Result of FASTA (omim) for
pF1KB7381
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7381, 462 aa
1>>>pF1KB7381 462 - 462 aa - 462 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2362+/-0.000351; mu= 1.3600+/- 0.022
mean_var=264.1458+/-54.270, 0's: 0 Z-trim(123.2): 42 B-trim: 403 in 1/52
Lambda= 0.078914
statistics sampled from 42597 (42643) to 42597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.5), width: 16
Scan time: 12.190
The best scores are: opt bits E(85289)
NP_001529 (OMIM: 116800,602438) heat shock factor ( 462) 3168 373.6 6.2e-103
NP_001035757 (OMIM: 116800,602438) heat shock fact ( 492) 1679 204.1 7e-52
XP_016868866 (OMIM: 140580) PREDICTED: heat shock ( 489) 890 114.3 7.7e-25
XP_005272373 (OMIM: 140580) PREDICTED: heat shock ( 517) 890 114.3 8e-25
NP_005517 (OMIM: 140580) heat shock factor protein ( 529) 890 114.3 8.1e-25
XP_005272372 (OMIM: 140580) PREDICTED: heat shock ( 557) 890 114.3 8.4e-25
XP_005272374 (OMIM: 140580) PREDICTED: heat shock ( 310) 876 112.5 1.7e-24
NP_001230023 (OMIM: 140581) heat shock factor prot ( 230) 649 86.5 8e-17
NP_001129036 (OMIM: 140581) heat shock factor prot ( 518) 649 86.9 1.5e-16
NP_004497 (OMIM: 140581) heat shock factor protein ( 536) 649 86.9 1.5e-16
>>NP_001529 (OMIM: 116800,602438) heat shock factor prot (462 aa)
initn: 3168 init1: 3168 opt: 3168 Z-score: 1968.9 bits: 373.6 E(85289): 6.2e-103
Smith-Waterman score: 3168; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVVQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQESVE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAP
370 380 390 400 410 420
430 440 450 460
pF1KB7 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
::::::::::::::::::::::::::::::::::::::::::
NP_001 LLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
430 440 450 460
>>NP_001035757 (OMIM: 116800,602438) heat shock factor p (492 aa)
initn: 2850 init1: 1679 opt: 1679 Z-score: 1052.4 bits: 204.1 E(85289): 7e-52
Smith-Waterman score: 2803; 87.6% identity (90.2% similar) in 492 aa overlap (1-462:1-492)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYF
190 200 210 220 230 240
250 260 270 280
pF1KB7 IQSP---STYSLSQRQ-----IWALALTGPG------APSSL-TSQKTLHPLR----GPG
:::: .. .:: .. : . .:. .::: .: : :. .::
NP_001 IQSPLPETNLGLSPHRARGPIISDIPEDSPSPEGTRLSPSSDGRREKGLALLKEEPASPG
250 260 270 280 290 300
290 300 310 320 330
pF1KB7 -------FLPP----VMAGAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD
: : . :::::::::::::::::::::::::::::::::::::::::
NP_001 GDGEAGLALAPNECDFCVTAPPPLPVAVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPD
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQ
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRT
430 440 450 460 470 480
460
pF1KB7 ASYLGPEASPSP
::::::::::::
NP_001 ASYLGPEASPSP
490
>>XP_016868866 (OMIM: 140580) PREDICTED: heat shock fact (489 aa)
initn: 715 init1: 587 opt: 890 Z-score: 567.0 bits: 114.3 E(85289): 7.7e-25
Smith-Waterman score: 903; 38.9% identity (59.8% similar) in 483 aa overlap (9-451:7-486)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
XP_016 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
XP_016 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
XP_016 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
XP_016 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPG---------FLPPVM
:: ::. : : :.: .:: :..: :. .:: : :
XP_016 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDERPLSSSPLVR
240 250 260 270 280 290
290 300 310 320 330
pF1KB7 AGAPPPLPVAV--VQAILEGKGS-----FSPEGPRNA----QQPEPGDPREIPD-RGPLG
. :: : :. :. : .:: . .. ..: :.. . : ::
XP_016 VKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTD
300 310 320 330 340 350
340 350 360 370 380
pF1KB7 LESGDRSPESLLPPM--LLQPPQESVEPAGPLDVLGPSLQGREWTL------MDLDMELS
:. :: : : .. : . ::.. .:.. . : .: . :.
XP_016 TEGRPPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLD
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB7 LMQP--LVPERGEPEL-----AVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGAL
:..: ::. . :.: ... : ::. : . : .:: . : ..:..
XP_016 LFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSAGALHSAA-AVPAGP
420 430 440 450 460 470
450 460
pF1KB7 TIYSTPESRTASYLGPEASPSP
. . :.: :
XP_016 RLRGHREQRPAGAV
480
>>XP_005272373 (OMIM: 140580) PREDICTED: heat shock fact (517 aa)
initn: 715 init1: 587 opt: 890 Z-score: 566.7 bits: 114.3 E(85289): 8e-25
Smith-Waterman score: 890; 46.5% identity (68.0% similar) in 325 aa overlap (9-328:7-321)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
XP_005 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
XP_005 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
XP_005 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPV
:: ::. : : :.: .:: :..: :. .:: :. :.
XP_005 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPG-------GSIDERPL
240 250 260 270 280
300 310 320 330 340 350
pF1KB7 AVVQAI-LEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPP
. . .. . :..:: ... :: : .
XP_005 SSSPLVRVKEEPPSPPQSPR-VEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTAL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 QESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDP
XP_005 TDARGHTDTEGRPPSPPPTSTPEKCLSVACLDNLARTPQMSRVARLFPCPSSSPHGQVQP
350 360 370 380 390 400
>>NP_005517 (OMIM: 140580) heat shock factor protein 1 [ (529 aa)
initn: 728 init1: 587 opt: 890 Z-score: 566.5 bits: 114.3 E(85289): 8.1e-25
Smith-Waterman score: 902; 39.1% identity (58.6% similar) in 471 aa overlap (9-423:7-475)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
NP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
NP_005 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
NP_005 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
NP_005 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPG---------FLPPVM
:: ::. : : :.: .:: :..: :. .:: : :
NP_005 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDERPLSSSPLVR
240 250 260 270 280 290
290 300 310 320 330
pF1KB7 AGAPPPLPVAV--VQAILEGKGS-----FSPEGPRNA----QQPEPGDPREIPD-RGPLG
. :: : :. :. : .:: . .. ..: :.. . : ::
NP_005 VKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTD
300 310 320 330 340 350
340 350 360
pF1KB7 LESGDRSPESLLPP-----------------------------MLLQPPQESVEPAGPLD
:. :: : .:. ::. .. ::
NP_005 TEGRPPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLD
360 370 380 390 400 410
370 380 390 400 410 420
pF1KB7 VLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPT--LGAPLLLD
...::. . .: ::: :. .: :. . :. .::. ::. . . ::.:
NP_005 LFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLL
420 430 440 450 460 470
430 440 450 460
pF1KB7 VQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
NP_005 DPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
480 490 500 510 520
>>XP_005272372 (OMIM: 140580) PREDICTED: heat shock fact (557 aa)
initn: 728 init1: 587 opt: 890 Z-score: 566.2 bits: 114.3 E(85289): 8.4e-25
Smith-Waterman score: 890; 46.5% identity (68.0% similar) in 325 aa overlap (9-328:7-321)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
XP_005 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
XP_005 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
XP_005 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPV
:: ::. : : :.: .:: :..: :. .:: :. :.
XP_005 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPG-------GSIDERPL
240 250 260 270 280
300 310 320 330 340 350
pF1KB7 AVVQAI-LEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPP
. . .. . :..:: ... :: : .
XP_005 SSSPLVRVKEEPPSPPQSPR-VEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTAL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 QESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDP
XP_005 TDARGHTDTEGRPPSPPPTSTPEKCLSVACLDNLARTPQMSRVARLFPCPSSSPHGQVQP
350 360 370 380 390 400
>>XP_005272374 (OMIM: 140580) PREDICTED: heat shock fact (310 aa)
initn: 662 init1: 587 opt: 876 Z-score: 561.0 bits: 112.5 E(85289): 1.7e-24
Smith-Waterman score: 876; 51.6% identity (72.2% similar) in 277 aa overlap (9-281:7-281)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
XP_005 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
XP_005 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
XP_005 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPV
:: ::. : : :.: .:: :..: :. .::
XP_005 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDESPHGRQGPHG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 AVVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQ
XP_005 HRGPASLPPAHLHP
300 310
>>NP_001230023 (OMIM: 140581) heat shock factor protein (230 aa)
initn: 625 init1: 625 opt: 649 Z-score: 423.0 bits: 86.5 E(85289): 8e-17
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (15-214:5-203)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
NP_001 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
10 20 30 40 50
70 80 90 100 110
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
NP_001 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
NP_001 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
::..:: :..: . .: . .. ::: :.:.
NP_001 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
NP_001 IF
230
>>NP_001129036 (OMIM: 140581) heat shock factor protein (518 aa)
initn: 630 init1: 630 opt: 649 Z-score: 418.4 bits: 86.9 E(85289): 1.5e-16
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (15-214:5-203)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
NP_001 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
10 20 30 40 50
70 80 90 100 110
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
NP_001 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
NP_001 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
::..:: :..: . .: . .. ::: :.:.
NP_001 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
NP_001 PHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVE
230 240 250 260 270 280
>>NP_004497 (OMIM: 140581) heat shock factor protein 2 i (536 aa)
initn: 625 init1: 625 opt: 649 Z-score: 418.2 bits: 86.9 E(85289): 1.5e-16
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (15-214:5-203)
10 20 30 40 50 60
pF1KB7 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
NP_004 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
10 20 30 40 50
70 80 90 100 110
pF1KB7 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
NP_004 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
NP_004 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
::..:: :..: . .: . .. ::: :.:.
NP_004 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
NP_004 PHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVE
230 240 250 260 270 280
462 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:04:00 2016 done: Fri Nov 4 07:04:02 2016
Total Scan time: 12.190 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]