Result of FASTA (omim) for
pF1KB7511
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7511, 125 aa
1>>>pF1KB7511 125 - 125 aa - 125 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1140+/-0.000234; mu= 9.7097+/- 0.015
mean_var=119.4932+/-23.467, 0's: 0 Z-trim(125.5): 60 B-trim: 0 in 0/60
Lambda= 0.117328
statistics sampled from 49284 (49353) to 49284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.871), E-opt: 0.2 (0.579), width: 16
Scan time: 4.400
The best scores are: opt bits E(85289)
NP_006390 (OMIM: 612476) basic leucine zipper tran ( 125) 825 148.6 2.5e-36
NP_061134 (OMIM: 612470) basic leucine zipper tran ( 127) 327 64.3 6.1e-11
NP_612465 (OMIM: 614983) basic leucine zipper tran ( 274) 244 50.5 1.8e-06
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 211 44.7 5.9e-05
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 211 44.7 5.9e-05
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 211 44.7 5.9e-05
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 211 44.7 5.9e-05
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 211 44.7 5.9e-05
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 211 44.7 5.9e-05
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 211 44.7 5.9e-05
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 211 44.8 6.2e-05
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 211 44.8 6.2e-05
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 208 44.1 6.9e-05
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 208 44.1 6.9e-05
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 211 44.8 7e-05
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 208 44.3 9.1e-05
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 208 44.3 9.1e-05
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 208 44.3 9.1e-05
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 208 44.3 9.1e-05
XP_016857172 (OMIM: 612470) PREDICTED: basic leuci ( 138) 202 43.1 0.00015
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271) 189 41.2 0.0011
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 187 40.8 0.0012
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287) 187 40.9 0.0015
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326) 187 41.0 0.0016
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237) 183 40.2 0.0021
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338) 183 40.3 0.0027
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380) 177 39.3 0.0059
>>NP_006390 (OMIM: 612476) basic leucine zipper transcri (125 aa)
initn: 825 init1: 825 opt: 825 Z-score: 773.1 bits: 148.6 E(85289): 2.5e-36
Smith-Waterman score: 825; 100.0% identity (100.0% similar) in 125 aa overlap (1-125:1-125)
10 20 30 40 50 60
pF1KB7 MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQPHVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQPHVSS
70 80 90 100 110 120
pF1KB7 PRFQP
:::::
NP_006 PRFQP
>>NP_061134 (OMIM: 612470) basic leucine zipper transcri (127 aa)
initn: 333 init1: 295 opt: 327 Z-score: 317.4 bits: 64.3 E(85289): 6.1e-11
Smith-Waterman score: 327; 54.3% identity (77.2% similar) in 92 aa overlap (16-104:25-116)
10 20 30 40 50
pF1KB7 MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKA
: : .:. :: :.:.::::::.:::.::..:::::
NP_061 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
10 20 30 40 50 60
60 70 80 90 100
pF1KB7 DTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAS---TPSPPEVVY
: :: : :.::..:. ::.:: .::::::..: .:. :: .: .: .: ::
NP_061 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
70 80 90 100 110 120
110 120
pF1KB7 SAHAFHQPHVSSPRFQP
NP_061 VAGCLPR
>>NP_612465 (OMIM: 614983) basic leucine zipper transcri (274 aa)
initn: 263 init1: 230 opt: 244 Z-score: 237.2 bits: 50.5 E(85289): 1.8e-06
Smith-Waterman score: 244; 47.0% identity (74.7% similar) in 83 aa overlap (21-103:12-94)
10 20 30 40 50 60
pF1KB7 MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESED
: . . .: ...::: :::.:::..:.:::.:: . :.
NP_612 MHLCGGNGLLTQTDPKEQQRQLKKQKNRAAAQRSRQKHTDKADALHQQHES
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 LEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQPHVSS
:::.: ::::::..: :: ... .:. :: :: . :: .:
NP_612 LEKDNLALRKEIQSLQAELAWWSRTLHVHERLCPMDCASCSAPGLLGCWDQAEGLLGPGP
60 70 80 90 100 110
pF1KB7 PRFQP
NP_612 QGQHGCREQLELFQTPGSCYPAQPLSPGPQPHDSPSLLQCPLPSLSLGPAVVAEPPVQLS
120 130 140 150 160 170
>>XP_016876463 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
XP_016 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
XP_016 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
XP_016 KTPESEGNPLLEQLEKK
150 160
>>XP_016876464 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
XP_016 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
XP_016 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
XP_016 KTPESEGNPLLEQLEKK
150 160
>>NP_001128520 (OMIM: 608657) jun dimerization protein 2 (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
NP_001 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
NP_001 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
NP_001 KTPESEGNPLLEQLEKK
150 160
>>NP_569736 (OMIM: 608657) jun dimerization protein 2 is (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
NP_569 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
NP_569 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
NP_569 KTPESEGNPLLEQLEKK
150 160
>>XP_005267389 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
XP_005 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
XP_005 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
XP_005 KTPESEGNPLLEQLEKK
150 160
>>XP_016876462 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
XP_016 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
XP_016 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
XP_016 KTPESEGNPLLEQLEKK
150 160
>>NP_001128519 (OMIM: 608657) jun dimerization protein 2 (163 aa)
initn: 206 init1: 186 opt: 211 Z-score: 209.9 bits: 44.7 E(85289): 5.9e-05
Smith-Waterman score: 211; 35.5% identity (71.0% similar) in 93 aa overlap (12-103:57-149)
10 20 30 40
pF1KB7 MPHSSDSSDSSFSRSPPPGKQD-SSDDVRRVQRREKNRIAA
... : : :.. . .. :: .:::::..::
NP_001 SSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 QKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAST
. :... .... :. ::: :: .:: :. .:..: .: . . .:: :.: : : . :.
NP_001 ARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSV
90 100 110 120 130 140
110 120
pF1KB7 PSPPEVVYSAHAFHQPHVSSPRFQP
.:
NP_001 KTPESEGNPLLEQLEKK
150 160
125 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:19:00 2016 done: Fri Nov 4 08:19:01 2016
Total Scan time: 4.400 Total Display time: -0.050
Function used was FASTA [36.3.4 Apr, 2011]