FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7549, 193 aa 1>>>pF1KB7549 193 - 193 aa - 193 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1435+/-0.000909; mu= 13.0315+/- 0.054 mean_var=51.3884+/-10.285, 0's: 0 Z-trim(103.4): 23 B-trim: 0 in 0/50 Lambda= 0.178913 statistics sampled from 7395 (7399) to 7395 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.227), width: 16 Scan time: 1.760 The best scores are: opt bits E(32554) CCDS10793.1 CFAP20 gene_id:29105|Hs108|chr16 ( 193) 1281 338.5 1.6e-93 >>CCDS10793.1 CFAP20 gene_id:29105|Hs108|chr16 (193 aa) initn: 1281 init1: 1281 opt: 1281 Z-score: 1792.6 bits: 338.5 E(32554): 1.6e-93 Smith-Waterman score: 1281; 100.0% identity (100.0% similar) in 193 aa overlap (1-193:1-193) 10 20 30 40 50 60 pF1KB7 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 130 140 150 160 170 180 190 pF1KB7 FKLYLPVQNKAKQ ::::::::::::: CCDS10 FKLYLPVQNKAKQ 190 193 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 08:37:53 2016 done: Fri Nov 4 08:37:54 2016 Total Scan time: 1.760 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]