Result of FASTA (omim) for
pF1KB7389
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7389, 205 aa
1>>>pF1KB7389 205 - 205 aa - 205 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4935+/-0.000359; mu= 17.1563+/- 0.022
mean_var=55.0872+/-11.184, 0's: 0 Z-trim(113.3): 36 B-trim: 683 in 1/52
Lambda= 0.172802
statistics sampled from 22539 (22575) to 22539 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.265), width: 16
Scan time: 5.890
The best scores are: opt bits E(85289)
XP_016867686 (OMIM: 612550) PREDICTED: tripartite ( 185) 1026 263.6 1.4e-70
NP_001269647 (OMIM: 608489,615723) cohesin subunit (1167) 634 166.5 1.6e-40
XP_016867176 (OMIM: 608489,615723) PREDICTED: cohe (1180) 634 166.5 1.6e-40
NP_036579 (OMIM: 608489,615723) cohesin subunit SA (1225) 634 166.5 1.6e-40
NP_001269645 (OMIM: 608489,615723) cohesin subunit (1225) 634 166.5 1.6e-40
XP_011514044 (OMIM: 608489,615723) PREDICTED: cohe (1226) 634 166.5 1.6e-40
NP_001269646 (OMIM: 608489,615723) cohesin subunit (1226) 634 166.5 1.6e-40
XP_016867175 (OMIM: 608489,615723) PREDICTED: cohe (1238) 634 166.5 1.6e-40
XP_016867172 (OMIM: 608489,615723) PREDICTED: cohe (1239) 634 166.5 1.6e-40
XP_016867174 (OMIM: 608489,615723) PREDICTED: cohe (1239) 634 166.5 1.6e-40
XP_016867173 (OMIM: 608489,615723) PREDICTED: cohe (1239) 634 166.5 1.6e-40
XP_016861013 (OMIM: 604358) PREDICTED: cohesin sub (1032) 476 127.1 1e-28
XP_011510633 (OMIM: 604358) PREDICTED: cohesin sub (1121) 476 127.1 1.1e-28
XP_011510631 (OMIM: 604358) PREDICTED: cohesin sub (1121) 476 127.1 1.1e-28
XP_016861012 (OMIM: 604358) PREDICTED: cohesin sub (1121) 476 127.1 1.1e-28
NP_005853 (OMIM: 604358) cohesin subunit SA-1 [Hom (1258) 476 127.1 1.2e-28
XP_016884724 (OMIM: 300826) PREDICTED: cohesin sub (1199) 473 126.4 1.9e-28
XP_006724791 (OMIM: 300826) PREDICTED: cohesin sub (1199) 473 126.4 1.9e-28
XP_005262418 (OMIM: 300826) PREDICTED: cohesin sub (1231) 473 126.4 2e-28
XP_016884723 (OMIM: 300826) PREDICTED: cohesin sub (1231) 473 126.4 2e-28
NP_001269347 (OMIM: 300826) cohesin subunit SA-2 i (1231) 473 126.4 2e-28
NP_001036216 (OMIM: 300826) cohesin subunit SA-2 i (1231) 473 126.4 2e-28
NP_006594 (OMIM: 300826) cohesin subunit SA-2 isof (1231) 473 126.4 2e-28
XP_016884722 (OMIM: 300826) PREDICTED: cohesin sub (1231) 473 126.4 2e-28
XP_016884721 (OMIM: 300826) PREDICTED: cohesin sub (1231) 473 126.4 2e-28
XP_011529555 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
XP_005262417 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
NP_001036214 (OMIM: 300826) cohesin subunit SA-2 i (1268) 473 126.4 2e-28
NP_001036215 (OMIM: 300826) cohesin subunit SA-2 i (1268) 473 126.4 2e-28
XP_006724790 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
XP_005262415 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
XP_005262416 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
XP_005262414 (OMIM: 300826) PREDICTED: cohesin sub (1268) 473 126.4 2e-28
XP_016861014 (OMIM: 604358) PREDICTED: cohesin sub ( 821) 203 58.9 2.6e-08
>>XP_016867686 (OMIM: 612550) PREDICTED: tripartite moti (185 aa)
initn: 1026 init1: 1026 opt: 1026 Z-score: 1388.0 bits: 263.6 E(85289): 1.4e-70
Smith-Waterman score: 1026; 99.4% identity (100.0% similar) in 154 aa overlap (1-154:1-154)
10 20 30 40 50 60
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIFSMLRKLPKVTCRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 RVKCVKALKGLYGNRDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILKLFYP
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
XP_016 RVKCVKALKGLYGNRDLTARLELFTGRFKDWMVSMIMDREYSVAVEAVRLLILILKLFYP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQLKDWEGL
::::::::::::::::::::::::::::::::::
XP_016 ECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKSAMTWILRTNRPRAYLAPKHQAPLGL
130 140 150 160 170 180
190 200
pF1KB7 TSLLLEKDQSTCHMEPGPGTFHLLG
XP_016 QLLLG
>>NP_001269647 (OMIM: 608489,615723) cohesin subunit SA- (1167 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.7 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:242-467)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
NP_001 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
NP_001 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
280 290 300 310 320 330
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
NP_001 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
340 350 360 370 380 390
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
NP_001 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
400 410 420 430 440 450
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
NP_001 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
460 470 480 490 500 510
>>XP_016867176 (OMIM: 608489,615723) PREDICTED: cohesin (1180 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.6 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:242-467)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
XP_016 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
XP_016 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
280 290 300 310 320 330
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
XP_016 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
340 350 360 370 380 390
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
XP_016 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
400 410 420 430 440 450
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
XP_016 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
460 470 480 490 500 510
>>NP_036579 (OMIM: 608489,615723) cohesin subunit SA-3 i (1225 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.4 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
NP_036 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
NP_036 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
NP_036 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
NP_036 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
NP_036 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>NP_001269645 (OMIM: 608489,615723) cohesin subunit SA- (1225 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.4 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
NP_001 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
NP_001 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
NP_001 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
NP_001 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
NP_001 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>XP_011514044 (OMIM: 608489,615723) PREDICTED: cohesin (1226 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.4 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
XP_011 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
XP_011 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
XP_011 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
XP_011 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
XP_011 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>NP_001269646 (OMIM: 608489,615723) cohesin subunit SA- (1226 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.4 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
NP_001 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
NP_001 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
NP_001 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
NP_001 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
NP_001 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>XP_016867175 (OMIM: 608489,615723) PREDICTED: cohesin (1238 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.3 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
XP_016 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
XP_016 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
XP_016 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
XP_016 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
XP_016 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>XP_016867172 (OMIM: 608489,615723) PREDICTED: cohesin (1239 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.3 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
XP_016 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
XP_016 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
XP_016 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
XP_016 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
XP_016 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
>>XP_016867174 (OMIM: 608489,615723) PREDICTED: cohesin (1239 aa)
initn: 1103 init1: 633 opt: 634 Z-score: 848.3 bits: 166.5 E(85289): 1.6e-40
Smith-Waterman score: 1030; 73.0% identity (80.1% similar) in 226 aa overlap (1-190:300-525)
10 20 30
pF1KB7 MIFSMLRKLPKVTCRDVLPEIRAICIEEIG
:. ...: . ::::::::::::::::
XP_016 KGPGQRAPERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIG
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB7 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKD
:::::::::::::::::::::::::::::::.::::::::::::::::.::::::.::::
XP_016 CWMQSYSTSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKD
330 340 350 360 370 380
100 110
pF1KB7 WMVSMIVDREYSVAVEAVRLLILILK----------------------------------
::::..::::.::::::::::::::
XP_016 RMVSMVMDREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLY
390 400 410 420 430 440
120 130 140 150 160 170
pF1KB7 --LFYPECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQL
::::::::: :::::::::::::::::::::::::::.::::::::::.::::::..:
XP_016 WKLFYPECEIRMMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARL
450 460 470 480 490 500
180 190 200
pF1KB7 KDWEGLTSLLLEKDQSTCHMEPGPGTFHLLG
:::::::::::::::.
XP_016 KDWEGLTSLLLEKDQNLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ
510 520 530 540 550 560
205 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:08:19 2016 done: Fri Nov 4 07:08:20 2016
Total Scan time: 5.890 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]