FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7503, 76 aa
  1>>>pF1KB7503 76 - 76 aa - 76 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0726+/-0.000706; mu= 10.2163+/- 0.043
 mean_var=74.7321+/-14.621, 0's: 0 Z-trim(110.1): 4  B-trim: 76 in 2/51
 Lambda= 0.148361
 statistics sampled from 11368 (11370) to 11368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.349), width:  16
 Scan time:  1.210

The best scores are:                                      opt bits E(32554)
CCDS45534.1 HSBP1 gene_id:3281|Hs108|chr16         (  76)  473 109.2 2.5e-25


>>CCDS45534.1 HSBP1 gene_id:3281|Hs108|chr16              (76 aa)
 initn: 473 init1: 473 opt: 473  Z-score: 568.1  bits: 109.2 E(32554): 2.5e-25
Smith-Waterman score: 473; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)

               10        20        30        40        50        60
pF1KB7 MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG
               10        20        30        40        50        60

               70      
pF1KB7 VEELESENKIPATQKS
       ::::::::::::::::
CCDS45 VEELESENKIPATQKS
               70      




76 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:13:27 2016 done: Fri Nov  4 08:13:27 2016
 Total Scan time:  1.210 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]