Result of FASTA (ccds) for pF1KB7539 
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7539, 177 aa
  1>>>pF1KB7539 177 - 177 aa - 177 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6894+/-0.000966; mu= 9.1550+/- 0.058
 mean_var=207.8953+/-45.170, 0's: 0 Z-trim(112.3): 24  B-trim: 565 in 1/51
 Lambda= 0.088951
 statistics sampled from 13028 (13046) to 13028 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.734), E-opt: 0.2 (0.401), width:  16
 Scan time:  1.700

The best scores are:                                      opt bits E(32554)
CCDS3056.1 CNBP gene_id:7555|Hs108|chr3            ( 177) 1347 184.3 3.3e-47
CCDS46907.1 CNBP gene_id:7555|Hs108|chr3           ( 178) 1335 182.8 9.7e-47
CCDS46906.1 CNBP gene_id:7555|Hs108|chr3           ( 179) 1333 182.5 1.2e-46
CCDS54637.1 CNBP gene_id:7555|Hs108|chr3           ( 170) 1274 174.9 2.1e-44
CCDS46908.1 CNBP gene_id:7555|Hs108|chr3           ( 172) 1260 173.1 7.5e-44
CCDS14425.1 ZCCHC13 gene_id:389874|Hs108|chrX      ( 166)  744 106.9 6.3e-24


>>CCDS3056.1 CNBP gene_id:7555|Hs108|chr3                 (177 aa)
 initn: 1347 init1: 1347 opt: 1347  Z-score: 961.0  bits: 184.3 E(32554): 3.3e-47
Smith-Waterman score: 1347; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
               70        80        90       100       110       120

              130       140       150       160       170       
pF1KB7 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
              130       140       150       160       170       

>>CCDS46907.1 CNBP gene_id:7555|Hs108|chr3                (178 aa)
 initn: 987 init1: 812 opt: 1335  Z-score: 952.6  bits: 182.8 E(32554): 9.7e-47
Smith-Waterman score: 1335; 99.4% identity (99.4% similar) in 178 aa overlap (1-177:1-178)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
               10        20        30        40        50        60

               70         80        90       100       110         
pF1KB7 GHLAKDCDLQED-ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC
       :::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC
               70        80        90       100       110       120

     120       130       140       150       160       170       
pF1KB7 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
              130       140       150       160       170        

>>CCDS46906.1 CNBP gene_id:7555|Hs108|chr3                (179 aa)
 initn: 808 init1: 808 opt: 1333  Z-score: 951.2  bits: 182.5 E(32554): 1.2e-46
Smith-Waterman score: 1333; 98.9% identity (98.9% similar) in 179 aa overlap (1-177:1-179)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
               10        20        30        40        50        60

               70          80        90       100       110        
pF1KB7 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
       ::::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
               70        80        90       100       110       120

      120       130       140       150       160       170       
pF1KB7 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
              130       140       150       160       170         

>>CCDS54637.1 CNBP gene_id:7555|Hs108|chr3                (170 aa)
 initn: 1065 init1: 1065 opt: 1274  Z-score: 910.5  bits: 174.9 E(32554): 2.1e-44
Smith-Waterman score: 1274; 96.0% identity (96.0% similar) in 177 aa overlap (1-177:1-170)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       :::::::::::::::::::::::::::::::::::       ::::::::::::::::::
CCDS54 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES
               10        20        30               40        50   

               70        80        90       100       110       120
pF1KB7 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
            60        70        80        90       100       110   

              130       140       150       160       170       
pF1KB7 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
           120       130       140       150       160       170

>>CCDS46908.1 CNBP gene_id:7555|Hs108|chr3                (172 aa)
 initn: 1066 init1: 808 opt: 1260  Z-score: 900.8  bits: 173.1 E(32554): 7.5e-44
Smith-Waterman score: 1260; 95.0% identity (95.0% similar) in 179 aa overlap (1-177:1-172)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       :::::::::::::::::::::::::::::::::::       ::::::::::::::::::
CCDS46 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES
               10        20        30               40        50   

               70          80        90       100       110        
pF1KB7 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
       ::::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
            60        70        80        90       100       110   

      120       130       140       150       160       170       
pF1KB7 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
           120       130       140       150       160       170  

>>CCDS14425.1 ZCCHC13 gene_id:389874|Hs108|chrX           (166 aa)
 initn: 750 init1: 628 opt: 744  Z-score: 543.1  bits: 106.9 E(32554): 6.3e-24
Smith-Waterman score: 744; 66.4% identity (80.3% similar) in 152 aa overlap (1-152:1-145)

               10        20        30        40        50        60
pF1KB7 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
       :::.. : ::.:::::: :: ::. ::  :. :.:     :: :  :..:   :: ::::
CCDS14 MSSKDFFACGHSGHWARGCPRGGAGGR--RGGGHG-----RGSQCGSTTLSYTCYCCGES
               10        20          30             40        50   

               70        80        90       100       110       120
pF1KB7 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
       :. ::.: :  . ::::::.::::::::.:::::.: ::.::. ::::::::.  :::::
CCDS14 GRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCY
            60        70        80        90       100       110   

              130       140       150       160       170       
pF1KB7 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
       :::..:::::::..:::::::: :::::::::                         
CCDS14 SCGKLGHIQKDCAQVKCYRCGEIGHVAINCSKARPGQLLPLRQIPTSSQGMSQ    
           120       130       140       150       160          




177 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:32:41 2016 done: Fri Nov  4 08:32:41 2016
 Total Scan time:  1.700 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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