Result of FASTA (ccds) for
pF1KB7381
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7381, 462 aa
1>>>pF1KB7381 462 - 462 aa - 462 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2536+/-0.000871; mu= 1.2865+/- 0.052
mean_var=244.3157+/-49.439, 0's: 0 Z-trim(115.4): 16 B-trim: 167 in 1/50
Lambda= 0.082054
statistics sampled from 15999 (16010) to 15999 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.492), width: 16
Scan time: 4.000
The best scores are: opt bits E(32554)
CCDS45510.1 HSF4 gene_id:3299|Hs108|chr16 ( 462) 3168 387.7 1.3e-107
CCDS42175.1 HSF4 gene_id:3299|Hs108|chr16 ( 492) 1679 211.5 1.6e-54
CCDS6419.1 HSF1 gene_id:3297|Hs108|chr8 ( 529) 890 118.1 2.2e-26
CCDS47470.1 HSF2 gene_id:3298|Hs108|chr6 ( 518) 649 89.6 8.6e-18
CCDS5124.1 HSF2 gene_id:3298|Hs108|chr6 ( 536) 649 89.6 8.8e-18
>>CCDS45510.1 HSF4 gene_id:3299|Hs108|chr16 (462 aa)
initn: 3168 init1: 3168 opt: 3168 Z-score: 2045.2 bits: 387.7 E(32554): 1.3e-107
Smith-Waterman score: 3168; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP
370 380 390 400 410 420
430 440 450 460
pF1KB7 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
430 440 450 460
>>CCDS42175.1 HSF4 gene_id:3299|Hs108|chr16 (492 aa)
initn: 2850 init1: 1679 opt: 1679 Z-score: 1092.2 bits: 211.5 E(32554): 1.6e-54
Smith-Waterman score: 2803; 87.6% identity (90.2% similar) in 492 aa overlap (1-462:1-492)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
190 200 210 220 230 240
250 260 270 280
pF1KB7 IQSP---STYSLSQRQ-----IWALALTGPG------APSSL-TSQKTLHPLR----GPG
:::: .. .:: .. : . .:. .::: .: : :. .::
CCDS42 IQSPLPETNLGLSPHRARGPIISDIPEDSPSPEGTRLSPSSDGRREKGLALLKEEPASPG
250 260 270 280 290 300
290 300 310 320 330
pF1KB7 -------FLPP----VMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD
: : . :::::::::::::::::::::::::::::::::::::::::
CCDS42 GDGEAGLALAPNECDFCVTAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT
430 440 450 460 470 480
460
pF1KB7 ASYLGPEASPSP
::::::::::::
CCDS42 ASYLGPEASPSP
490
>>CCDS6419.1 HSF1 gene_id:3297|Hs108|chr8 (529 aa)
initn: 728 init1: 587 opt: 890 Z-score: 587.0 bits: 118.1 E(32554): 2.2e-26
Smith-Waterman score: 902; 39.1% identity (58.6% similar) in 471 aa overlap (9-423:7-475)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
CCDS64 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
CCDS64 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
CCDS64 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
CCDS64 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPG---------FLPPVM
:: ::. : : :.: .:: :..: :. .:: : :
CCDS64 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDERPLSSSPLVR
240 250 260 270 280 290
290 300 310 320 330
pF1KB7 AGAPPPLPVAV--VQAILEGKGS-----FSPEGPRNA----QQPEPGDPREIPD-RGPLG
. :: : :. :. : .:: . .. ..: :.. . : ::
CCDS64 VKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTD
300 310 320 330 340 350
340 350 360
pF1KB7 LESGDRSPESLLPP-----------------------------MLLQPPQESVEPAGPLD
:. :: : .:. ::. .. ::
CCDS64 TEGRPPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLD
360 370 380 390 400 410
370 380 390 400 410 420
pF1KB7 VLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPT--LGAPLLLD
...::. . .: ::: :. .: :. . :. .::. ::. . . ::.:
CCDS64 LFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLL
420 430 440 450 460 470
430 440 450 460
pF1KB7 VQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
CCDS64 DPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
480 490 500 510 520
>>CCDS47470.1 HSF2 gene_id:3298|Hs108|chr6 (518 aa)
initn: 630 init1: 630 opt: 649 Z-score: 432.9 bits: 89.6 E(32554): 8.6e-18
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (15-214:5-203)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
CCDS47 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
10 20 30 40 50
70 80 90 100 110
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
CCDS47 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
CCDS47 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
::..:: :..: . .: . .. ::: :.:.
CCDS47 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
CCDS47 PHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVE
230 240 250 260 270 280
>>CCDS5124.1 HSF2 gene_id:3298|Hs108|chr6 (536 aa)
initn: 625 init1: 625 opt: 649 Z-score: 432.7 bits: 89.6 E(32554): 8.8e-18
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (15-214:5-203)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
CCDS51 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
10 20 30 40 50
70 80 90 100 110
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
CCDS51 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
CCDS51 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
::..:: :..: . .: . .. ::: :.:.
CCDS51 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
CCDS51 PHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVE
230 240 250 260 270 280
462 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:03:59 2016 done: Fri Nov 4 07:04:00 2016
Total Scan time: 4.000 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]