FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7505, 98 aa
  1>>>pF1KB7505 98 - 98 aa - 98 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6747+/-0.000687; mu= 3.4685+/- 0.042
 mean_var=90.4107+/-17.547, 0's: 0 Z-trim(111.9): 5  B-trim: 0 in 0/52
 Lambda= 0.134885
 statistics sampled from 12736 (12738) to 12736 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.734), E-opt: 0.2 (0.391), width:  16
 Scan time:  1.600

The best scores are:                                      opt bits E(32554)
CCDS10217.1 SNAPC5 gene_id:10302|Hs108|chr15       (  98)  598 125.2 6.6e-30


>>CCDS10217.1 SNAPC5 gene_id:10302|Hs108|chr15            (98 aa)
 initn: 598 init1: 598 opt: 598  Z-score: 650.4  bits: 125.2 E(32554): 6.6e-30
Smith-Waterman score: 598; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)

               10        20        30        40        50        60
pF1KB7 MLSRLQELRKEEETLLRLKAALHDQLNRLKVEELALQSMISSRRGDEMLSSHTVPEQSHD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLSRLQELRKEEETLLRLKAALHDQLNRLKVEELALQSMISSRRGDEMLSSHTVPEQSHD
               10        20        30        40        50        60

               70        80        90        
pF1KB7 MLVHVDNEASINQTTLELSTKSHVTEEEEEEEEEESDS
       ::::::::::::::::::::::::::::::::::::::
CCDS10 MLVHVDNEASINQTTLELSTKSHVTEEEEEEEEEESDS
               70        80        90        




98 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:14:07 2016 done: Fri Nov  4 08:14:07 2016
 Total Scan time:  1.600 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]