Result of FASTA (omim) for
pF1KB7529
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7529, 163 aa
1>>>pF1KB7529 163 - 163 aa - 163 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8481+/-0.000298; mu= 7.7579+/- 0.019
mean_var=164.5950+/-32.498, 0's: 0 Z-trim(122.6): 54 B-trim: 101 in 1/58
Lambda= 0.099969
statistics sampled from 41046 (41110) to 41046 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.817), E-opt: 0.2 (0.482), width: 16
Scan time: 6.380
The best scores are: opt bits E(85289)
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 1048 161.6 5.2e-40
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 1048 161.6 5.2e-40
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 1048 161.6 5.2e-40
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 1048 161.6 5.2e-40
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 1048 161.6 5.2e-40
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 1048 161.6 5.2e-40
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 1048 161.6 5.2e-40
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 1048 161.6 5.4e-40
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 1048 161.6 5.4e-40
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 1048 161.7 6.1e-40
XP_016876465 (OMIM: 608657) PREDICTED: jun dimeriz ( 135) 440 73.8 1.1e-13
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 430 72.5 3.8e-13
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 430 72.5 3.8e-13
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 430 72.5 3.8e-13
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 430 72.5 3.8e-13
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 426 71.7 4.3e-13
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 426 71.7 4.3e-13
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271) 280 51.0 1.6e-06
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 268 49.2 4.4e-06
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287) 261 48.3 1.1e-05
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237) 259 48.0 1.2e-05
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326) 261 48.4 1.2e-05
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338) 259 48.1 1.5e-05
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380) 255 47.6 2.5e-05
NP_006390 (OMIM: 612476) basic leucine zipper tran ( 125) 211 40.7 0.00094
NP_061134 (OMIM: 612470) basic leucine zipper tran ( 127) 197 38.7 0.0039
NP_001193415 (OMIM: 603148) cyclic AMP-dependent t ( 106) 190 37.6 0.0069
NP_001035709 (OMIM: 603148) cyclic AMP-dependent t ( 135) 190 37.8 0.0081
>>XP_005267389 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
XP_005 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>XP_016876464 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
XP_016 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>XP_016876463 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
XP_016 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>NP_001128520 (OMIM: 608657) jun dimerization protein 2 (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
NP_001 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>NP_569736 (OMIM: 608657) jun dimerization protein 2 is (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_569 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
NP_569 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>NP_001128519 (OMIM: 608657) jun dimerization protein 2 (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
NP_001 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>XP_016876462 (OMIM: 608657) PREDICTED: jun dimerizatio (163 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.3 bits: 161.6 E(85289): 5.2e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEE
70 80 90 100 110 120
130 140 150 160
pF1KB7 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
:::::::::::::::::::::::::::::::::::::::::::
XP_016 LKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160
>>NP_001128521 (OMIM: 608657) jun dimerization protein 2 (174 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.0 bits: 161.6 E(85289): 5.4e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:12-174)
10 20 30 40
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAP
::::::::::::.::::::::::::::::::::::::::::::::::::
NP_001 MVAGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 LHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLEL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 MNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160 170
>>XP_016876461 (OMIM: 608657) PREDICTED: jun dimerizatio (174 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 839.0 bits: 161.6 E(85289): 5.4e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:12-174)
10 20 30 40
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAP
::::::::::::.::::::::::::::::::::::::::::::::::::
XP_016 MVAGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 LHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLEL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 MNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK
130 140 150 160 170
>>XP_016876460 (OMIM: 608657) PREDICTED: jun dimerizatio (206 aa)
initn: 1048 init1: 1048 opt: 1048 Z-score: 838.1 bits: 161.7 E(85289): 6.1e-40
Smith-Waterman score: 1048; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:44-206)
10 20 30
pF1KB7 MMPGQIPDPSVTAGSLPGLGPLTGLPSSAL
::::::::::::.:::::::::::::::::
XP_016 YCPMDIRSSLFCQIHLSPWEETGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSAL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB7 TVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCR
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB7 NKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPE
140 150 160 170 180 190
160
pF1KB7 SEGNPLLEQLEKK
:::::::::::::
XP_016 SEGNPLLEQLEKK
200
163 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:28:58 2016 done: Fri Nov 4 08:28:59 2016
Total Scan time: 6.380 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]