Result of FASTA (omim) for pF1KB7437
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7437, 238 aa
  1>>>pF1KB7437 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4950+/-0.000505; mu= 18.6443+/- 0.031
 mean_var=68.2688+/-14.658, 0's: 0 Z-trim(107.4): 60  B-trim: 0 in 0/48
 Lambda= 0.155226
 statistics sampled from 15460 (15504) to 15460 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.522), E-opt: 0.2 (0.182), width:  16
 Scan time:  5.700

The best scores are:                                      opt bits E(85289)
NP_057140 (OMIM: 616874) protein lifeguard 4 isofo ( 238) 1497 344.6 8.6e-95
NP_001269535 (OMIM: 616874) protein lifeguard 4 is ( 285) 1275 295.0 9.1e-80
NP_001269539 (OMIM: 616874) protein lifeguard 4 is ( 207) 1205 279.2 3.8e-75
NP_001269538 (OMIM: 616874) protein lifeguard 4 is ( 162)  970 226.5 2.2e-59
NP_000828 (OMIM: 138251) protein lifeguard 1 [Homo ( 371)  398 98.7 1.4e-20
NP_001009184 (OMIM: 138251) protein lifeguard 1 [H ( 371)  398 98.7 1.4e-20
XP_016874529 (OMIM: 604306) PREDICTED: protein lif ( 316)  375 93.5 4.6e-19
NP_036438 (OMIM: 604306) protein lifeguard 2 [Homo ( 316)  375 93.5 4.6e-19
XP_005268787 (OMIM: 604306) PREDICTED: protein lif ( 274)  373 93.0 5.7e-19
NP_001308357 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308361 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308364 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308358 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308365 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_071435 (OMIM: 610364) protein lifeguard 3 isofo ( 311)  284 73.1 6.2e-13
NP_001308359 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308356 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
NP_001308362 (OMIM: 610364) protein lifeguard 3 is ( 311)  284 73.1 6.2e-13
XP_011509929 (OMIM: 610364) PREDICTED: protein lif ( 311)  284 73.1 6.2e-13
NP_001308367 (OMIM: 610364) protein lifeguard 3 is ( 200)  269 69.6 4.7e-12
NP_003208 (OMIM: 600748) bax inhibitor 1 isoform 1 ( 237)  226 60.0 4.2e-09
NP_001092046 (OMIM: 600748) bax inhibitor 1 isofor ( 295)  226 60.1 4.8e-09
XP_005269183 (OMIM: 600748) PREDICTED: bax inhibit ( 295)  226 60.1 4.8e-09


>>NP_057140 (OMIM: 616874) protein lifeguard 4 isoform b  (238 aa)
 initn: 1497 init1: 1497 opt: 1497  Z-score: 1822.8  bits: 344.6 E(85289): 8.6e-95
Smith-Waterman score: 1497; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)

               10        20        30        40        50        60
pF1KB7 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SVRTFVHESPALILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SVRTFVHESPALILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMEL
              130       140       150       160       170       180

              190       200       210       220       230        
pF1KB7 VLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
              190       200       210       220       230        

>>NP_001269535 (OMIM: 616874) protein lifeguard 4 isofor  (285 aa)
 initn: 1275 init1: 1275 opt: 1275  Z-score: 1553.1  bits: 295.0 E(85289): 9.1e-80
Smith-Waterman score: 1279; 82.2% identity (82.6% similar) in 270 aa overlap (16-238:16-285)

               10        20        30                              
pF1KB7 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMA---------------------------
                      :::::::::::::::::.                           
NP_001 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMVLQRDCTFSKQYMRIPSAPSATLNIIRF
               10        20        30        40        50        60

                                40        50        60        70   
pF1KB7 --------------------FLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALI
                           ::::::::::::::::::::::::::::::::::::::::
NP_001 FHLRQSGRSGMVNIFYKGPTFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALI
               70        80        90       100       110       120

            80        90       100       110       120       130   
pF1KB7 LLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTT
              130       140       150       160       170       180

           140       150       160       170       180       190   
pF1KB7 VFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLAAAGALLFCGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLAAAGALLFCGF
              190       200       210       220       230       240

           200       210       220       230        
pF1KB7 IIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
       :::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
              250       260       270       280     

>>NP_001269539 (OMIM: 616874) protein lifeguard 4 isofor  (207 aa)
 initn: 1205 init1: 1205 opt: 1205  Z-score: 1470.1  bits: 279.2 E(85289): 3.8e-75
Smith-Waterman score: 1205; 99.0% identity (99.0% similar) in 196 aa overlap (43-238:12-207)

             20        30        40        50        60        70  
pF1KB7 IEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPAL
                                     :  :::::::::::::::::::::::::::
NP_001                    MAAAWPPPPCTSEWVLLTTVTSTVFLYFESVRTFVHESPAL
                                  10        20        30        40 

             80        90       100       110       120       130  
pF1KB7 ILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTT
              50        60        70        80        90       100 

            140       150       160       170       180       190  
pF1KB7 TVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLAAAGALLFCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLAAAGALLFCG
             110       120       130       140       150       160 

            200       210       220       230        
pF1KB7 FIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
       ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
             170       180       190       200       

>>NP_001269538 (OMIM: 616874) protein lifeguard 4 isofor  (162 aa)
 initn: 994 init1: 970 opt: 970  Z-score: 1187.0  bits: 226.5 E(85289): 2.2e-59
Smith-Waterman score: 970; 95.7% identity (99.4% similar) in 162 aa overlap (1-162:1-162)

               10        20        30        40        50        60
pF1KB7 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SVRTFVHESPALILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVRTFVHESPALILLFALGSLGLIFALILNRHKYPLNLYLLFGFTLLEALTVAVVVTFYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMEL
       :::::::::::::::::::::::::::::::::::.. ....                  
NP_001 VYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGILEVFFL                  
              130       140       150       160                    

              190       200       210       220       230        
pF1KB7 VLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK

>>NP_000828 (OMIM: 138251) protein lifeguard 1 [Homo sap  (371 aa)
 initn: 418 init1: 211 opt: 398  Z-score: 490.2  bits: 98.7 E(85289): 1.4e-20
Smith-Waterman score: 398; 35.2% identity (69.5% similar) in 210 aa overlap (30-232:157-366)

                10        20        30        40        50         
pF1KB7  MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYF
                                     ::.::.:::. .:.::. .:  : .:: . 
NP_000 SPQHGNYQEEGPPSYYDNQDFPATNWDDKSIRQAFIRKVFLVLTLQLSVTLSTVSVFTFV
        130       140       150       160       170       180      

      60        70         80        90         100       110      
pF1KB7 ESVRTFVHESP-ALILLFALGSLGLIFALILN--RHKYPLNLYLLFGFTLLEALTVAVVV
         :. ::.:.  .  . .:.  ..::     .  :.:.: ::  :  .:   .  :....
NP_000 AEVKGFVRENVWTYYVSYAVFFISLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMIA
        190       200       210       220       230       240      

        120       130       140       150       160       170      
pF1KB7 TFYDVYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSE
       .::..  ...:  .::.: : ......:.. ::..  . :.. . .: . ..: .:. ..
NP_000 SFYNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNR
        250       260       270       280       290       300      

        180       190       200           210       220       230  
pF1KB7 IMELVLAAAGALLFCGFIIYDTHSLMHK----LSPEEYVLAAISLYLDIINLFLHLLRFL
       :.:.: :. :::::  :.  ::. :. .    :::::::.::..:: ::::.::..: ..
NP_000 ILEIVYASLGALLFTCFLAVDTQLLLGNKQLSLSPEEYVFAALNLYTDIINIFLYILTII
        310       320       330       340       350       360      

             
pF1KB7 EAVNKK
             
NP_000 GRAKE 
        370  

>>NP_001009184 (OMIM: 138251) protein lifeguard 1 [Homo   (371 aa)
 initn: 418 init1: 211 opt: 398  Z-score: 490.2  bits: 98.7 E(85289): 1.4e-20
Smith-Waterman score: 398; 35.2% identity (69.5% similar) in 210 aa overlap (30-232:157-366)

                10        20        30        40        50         
pF1KB7  MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYF
                                     ::.::.:::. .:.::. .:  : .:: . 
NP_001 SPQHGNYQEEGPPSYYDNQDFPATNWDDKSIRQAFIRKVFLVLTLQLSVTLSTVSVFTFV
        130       140       150       160       170       180      

      60        70         80        90         100       110      
pF1KB7 ESVRTFVHESP-ALILLFALGSLGLIFALILN--RHKYPLNLYLLFGFTLLEALTVAVVV
         :. ::.:.  .  . .:.  ..::     .  :.:.: ::  :  .:   .  :....
NP_001 AEVKGFVRENVWTYYVSYAVFFISLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMIA
        190       200       210       220       230       240      

        120       130       140       150       160       170      
pF1KB7 TFYDVYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSE
       .::..  ...:  .::.: : ......:.. ::..  . :.. . .: . ..: .:. ..
NP_001 SFYNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNR
        250       260       270       280       290       300      

        180       190       200           210       220       230  
pF1KB7 IMELVLAAAGALLFCGFIIYDTHSLMHK----LSPEEYVLAAISLYLDIINLFLHLLRFL
       :.:.: :. :::::  :.  ::. :. .    :::::::.::..:: ::::.::..: ..
NP_001 ILEIVYASLGALLFTCFLAVDTQLLLGNKQLSLSPEEYVFAALNLYTDIINIFLYILTII
        310       320       330       340       350       360      

             
pF1KB7 EAVNKK
             
NP_001 GRAKE 
        370  

>>XP_016874529 (OMIM: 604306) PREDICTED: protein lifegua  (316 aa)
 initn: 342 init1: 135 opt: 375  Z-score: 463.3  bits: 93.5 E(85289): 4.6e-19
Smith-Waterman score: 375; 33.1% identity (62.9% similar) in 248 aa overlap (5-232:69-311)

                                         10        20              
pF1KB7                           MADPDPRYPRSSIEDDFNYGSSVASATV-----H
                                     ::    :: .. :  :.    .:      .
XP_016 EEATSGEGMKAGAFPPAPTAVPLHPSWAYVDPS-SSSSYDNGFPTGDHELFTTFSWDDQK
       40        50        60        70         80        90       

      30        40        50        60        70        80         
pF1KB7 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALIL
       .: .:.::::.:: .:.:.: .. ..: . . :. .:. .:.    .  .: ...::  :
XP_016 VRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPG----WYWASYAVFFATYL
       100       110       120       130           140       150   

      90              100       110       120       130       140  
pF1KB7 N-------RHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYT
       .       :...: :: ::  :::  :  .... ..:..  .:  . .:. : ...::..
XP_016 TLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVTVFS
           160       170       180       190       200       210   

            150       160           170       180       190        
pF1KB7 LQSKKDFSKFGAGLFALLWILCLSGF----LKFFFYSEIMELVLAAAGALLFCGFIIYDT
       .:.: ::..  . ::.::  : .::.    :  : :   .. : :: :: .:  :.  ::
XP_016 FQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDT
           220       230       240       250       260       270   

      200           210       220       230        
pF1KB7 HSLM----HKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
       . ::    :.::::::...:...::::: .:  .:...      
XP_016 QLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNRE 
           280       290       300       310       

>>NP_036438 (OMIM: 604306) protein lifeguard 2 [Homo sap  (316 aa)
 initn: 342 init1: 135 opt: 375  Z-score: 463.3  bits: 93.5 E(85289): 4.6e-19
Smith-Waterman score: 375; 33.1% identity (62.9% similar) in 248 aa overlap (5-232:69-311)

                                         10        20              
pF1KB7                           MADPDPRYPRSSIEDDFNYGSSVASATV-----H
                                     ::    :: .. :  :.    .:      .
NP_036 EEATSGEGMKAGAFPPAPTAVPLHPSWAYVDPS-SSSSYDNGFPTGDHELFTTFSWDDQK
       40        50        60        70         80        90       

      30        40        50        60        70        80         
pF1KB7 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALIL
       .: .:.::::.:: .:.:.: .. ..: . . :. .:. .:.    .  .: ...::  :
NP_036 VRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPG----WYWASYAVFFATYL
       100       110       120       130           140       150   

      90              100       110       120       130       140  
pF1KB7 N-------RHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYT
       .       :...: :: ::  :::  :  .... ..:..  .:  . .:. : ...::..
NP_036 TLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVTVFS
           160       170       180       190       200       210   

            150       160           170       180       190        
pF1KB7 LQSKKDFSKFGAGLFALLWILCLSGF----LKFFFYSEIMELVLAAAGALLFCGFIIYDT
       .:.: ::..  . ::.::  : .::.    :  : :   .. : :: :: .:  :.  ::
NP_036 FQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDT
           220       230       240       250       260       270   

      200           210       220       230        
pF1KB7 HSLM----HKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVNKK
       . ::    :.::::::...:...::::: .:  .:...      
NP_036 QLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNRE 
           280       290       300       310       

>>XP_005268787 (OMIM: 604306) PREDICTED: protein lifegua  (274 aa)
 initn: 342 init1: 135 opt: 373  Z-score: 461.6  bits: 93.0 E(85289): 5.7e-19
Smith-Waterman score: 373; 34.4% identity (66.1% similar) in 218 aa overlap (30-232:56-269)

                10        20        30        40        50         
pF1KB7  MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYF
                                     .: .:.::::.:: .:.:.: .. ..: . 
XP_005 VNEGSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFC
          30        40        50        60        70        80     

      60        70        80        90              100       110  
pF1KB7 ESVRTFVHESPALILLFALGSLGLIFALILN-------RHKYPLNLYLLFGFTLLEALTV
       . :. .:. .:.    .  .: ...::  :.       :...: :: ::  :::  :  .
XP_005 DPVKDYVQANPG----WYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLT
          90           100       110       120       130       140 

            120       130       140       150       160            
pF1KB7 AVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGF----
       ... ..:..  .:  . .:. : ...::...:.: ::..  . ::.::  : .::.    
XP_005 GMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAI
             150       160       170       180       190       200 

      170       180       190       200           210       220    
pF1KB7 LKFFFYSEIMELVLAAAGALLFCGFIIYDTHSLM----HKLSPEEYVLAAISLYLDIINL
       :  : :   .. : :: :: .:  :.  ::. ::    :.::::::...:...::::: .
XP_005 LLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYI
             210       220       230       240       250       260 

          230        
pF1KB7 FLHLLRFLEAVNKK
       :  .:...      
XP_005 FTFFLQLFGTNRE 
             270     

>>NP_001308357 (OMIM: 610364) protein lifeguard 3 isofor  (311 aa)
 initn: 233 init1: 120 opt: 284  Z-score: 353.2  bits: 73.1 E(85289): 6.2e-13
Smith-Waterman score: 362; 31.3% identity (68.7% similar) in 217 aa overlap (30-232:94-307)

                10        20        30        40        50         
pF1KB7  MADPDPRYPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYF
                                     .: .:.::::::.:.:.:.:..  ..: . 
NP_001 PMNYGPGHGYDGEERAVSDSFGPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIFTFV
            70        80        90       100       110       120   

      60        70        80        90            100       110    
pF1KB7 ESVRTFVHESPALILLFALGSLGLIFALILN-----RHKYPLNLYLLFGFTLLEALTVAV
       : : .::... :.   ..  .. ..  :::      :...: :. ::  ::.  .. ...
NP_001 EPVSAFVRRNVAVY--YVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGT
           130         140       150       160       170       180 

          120       130       140       150       160        170   
pF1KB7 VVTFYDVYIILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCL-SGFLK---
       . ..:..  .. :.:.:..: ...:.. .:.: ::..  .::: .: :. : .:..    
NP_001 ISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSC-TGLFCVLGIVLLVTGIVTSIV
             190       200       210        220       230       240

               180       190       200           210       220     
pF1KB7 -FFFYSEIMELVLAAAGALLFCGFIIYDTHSLM----HKLSPEEYVLAAISLYLDIINLF
        .: :   .... :: ::. :  :. :::. ..    : .:::.:. .:...: ::: .:
NP_001 LYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIF
              250       260       270       280       290       300

         230        
pF1KB7 LHLLRFLEAVNKK
         .:...      
NP_001 TFVLQLMGDRN  
              310   




238 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 07:48:18 2016 done: Fri Nov  4 07:48:19 2016
 Total Scan time:  5.700 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com