGSCEILYFNMGSPDQLMVHKGKCIGSDEQLGKLVYNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ANSSGRSRRERQYSVCNSEDSPGSCEILYFNMGSPDQLMVHKGKCIGSDEQLGKLVYNAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 ETATGGFVLLYEWVLQWQKKMGPFLTSQEKEKIDKCKKQIQGTETEFNSLVKLSHPNVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ETATGGFVLLYEWVLQWQKKMGPFLTSQEKEKIDKCKKQIQGTETEFNSLVKLSHPNVVR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 YLAMNLKEQDDSIVVDILVEHISGVSLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YLAMNLKEQDDSIVVDILVEHISGVSLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 VVHKVLSASNVLVDAEGTVKITDYSISKRLADICKEDVFEQTRVRFSDNALPYKTGKKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VVHKVLSASNVLVDAEGTVKITDYSISKRLADICKEDVFEQTRVRFSDNALPYKTGKKGD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 VWRLGLLLLSLSQGQECGEYPVTIPSDLPADFQDFLKKCVCLDDKERWSPQQLLKHSFIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VWRLGLLLLSLSQGQECGEYPVTIPSDLPADFQDFLKKCVCLDDKERWSPQQLLKHSFIN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 PQPKMPLVEQSPEDSEGQDYVETVIPSNRLPSAAFFSETQRQFSRYFIEFEELQLLGKGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PQPKMPLVEQSPEDSEGQDYVETVIPSNRLPSAAFFSETQRQFSRYFIEFEELQLLGKGA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 FGAVIKVQNKLDGCCYAVKRIPINPASRQFRRIKGEVTLLSRLHHENIVRYYNAWIERHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FGAVIKVQNKLDGCCYAVKRIPINPASRQFRRIKGEVTLLSRLHHENIVRYYNAWIERHE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 RPAGPGTPPPDSGPLAKDDRAARGQPASDTDGLDSVEAAAPPPILSSSVEWSTSGERSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RPAGPGTPPPDSGPLAKDDRAARGQPASDTDGLDSVEAAAPPPILSSSVEWSTSGERSAS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 ARFPATGPGSSDDEDDDEDEHGGVFSQSFLPASDSESDIIFDNEDENSKSQNQDEDCNEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ARFPATGPGSSDDEDDDEDEHGGVFSQSFLPASDSESDIIFDNEDENSKSQNQDEDCNEK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB7 NGCHESEPSVTTEAVHYLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NGCHESEPSVTTEAVHYLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIH
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB7 EKGMIHRDLKPVNIFLDSDDHVKIGDFGLATDHLAFSADSKQDDQTGDLIKSDPSGHLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKGMIHRDLKPVNIFLDSDDHVKIGDFGLATDHLAFSADSKQDDQTGDLIKSDPSGHLTG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB7 MVGTALYVSPEVQGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MVGTALYVSPEVQGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB7 KFPEDFDDGEHAKQKSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KFPEDFDDGEHAKQKSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB7 NVDGKAYRTMMAQIFSQRISPAIDYTYDSDILKGNFSIRTAKMQQHVCETIIRIFKRHGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NVDGKAYRTMMAQIFSQRISPAIDYTYDSDILKGNFSIRTAKMQQHVCETIIRIFKRHGA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB7 VQLCTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VQLCTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB7 RVFRPRKLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RVFRPRKLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB7 NHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKF
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB7 IEQKGDLQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IEQKGDLQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYK
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB7 VQQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VQQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDK
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB7 ISAAVLNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ISAAVLNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB7 EYCRHHEITYVALVSDKEGSHVKVKSFEKERQTEKRVLETELVDHVLQKLRTKVTDERNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EYCRHHEITYVALVSDKEGSHVKVKSFEKERQTEKRVLETELVDHVLQKLRTKVTDERNG
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB7 REASDNLAVQNLKGSFSNASGLFEIHGATVVPIVSVLAPEKLSASTRRRYETQVQTRLQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 REASDNLAVQNLKGSFSNASGLFEIHGATVVPIVSVLAPEKLSASTRRRYETQVQTRLQT
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KB7 SLANLHQKSSEIEILAVDLPKETILQFLSLEWDADEQAFNTTVKQLLSRLPKQRYLKLVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLANLHQKSSEIEILAVDLPKETILQFLSLEWDADEQAFNTTVKQLLSRLPKQRYLKLVC
1570 1580 1590 1600 1610 1620
1630 1640
pF1KB7 DEIYNIKVEKKVSVLFLYSYRDDYYRILF
:::::::::::::::::::::::::::::
CCDS42 DEIYNIKVEKKVSVLFLYSYRDDYYRILF
1630 1640
1649 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:43:01 2016 done: Sat Nov 5 02:43:02 2016
Total Scan time: 6.390 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]