Result of FASTA (omim) for
pF1KB7431
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7431, 308 aa
1>>>pF1KB7431 308 - 308 aa - 308 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0179+/-0.000305; mu= 13.0323+/- 0.019
mean_var=85.7853+/-16.703, 0's: 0 Z-trim(118.0): 30 B-trim: 64 in 1/55
Lambda= 0.138474
statistics sampled from 30402 (30432) to 30402 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.357), width: 16
Scan time: 7.980
The best scores are: opt bits E(85289)
NP_003299 (OMIM: 480100) testis-specific Y-encoded ( 308) 2009 410.7 1.9e-114
NP_001184171 (OMIM: 480100) testis-specific Y-enco ( 294) 1770 363.0 4.2e-100
XP_016885553 (OMIM: 480100) PREDICTED: testis-spec ( 288) 1420 293.0 4.7e-79
NP_001307893 (OMIM: 480100) testis-specific Y-enco ( 221) 1292 267.4 1.9e-71
NP_003300 (OMIM: 604714,608800) testis-specific Y- ( 437) 666 142.5 1.5e-33
NP_071400 (OMIM: 300564) testis-specific Y-encoded ( 693) 580 125.4 3.2e-28
XP_006724655 (OMIM: 300564) PREDICTED: testis-spec ( 694) 580 125.4 3.2e-28
NP_277047 (OMIM: 614721) testis-specific Y-encoded ( 417) 552 119.7 1e-26
NP_001234930 (OMIM: 600960) protein SET isoform 4 ( 266) 346 78.4 1.7e-14
NP_001116293 (OMIM: 600960) protein SET isoform 1 ( 290) 341 77.5 3.6e-14
XP_016870503 (OMIM: 600960) PREDICTED: protein SET ( 309) 341 77.5 3.8e-14
XP_016870504 (OMIM: 600960) PREDICTED: protein SET ( 309) 341 77.5 3.8e-14
XP_016870502 (OMIM: 600960) PREDICTED: protein SET ( 309) 341 77.5 3.8e-14
NP_001234929 (OMIM: 600960) protein SET isoform 3 ( 268) 323 73.9 4.1e-13
NP_003002 (OMIM: 600960) protein SET isoform 2 [Ho ( 277) 323 73.9 4.2e-13
XP_016870505 (OMIM: 600960) PREDICTED: protein SET ( 296) 323 73.9 4.5e-13
XP_016885216 (OMIM: 300564) PREDICTED: testis-spec ( 737) 293 68.1 6.1e-11
XP_016885215 (OMIM: 300564) PREDICTED: testis-spec ( 738) 293 68.1 6.1e-11
NP_004529 (OMIM: 300117) nucleosome assembly prote ( 506) 160 41.4 0.0044
>>NP_003299 (OMIM: 480100) testis-specific Y-encoded pro (308 aa)
initn: 2009 init1: 2009 opt: 2009 Z-score: 2175.8 bits: 410.7 E(85289): 1.9e-114
Smith-Waterman score: 2009; 98.7% identity (98.7% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KB7 MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_003 MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_003 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
::::::::: :::: :::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTET
250 260 270 280 290 300
pF1KB7 SGDSQLLS
::::::::
NP_003 SGDSQLLS
>>NP_001184171 (OMIM: 480100) testis-specific Y-encoded (294 aa)
initn: 1770 init1: 1770 opt: 1770 Z-score: 1918.1 bits: 363.0 E(85289): 4.2e-100
Smith-Waterman score: 1770; 98.5% identity (98.5% similar) in 274 aa overlap (1-274:1-274)
10 20 30 40 50 60
pF1KB7 MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
::::::::: :::: :::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTET
::::::::::::::::::::::::::::::::::
NP_001 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
250 260 270 280 290
pF1KB7 SGDSQLLS
>>XP_016885553 (OMIM: 480100) PREDICTED: testis-specific (288 aa)
initn: 1418 init1: 1418 opt: 1420 Z-score: 1540.3 bits: 293.0 E(85289): 4.7e-79
Smith-Waterman score: 1420; 92.2% identity (93.4% similar) in 243 aa overlap (1-239:1-243)
10 20 30 40 50 60
pF1KB7 MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_016 MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_016 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
130 140 150 160 170 180
190 200 210 220 230
pF1KB7 LSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNIT----EYRASHSTPIE
::::::::: :::: :::::::::::::::::::::::::::::: . : ..
XP_016 LSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITGLLIPLQLSGIRIMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 WYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEE
: :
XP_016 WRPIAADTTTAALTSSTGSLTTTSQDLTRLLRSYVRTCGAIPCNTTRG
250 260 270 280
>>NP_001307893 (OMIM: 480100) testis-specific Y-encoded (221 aa)
initn: 1292 init1: 1292 opt: 1292 Z-score: 1403.8 bits: 267.4 E(85289): 1.9e-71
Smith-Waterman score: 1296; 70.8% identity (70.8% similar) in 308 aa overlap (1-308:1-221)
10 20 30 40 50 60
pF1KB7 MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALG
:::::::::::::::::: :::::::::::
NP_001 MRPEGSLTYRVPERLRQGFCGVGRAAQALV------------------------------
10 20 30
70 80 90 100 110 120
pF1KB7 EEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELE
:::
NP_001 ---------------------------------------------------------ELE
130 140 150 160 170 180
pF1KB7 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDM
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 LSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
::::::::: :::: :::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPD
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTET
160 170 180 190 200 210
pF1KB7 SGDSQLLS
::::::::
NP_001 SGDSQLLS
220
>>NP_003300 (OMIM: 604714,608800) testis-specific Y-enco (437 aa)
initn: 626 init1: 626 opt: 666 Z-score: 723.5 bits: 142.5 E(85289): 1.5e-33
Smith-Waterman score: 666; 41.1% identity (68.4% similar) in 275 aa overlap (20-288:135-408)
10 20 30 40
pF1KB7 MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRM-EAVQEG
::. :.:. :. .. :. . . . .
NP_003 AEGLAAASVVMAADRSLKKGVQGGEKALEICGAQRSASELTAGAEAEAEEVKTGKCATVS
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB7 AAGVESEQAALGEEAVLLLDDIMAEVEVVAEE--EGL-VERREEAQRAQQAVP--GPGPM
:: .: :.: . .:. : ..: : : :. :: .: :: . ..: :: :.
NP_003 AAVAERESAEVVKEG-LAEKEVMEEQMEVEEQPPEGEEIEVAEEDRLEEEAREEEGPWPL
170 180 190 200 210 220
110 120 130 140 150 160
pF1KB7 TPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVI
.. : :.:.::. ::::: .::.. ..:. : :. .:.::. .::..:::: ...
NP_003 HEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAF
230 240 250 260 270 280
170 180 190 200 210 220
pF1KB7 ANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVN
::::.::.: .: .:: :...:::.: .: ::. .::: ::::.::.:.::: :
NP_003 RNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVR
290 300 310 320 330 340
230 240 250 260 270 280
pF1KB7 ITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRN
. .: :::: : .: ... ::... .::.:::::.. :.:::::. .::: :
NP_003 SSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTWFSDHSLPESDKIAEIIKEDLWPN
350 360 370 380 390 400
290 300
pF1KB7 PLQYYKRMKPPEEGTETSGDSQLLS
:::::
NP_003 PLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG
410 420 430
>>NP_071400 (OMIM: 300564) testis-specific Y-encoded-lik (693 aa)
initn: 599 init1: 572 opt: 580 Z-score: 627.7 bits: 125.4 E(85289): 3.2e-28
Smith-Waterman score: 580; 39.3% identity (69.5% similar) in 239 aa overlap (61-292:166-399)
40 50 60 70 80
pF1KB7 CASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLV---ERR
:::.....: : :.:.. .::
NP_071 QSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVED-----EDEDERESMRSSRRRR
140 150 160 170 180 190
90 100 110 120 130 140
pF1KB7 EEAQRAQQAVPGPG----PMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKP
.. .: :. : . :: :. : .:..:: :: .: ::: : ..:. . :.:
NP_071 RRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRP
200 210 220 230 240 250
150 160 170 180 190 200
pF1KB7 HLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIML
:.:: .:: .::::.... :::..: ::. .:::.. :...:.:.. .: :. :
NP_071 FLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKL
260 270 280 290 300 310
210 220 230 240 250 260
pF1KB7 FFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSD
.:..:::: : ::.::. : . .::::::.:. : .: :. ....: .::.:::.
NP_071 YFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSN
320 330 340 350 360 370
270 280 290 300
pF1KB7 HNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
:.. ...::::. .::: :::.:: : .
NP_071 HSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDY
380 390 400 410 420 430
>>XP_006724655 (OMIM: 300564) PREDICTED: testis-specific (694 aa)
initn: 622 init1: 572 opt: 580 Z-score: 627.7 bits: 125.4 E(85289): 3.2e-28
Smith-Waterman score: 580; 39.3% identity (69.5% similar) in 239 aa overlap (61-292:166-399)
40 50 60 70 80
pF1KB7 CASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLV---ERR
:::.....: : :.:.. .::
XP_006 QSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVED-----EDEDERESMRSSRRRR
140 150 160 170 180 190
90 100 110 120 130 140
pF1KB7 EEAQRAQQAVPGPG----PMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKP
.. .: :. : . :: :. : .:..:: :: .: ::: : ..:. . :.:
XP_006 RRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRP
200 210 220 230 240 250
150 160 170 180 190 200
pF1KB7 HLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIML
:.:: .:: .::::.... :::..: ::. .:::.. :...:.:.. .: :. :
XP_006 FLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKL
260 270 280 290 300 310
210 220 230 240 250 260
pF1KB7 FFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSD
.:..:::: : ::.::. : . .::::::.:. : .: :. ....: .::.:::.
XP_006 YFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSN
320 330 340 350 360 370
270 280 290 300
pF1KB7 HNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
:.. ...::::. .::: :::.:: : .
XP_006 HSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDY
380 390 400 410 420 430
>>NP_277047 (OMIM: 614721) testis-specific Y-encoded-lik (417 aa)
initn: 570 init1: 537 opt: 552 Z-score: 600.7 bits: 119.7 E(85289): 1e-26
Smith-Waterman score: 552; 39.2% identity (70.0% similar) in 227 aa overlap (78-302:173-397)
50 60 70 80 90 100
pF1KB7 GAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPES
: :. : :: .. ..: : :: . :.
NP_277 GPAGKKAPETCSTAGRGPQVIAGGRQKKGAAGENTSVSAGEEKKEERDA--GSGPPATEG
150 160 170 180 190 200
110 120 130 140 150 160
pF1KB7 ALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHP
... : ::..:: .:::: .:. : .:. . : ::.::. .::..::::.... :::
NP_277 SMDTLENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHP
210 220 230 240 250 260
170 180 190 200 210 220
pF1KB7 QMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEY
:............:::. :::::: :: ..: ::::::::. ::: . .
NP_277 QLASFLNSQEKEVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQ
270 280 290 300 310 320
230 240 250 260 270 280
pF1KB7 RASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQY
.:.::::.: : ..... . . ... .::.:::.:. :.::.::. ..:: ::::.
NP_277 VVSRSTPIQWLPGHDLQSLSQGNPENNRSFFGWFSNHSSIESDKIVEIINEELWPNPLQF
330 340 350 360 370 380
290 300
pF1KB7 YKRMKPP--EEGTETSGDSQLLS
: . :.: : :
NP_277 YLLSEGARVEKGKEKEGRQGPGKQPMETTQPGVSQSN
390 400 410
>>NP_001234930 (OMIM: 600960) protein SET isoform 4 [Hom (266 aa)
initn: 448 init1: 312 opt: 346 Z-score: 381.3 bits: 78.4 E(85289): 1.7e-14
Smith-Waterman score: 500; 35.0% identity (66.8% similar) in 226 aa overlap (92-305:4-229)
70 80 90 100 110 120
pF1KB7 EAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEP
:..: : : . :.:.. :: :..
NP_001 MMPRSHQPPPPPHEKEQQEAIEHIDEVQNEIDR
10 20 30
130 140 150 160 170 180
pF1KB7 VNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDML
.: :: . . . ..:... :.: ...:. .: ..:.::.....::::.:::. .:::. :
NP_001 LNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEAL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 SYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDY
:.. .:: : . .: ..: ::::.:::..::. .: . .:.:: :.:
NP_001 HYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGK
100 110 120 130 140 150
250 260 270 280 290
pF1KB7 EV---------EAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYY--KR
.. .: :.:.:. .::.::.::. ::.....:.. :.: ::::::
NP_001 DLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPD
160 170 180 190 200 210
300
pF1KB7 MKPPE-EGTETSGDSQLLS
: : :: : . :..
NP_001 MDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
220 230 240 250 260
>>NP_001116293 (OMIM: 600960) protein SET isoform 1 [Hom (290 aa)
initn: 448 init1: 312 opt: 341 Z-score: 375.3 bits: 77.5 E(85289): 3.6e-14
Smith-Waterman score: 495; 34.5% identity (66.4% similar) in 229 aa overlap (89-305:25-253)
60 70 80 90 100 110
pF1KB7 LGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVE
: :. ..: : . :.:.. :: :
NP_001 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNE
10 20 30 40 50
120 130 140 150 160 170
pF1KB7 LEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDE
.. .: :: . . . ..:... :.: ...:. .: ..:.::.....::::.:::. .:::
NP_001 IDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDE
60 70 80 90 100 110
180 190 200 210 220 230
pF1KB7 DMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWY
. : :.. .:: : . .: ..: ::::.:::..::. .: . .:.:: :.:
NP_001 EALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWK
120 130 140 150 160 170
240 250 260 270 280
pF1KB7 PDYEV---------EAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYY-
.. .: :.:.:. .::.::.::. ::.....:.. :.: ::::::
NP_001 SGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL
180 190 200 210 220 230
290 300
pF1KB7 -KRMKPPE-EGTETSGDSQLLS
: : :: : . :..
NP_001 VPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
240 250 260 270 280 290
308 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:44:05 2016 done: Fri Nov 4 07:44:06 2016
Total Scan time: 7.980 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]