Result of FASTA (ccds) for
pF1KB7345
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7345, 2223 aa
1>>>pF1KB7345 2223 - 2223 aa - 2223 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3323+/-0.00114; mu= 12.4910+/- 0.069
mean_var=187.1578+/-36.854, 0's: 0 Z-trim(108.5): 28 B-trim: 3 in 1/53
Lambda= 0.093750
statistics sampled from 10272 (10276) to 10272 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.316), width: 16
Scan time: 7.610
The best scores are: opt bits E(32554)
CCDS899.1 SPAG17 gene_id:200162|Hs108|chr1 (2223) 14631 1993.2 0
>>CCDS899.1 SPAG17 gene_id:200162|Hs108|chr1 (2223 aa)
initn: 14631 init1: 14631 opt: 14631 Z-score: 10697.7 bits: 1993.2 E(32554): 0
Smith-Waterman score: 14631; 100.0% identity (100.0% similar) in 2223 aa overlap (1-2223:1-2223)
10 20 30 40 50 60
pF1KB7 MAPKKEKGGTVNTSSKIWEPSLIAAQFNQNDWQASIAFVVGNQIEDDLLIQALTVAVQVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MAPKKEKGGTVNTSSKIWEPSLIAAQFNQNDWQASIAFVVGNQIEDDLLIQALTVAVQVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QRKLFSMVSWQDILQQINEINTLVGSASSKKAKKPVGGNAPLYYEVLTAAKAIMDSGEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QRKLFSMVSWQDILQQINEINTLVGSASSKKAKKPVGGNAPLYYEVLTAAKAIMDSGEKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TLPLIGKLLKFQLLQIKFKDQQRRENEKKVIEDKPKLEKDKGKAKSPKEKKAPSAKPAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 TLPLIGKLLKFQLLQIKFKDQQRRENEKKVIEDKPKLEKDKGKAKSPKEKKAPSAKPAKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 KGKDQPEANAPVKKTTQLKRRGEDDHTNRYIDDEPDDGAQHYIIVVGFNNPQLLAIMAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KGKDQPEANAPVKKTTQLKRRGEDDHTNRYIDDEPDDGAQHYIIVVGFNNPQLLAIMAEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GIPITSVIKISSENYEPLQTHLAAVNQQQEVLLQSEDLEAEKLKKENAIKELKTFWKYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GIPITSVIKISSENYEPLQTHLAAVNQQQEVLLQSEDLEAEKLKKENAIKELKTFWKYLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PVLNNEKPETNLFDVARLEYMVKAADFPSDWSDGEMMLKLGTDIFENIACLMYDILDWKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 PVLNNEKPETNLFDVARLEYMVKAADFPSDWSDGEMMLKLGTDIFENIACLMYDILDWKR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QHQHYLESMQLINVPQVVNEKPVLEAMPTSEAPQPAVPAPGKKKAQYEEPQAPPPVTSVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QHQHYLESMQLINVPQVVNEKPVLEAMPTSEAPQPAVPAPGKKKAQYEEPQAPPPVTSVI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 TTEVDMRYYNYLLNPIREEFISVPLILHCMLEQVVATEEDLVPPSLREPSPRADGLDHRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 TTEVDMRYYNYLLNPIREEFISVPLILHCMLEQVVATEEDLVPPSLREPSPRADGLDHRI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 AAHIVSLLPSLCLSEREKKNLHDIFLSEEENESKAVPKGPLLLNYHDAHAHKKYALQDQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 AAHIVSLLPSLCLSEREKKNLHDIFLSEEENESKAVPKGPLLLNYHDAHAHKKYALQDQK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 NFDPVQIEQEMQSKLPLWEFLQFPLPPPWNNTKRLATIHELMHFCTSDVLSWNEVERAFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 NFDPVQIEQEMQSKLPLWEFLQFPLPPPWNNTKRLATIHELMHFCTSDVLSWNEVERAFK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 VFTFESLKLSEVDEKGKLKPSGMMCGSDSEMFNIPWDNPARFAKQIRQQYVMKMNTQEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 VFTFESLKLSEVDEKGKLKPSGMMCGSDSEMFNIPWDNPARFAKQIRQQYVMKMNTQEAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 QKADIKIKDRTLFVDQNLSMSVQDNESNREPSDPSQCDANNMKHSDLNNLKLSVPDNRQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QKADIKIKDRTLFVDQNLSMSVQDNESNREPSDPSQCDANNMKHSDLNNLKLSVPDNRQL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 LEQESIMKAQPQHESLEQTTNNEIKDDAVTKADSHEKKPKKMMVEADLEDIKKTQQRSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 LEQESIMKAQPQHESLEQTTNNEIKDDAVTKADSHEKKPKKMMVEADLEDIKKTQQRSLM
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB7 DWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRLHCEYWNIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 DWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRLHCEYWNIAL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB7 HSNVGFRNYLELVAKSIQDWITKEEAIYQESKMNEKIIRTRAELELKSSANAKLTSASKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 HSNVGFRNYLELVAKSIQDWITKEEAIYQESKMNEKIIRTRAELELKSSANAKLTSASKI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB7 FSIKESKSNKGISKTEISDQEKEKEKEKIPFILEGSLKAWKEEQHRLAEEERLREEKKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 FSIKESKSNKGISKTEISDQEKEKEKEKIPFILEGSLKAWKEEQHRLAEEERLREEKKAE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB7 KKGKEAGKKKGKDNAEKEDSRSLKKKSPYKEKSKEEQVKIQEVTEESPHQPEPKITYPFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KKGKEAGKKKGKDNAEKEDSRSLKKKSPYKEKSKEEQVKIQEVTEESPHQPEPKITYPFH
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB7 GYNMGNIPTQISGSNYYLYPSDGGQIEVEKTMFEKGPTFIKVRVVKDNHNFMIHLNDPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GYNMGNIPTQISGSNYYLYPSDGGQIEVEKTMFEKGPTFIKVRVVKDNHNFMIHLNDPKE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB7 IVKKEEKGDYYLEEEEEGDEEQSLETEVSDAKNKAFSKFGSFSATLENGICLSISYYGSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 IVKKEEKGDYYLEEEEEGDEEQSLETEVSDAKNKAFSKFGSFSATLENGICLSISYYGSN
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB7 GMAPEDKDPDLETILNIPSALTPTVVPVIVTVPQSKAKGKIKGKEKPKESLKEEEHPKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GMAPEDKDPDLETILNIPSALTPTVVPVIVTVPQSKAKGKIKGKEKPKESLKEEEHPKEE
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB7 EKKEEEVEPEPVLQETLDVPTFQSLNVSCPSGLLLTFIGQESTGQYVIDEEPTWDIMVRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 EKKEEEVEPEPVLQETLDVPTFQSLNVSCPSGLLLTFIGQESTGQYVIDEEPTWDIMVRQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB7 SYPQRVKHYEFYKTVMPPAEQEASRVITSQGTVVKYMLDGSTQILFADGAVSRSPNSGLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SYPQRVKHYEFYKTVMPPAEQEASRVITSQGTVVKYMLDGSTQILFADGAVSRSPNSGLI
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB7 CPPSEMPATPHSGDLMDSISQQKSETIPSEITNTKKGKSHKSQSSMAHKGEIHDPPPEAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 CPPSEMPATPHSGDLMDSISQQKSETIPSEITNTKKGKSHKSQSSMAHKGEIHDPPPEAV
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB7 QTVTPVEVHIGTWFTTTPEGNRIGTKGLERIADLTPLLSFQATDPVNGTVMTTREDKVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QTVTPVEVHIGTWFTTTPEGNRIGTKGLERIADLTPLLSFQATDPVNGTVMTTREDKVVI
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB7 VERKDGTRIVDHADGTRITTFYQVYEDQIILPDDQETTEGPRTVTRQVKCMRVESSRYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 VERKDGTRIVDHADGTRITTFYQVYEDQIILPDDQETTEGPRTVTRQVKCMRVESSRYAT
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB7 VIANCEDSSCCATFGDGTTIIAKPQGTYQVLPPNTGSLYIDKDCSAVYCHESSSNIYYPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 VIANCEDSSCCATFGDGTTIIAKPQGTYQVLPPNTGSLYIDKDCSAVYCHESSSNIYYPF
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KB7 QKREQLRAGRYIMRHTSEVICEVLDPEGNTFQVMADGSISTILPEKKLEDDLNEKTEGYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QKREQLRAGRYIMRHTSEVICEVLDPEGNTFQVMADGSISTILPEKKLEDDLNEKTEGYD
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KB7 SLSSMHLEKNHQQIYGEHVPRFFVMYADGSGMELLRDSDIEEYLSLAYKESNTVVLQEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SLSSMHLEKNHQQIYGEHVPRFFVMYADGSGMELLRDSDIEEYLSLAYKESNTVVLQEPV
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KB7 QEQPGTLTITVLRPFHEASPWQVKKEDTIVPPNLRSRSWETFPSVEKKTPGPPFGTQIWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QEQPGTLTITVLRPFHEASPWQVKKEDTIVPPNLRSRSWETFPSVEKKTPGPPFGTQIWK
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KB7 GLCIESKQLVSAPGAILKSPSVLQMRQFIQHEVIKNEVKLRLQVSLKDYINYILKKEDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GLCIESKQLVSAPGAILKSPSVLQMRQFIQHEVIKNEVKLRLQVSLKDYINYILKKEDEL
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KB7 QEMMVKDSRTEEERGNAADLLKLVMSFPKMEETTKSHVTEVAAHLTDLFKQSLATPPKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QEMMVKDSRTEEERGNAADLLKLVMSFPKMEETTKSHVTEVAAHLTDLFKQSLATPPKCP
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KB7 PDTFGKDFFEKTWRHTASSKRWKEKIDKTRKEIETTQNYLMDIKNRIIPPFFKSELNQLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 PDTFGKDFFEKTWRHTASSKRWKEKIDKTRKEIETTQNYLMDIKNRIIPPFFKSELNQLY
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KB7 QSQYNHLDSLSKKLPSFTKKNEDANETAVQDTSDLNLDFKPHKVSEQKSSSVPSLPKPEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QSQYNHLDSLSKKLPSFTKKNEDANETAVQDTSDLNLDFKPHKVSEQKSSSVPSLPKPEI
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KB7 SADKKDFTAQNQTENLTKSPEEAESYEPVKIPTQSLLQDVAGQTRKEKVKLPHYLLSSKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SADKKDFTAQNQTENLTKSPEEAESYEPVKIPTQSLLQDVAGQTRKEKVKLPHYLLSSKP
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KB7 KSQPLAKVQDSVGGKVNTSSVASAAINNAKSSLFGFHLLPSSVKFGVLKEGHTYATVVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KSQPLAKVQDSVGGKVNTSSVASAAINNAKSSLFGFHLLPSSVKFGVLKEGHTYATVVKL
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KB7 KNVGVDFCRFKVKQPPPSTGLKVTYKPGPVAAGMQTELNIELFATAVGEDGAKGSAHISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KNVGVDFCRFKVKQPPPSTGLKVTYKPGPVAAGMQTELNIELFATAVGEDGAKGSAHISH
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KB7 NIEIMTEHEVLFLPVEATVLTSSNYDKRPKDFPQGKENPMVQRTSTIYSSTLGVFMSRKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 NIEIMTEHEVLFLPVEATVLTSSNYDKRPKDFPQGKENPMVQRTSTIYSSTLGVFMSRKV
2170 2180 2190 2200 2210 2220
pF1KB7 SPH
:::
CCDS89 SPH
2223 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:33:35 2016 done: Sat Nov 5 13:33:37 2016
Total Scan time: 7.610 Total Display time: 0.250
Function used was FASTA [36.3.4 Apr, 2011]