Result of FASTA (ccds) for
pF1KB7430
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7430, 496 aa
1>>>pF1KB7430 496 - 496 aa - 496 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3054+/-0.00088; mu= 8.7421+/- 0.053
mean_var=105.0125+/-20.828, 0's: 0 Z-trim(109.0): 25 B-trim: 0 in 0/51
Lambda= 0.125157
statistics sampled from 10542 (10563) to 10542 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.324), width: 16
Scan time: 3.040
The best scores are: opt bits E(32554)
CCDS5119.2 CEP85L gene_id:387119|Hs108|chr6 ( 496) 3298 606.1 2.8e-173
CCDS43498.1 CEP85L gene_id:387119|Hs108|chr6 ( 805) 3189 586.5 3.7e-167
CCDS55052.1 CEP85L gene_id:387119|Hs108|chr6 ( 808) 3014 554.9 1.2e-157
CCDS60038.1 CEP85 gene_id:64793|Hs108|chr1 ( 711) 312 67.0 7.9e-11
>>CCDS5119.2 CEP85L gene_id:387119|Hs108|chr6 (496 aa)
initn: 3298 init1: 3298 opt: 3298 Z-score: 3224.3 bits: 606.1 E(32554): 2.8e-173
Smith-Waterman score: 3298; 100.0% identity (100.0% similar) in 496 aa overlap (1-496:1-496)
10 20 30 40 50 60
pF1KB7 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV
430 440 450 460 470 480
490
pF1KB7 GFSNKVELGQQHFLSI
::::::::::::::::
CCDS51 GFSNKVELGQQHFLSI
490
>>CCDS43498.1 CEP85L gene_id:387119|Hs108|chr6 (805 aa)
initn: 3218 init1: 3189 opt: 3189 Z-score: 3114.5 bits: 586.5 E(32554): 3.7e-167
Smith-Waterman score: 3189; 99.8% identity (100.0% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB7 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS43 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKL
430 440 450 460 470 480
490
pF1KB7 GFSNKVELGQQHFLSI
CCDS43 KTRDRYISSLKKKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILEEKNKN
490 500 510 520 530 540
>>CCDS55052.1 CEP85L gene_id:387119|Hs108|chr6 (808 aa)
initn: 3043 init1: 3014 opt: 3014 Z-score: 2943.7 bits: 554.9 E(32554): 1.2e-157
Smith-Waterman score: 3014; 99.8% identity (100.0% similar) in 456 aa overlap (25-480:28-483)
10 20 30 40 50
pF1KB7 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRH
:::::::::::::::::::::::::::::::::
CCDS55 MIWRNNWKSTTGRLNVKLQSDKLQHGCGPDYSSAWLPANESLWQATTVPSNHRNNHIRRH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 SIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRES
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 LTPDGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LTPDGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCRE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 ESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 EDFRASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EDFRASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 MWLTEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MWLTEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 SKWESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SKWESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVAS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB7 LQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLE
430 440 450 460 470 480
480 490
pF1KB7 EKVGFSNKVELGQQHFLSI
::.
CCDS55 EKLKTRDRYISSLKKKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILEEK
490 500 510 520 530 540
>>CCDS60038.1 CEP85 gene_id:64793|Hs108|chr1 (711 aa)
initn: 316 init1: 154 opt: 312 Z-score: 307.9 bits: 67.0 E(32554): 7.9e-11
Smith-Waterman score: 383; 29.1% identity (56.9% similar) in 422 aa overlap (81-485:22-402)
60 70 80 90 100 110
pF1KB7 NNHIRRHSIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSAS
.:::. :.: .: .:.::::::::. ..:
CCDS60 MAMQEKYPTEGISHVTSPNFCSSSGSPPFQPIKSHVTIPTAHVMPSTLGTS
10 20 30 40 50
120 130 140 150 160
pF1KB7 ISKLRES-LTPDGSKWSTS-LMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNC
.: . . :..:: : : ...: : :. ... .::. :
CCDS60 PAKPNSTPVGPSSSKLPLSGLAESVGMTRNG---------DLGAMKHSPGLSR----DLM
60 70 80 90
170 180 190 200 210 220
pF1KB7 GQGGTVCREESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDC
.:.. ..::.:. : . ..: :. .: : : . :::.
CCDS60 YFSGAT----GENGIEQ--------SWFPAVG----HERQEEARKFD---IPSMESTLNQ
100 110 120 130
230 240 250 260 270 280
pF1KB7 KYKFESC-SKEDFRASSSTLRRQPVDMTYSALPESKPIMTSSEAFE--PPK-----YLML
. .:. : :. . : . : .:::.: :. .:: :. : :
CCDS60 SAMMETLYSDPHHRVRFHNPRTSTSKELYRVLPEAKKAPGSGAVFERNGPHSNSSGVLPL
140 150 160 170 180 190
290 300 310 320 330 340
pF1KB7 GQQAVGGVPIQPSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQ
: : . :. .: . .:.: . .: . :.: :. .::.: .: : ::
CCDS60 GLQPAPGLS-KP-LPSQVW-----QPSPDTWHPREQSCELST-CRQQLELIRLQMEQ-MQ
200 210 220 230 240 250
350 360 370 380 390
pF1KB7 VLTGS---SRQSYSPGYQ--DFSKWESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDN
. .:. ...:. . ..: :.:. .: ::..::..::.:...:..:....:..
CCDS60 LQNGAICHHPAAFGPSLPILEPAQWISILNSNEHLLKEKELLIDKQRKHISQLEQKVRES
260 270 280 290 300 310
400 410 420 430 440 450
pF1KB7 ELRAQHAMLGHYVNCEDSYVASLQP-QYENTSLQTPFSEESVSHSQQG-EFEQKLASTEK
::... :.::. . : . :: : ::: :.. :.... . :.. ..:.::...:
CCDS60 ELQVHSALLGRPAPFGDVCLLRLQELQRENTFLRAQFAQKTEALSREKIDLEKKLSASEV
320 330 340 350 360 370
460 470 480 490
pF1KB7 EVLQLNEFLKQRLSLFSEEKKKLEEKVGFSNKVELGQQHFLSI
:: . : :: :. ::: :: ::.: .:
CCDS60 EVQLIRESLKVALQKHSEEVKKQEERVKGRDKHINNLKKKCQKESEQNREKQQRIETLER
380 390 400 410 420 430
CCDS60 YLADLPTLEDHQKQSQQLKDSELKSTELQEKVTELESLLEETQAICREKEIQLESLRQRE
440 450 460 470 480 490
496 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:43:33 2016 done: Fri Nov 4 07:43:33 2016
Total Scan time: 3.040 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]