Result of FASTA (omim) for
pF1KB7556
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7556, 271 aa
1>>>pF1KB7556 271 - 271 aa - 271 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8829+/-0.000297; mu= 2.6257+/- 0.019
mean_var=253.9081+/-49.429, 0's: 0 Z-trim(126.7): 47 B-trim: 66 in 1/58
Lambda= 0.080489
statistics sampled from 53352 (53423) to 53352 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.875), E-opt: 0.2 (0.626), width: 16
Scan time: 8.750
The best scores are: opt bits E(85289)
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271) 1878 229.7 4.6e-60
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 1177 148.1 1.2e-35
NP_001287786 (OMIM: 136515) fos-related antigen 1 ( 169) 920 118.2 1e-26
NP_001287773 (OMIM: 136515) fos-related antigen 1 ( 235) 915 117.8 1.9e-26
NP_001287784 (OMIM: 136515) fos-related antigen 1 ( 135) 735 96.7 2.5e-20
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326) 487 68.2 2.2e-11
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287) 478 67.1 4.1e-11
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380) 468 66.1 1.1e-10
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338) 441 62.9 9.1e-10
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237) 423 60.7 3e-09
XP_005264288 (OMIM: 601575) PREDICTED: fos-related ( 205) 308 47.2 2.9e-05
XP_006712039 (OMIM: 601575) PREDICTED: fos-related ( 343) 308 47.5 4.1e-05
XP_006712040 (OMIM: 601575) PREDICTED: fos-related ( 304) 299 46.4 7.8e-05
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 284 44.4 0.00018
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 284 44.4 0.00018
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 284 44.5 0.0002
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 279 43.7 0.00021
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 279 43.7 0.00021
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 280 43.9 0.00023
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 280 43.9 0.00023
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 280 43.9 0.00023
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 280 43.9 0.00023
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 280 43.9 0.00023
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 280 43.9 0.00023
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 280 43.9 0.00023
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 279 43.8 0.00027
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 279 43.8 0.00027
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 279 43.8 0.00027
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 279 43.8 0.00027
NP_001107643 (OMIM: 164772) protein fosB isoform 2 ( 302) 283 44.5 0.00028
>>NP_005429 (OMIM: 136515) fos-related antigen 1 isoform (271 aa)
initn: 1878 init1: 1878 opt: 1878 Z-score: 1199.3 bits: 229.7 E(85289): 4.6e-60
Smith-Waterman score: 1878; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
190 200 210 220 230 240
250 260 270
pF1KB7 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
:::::::::::::::::::::::::::::::
NP_005 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
250 260 270
>>NP_001287785 (OMIM: 136515) fos-related antigen 1 isof (205 aa)
initn: 1155 init1: 1155 opt: 1177 Z-score: 761.0 bits: 148.1 E(85289): 1.2e-35
Smith-Waterman score: 1245; 75.6% identity (75.6% similar) in 271 aa overlap (1-271:1-205)
10 20 30 40 50 60
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
:::::::::::::::::::::::::::::::::
NP_001 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQ---------------------------
10 20 30
70 80 90 100 110 120
pF1KB7 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
:::::::::::::::::::::
NP_001 ---------------------------------------ISPEEEERRRVRRERNKLAAA
40 50
130 140 150 160 170 180
pF1KB7 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
60 70 80 90 100 110
190 200 210 220 230 240
pF1KB7 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
120 130 140 150 160 170
250 260 270
pF1KB7 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
:::::::::::::::::::::::::::::::
NP_001 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
180 190 200
>>NP_001287786 (OMIM: 136515) fos-related antigen 1 isof (169 aa)
initn: 920 init1: 920 opt: 920 Z-score: 600.8 bits: 118.2 E(85289): 1e-26
Smith-Waterman score: 941; 62.4% identity (62.4% similar) in 271 aa overlap (1-271:1-169)
10 20 30 40 50 60
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
:::::::::::::::::::::::::::::::::
NP_001 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQ---------------------------
10 20 30
70 80 90 100 110 120
pF1KB7 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
NP_001 ------------------------------------------------------------
130 140 150 160 170 180
pF1KB7 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 ---------------ETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
40 50 60 70
190 200 210 220 230 240
pF1KB7 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
80 90 100 110 120 130
250 260 270
pF1KB7 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
:::::::::::::::::::::::::::::::
NP_001 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
140 150 160
>>NP_001287773 (OMIM: 136515) fos-related antigen 1 isof (235 aa)
initn: 915 init1: 915 opt: 915 Z-score: 595.8 bits: 117.8 E(85289): 1.9e-26
Smith-Waterman score: 1564; 86.7% identity (86.7% similar) in 271 aa overlap (1-271:1-235)
10 20 30 40 50 60
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
:::::::::::::::::::::::::::::::::::::::
NP_001 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQ---------------------
70 80 90
130 140 150 160 170 180
pF1KB7 KCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 ---------------ETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKE
100 110 120 130 140
190 200 210 220 230 240
pF1KB7 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPST
150 160 170 180 190 200
250 260 270
pF1KB7 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
:::::::::::::::::::::::::::::::
NP_001 PEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
210 220 230
>>NP_001287784 (OMIM: 136515) fos-related antigen 1 isof (135 aa)
initn: 732 init1: 732 opt: 735 Z-score: 485.9 bits: 96.7 E(85289): 2.5e-20
Smith-Waterman score: 735; 77.9% identity (83.6% similar) in 140 aa overlap (1-138:1-135)
10 20 30 40 50 60
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAA
::::::::::::::::::::::::::::::::::::::: . . ..: :. :
NP_001 PSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQPGGRGAPPSKARAEQ-----A
70 80 90 100 110
130 140 150 160 170
pF1KB7 KCRNRRK--ELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGA
: . .. : :: : : :
NP_001 GCGQVQEPEEGTDRLPAGGD
120 130
>>NP_005244 (OMIM: 601575) fos-related antigen 2 [Homo s (326 aa)
initn: 546 init1: 413 opt: 487 Z-score: 325.4 bits: 68.2 E(85289): 2.2e-11
Smith-Waterman score: 746; 46.0% identity (65.2% similar) in 328 aa overlap (1-267:1-322)
10 20 30 40
pF1KB7 MFRDFGEPGP-SSGNGGGYGGPAQPPAAAQAA--QQKFHL---------VPSINTMSGSQ
:..:. :: .... :. :.::. . .... ::::.. .:.::... ::
NP_005 MYQDY--PGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQ
10 20 30 40 50
50 60 70 80 90
pF1KB7 ELQWMVQPHFLGPSSYPRPLTYPQYSP-PQ----------PRPGVIRALGPPPGVRRRPC
.::::::: . : : : ..: ::: : ::::::...: : :::
NP_005 DLQWMVQPTVITSMSNPYPRSHP-YSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRD-
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB7 EQISPEEEERRRVRRERNKLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQ
::.::::::.::.::::::::::::::::.:::. :::::..::.::::::.:: ::::.
NP_005 EQLSPEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKE
120 130 140 150 160 170
160 170 180
pF1KB7 KERLELVLEAHRPICKI-PE----------------GAKEG-----------DTGSTSGT
::.::..: :: :.::: :: :.. : :. :.:..
NP_005 KEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSA
180 190 200 210 220 230
190 200 210 220 230 240
pF1KB7 SSPPAPCRPVPCISLSPGPVLEPEALHTPTLMT-TPSLTPFTPSLVFTYPS-----TP--
. : . ::.. : : : :::: ..: ::..:: : .::::::: .:
NP_005 GLDKAQRSVIKPISIAGGFYGE-EPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPAS
240 250 260 270 280 290
250 260 270
pF1KB7 --EPCASAHRKSSSSSGDPSSDPLGSPTLLAL
: :..:::.:::: :: ::: :.:::
NP_005 PSESCSKAHRRSSSS-GDQSSDSLNSPTLLAL
300 310 320
>>XP_016859226 (OMIM: 601575) PREDICTED: fos-related ant (287 aa)
initn: 546 init1: 413 opt: 478 Z-score: 320.4 bits: 67.1 E(85289): 4.1e-11
Smith-Waterman score: 718; 49.6% identity (66.4% similar) in 280 aa overlap (37-267:8-283)
10 20 30 40 50 60
pF1KB7 EPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLGPSSYPR
..:.::... ::.::::::: . : :
XP_016 MPGSGSAFIPTINAITTSQDLQWMVQPTVITSMSNPY
10 20 30
70 80 90 100 110
pF1KB7 PLTYPQYSP-PQ----------PRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERN
: ..: ::: : ::::::...: : ::: ::.::::::.::.:::::
XP_016 PRSHP-YSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRD-EQLSPEEEEKRRIRRERN
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 KLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKI-
:::::::::::.:::. :::::..::.::::::.:: ::::.::.::..: :: :.:::
XP_016 KLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGPVCKIS
100 110 120 130 140 150
180 190 200
pF1KB7 PE----------------GAKEG-----------DTGSTSGTSSPPAPCRPVPCISLSPG
:: :.. : :. :.:... : . ::.. :
XP_016 PEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPISIAGG
160 170 180 190 200 210
210 220 230 240 250
pF1KB7 PVLEPEALHTPTLMT-TPSLTPFTPSLVFTYPS-----TP----EPCASAHRKSSSSSGD
: : :::: ..: ::..:: : .::::::: .: : :..:::.:::: ::
XP_016 FYGE-EPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESCSKAHRRSSSS-GD
220 230 240 250 260 270
260 270
pF1KB7 PSSDPLGSPTLLAL
::: :.:::
XP_016 QSSDSLNSPTLLAL
280
>>NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Homo sa (380 aa)
initn: 677 init1: 422 opt: 468 Z-score: 312.6 bits: 66.1 E(85289): 1.1e-10
Smith-Waterman score: 536; 42.2% identity (65.8% similar) in 237 aa overlap (36-251:59-288)
10 20 30 40 50 60
pF1KB7 GEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG---PS
...:.....: : .:::.::: ... ::
NP_005 YYHSPADSFSSMGSPVNAQDFCTDLAVSSANFIPTVTAISTSPDLQWLVQPALVSSVAPS
30 40 50 60 70 80
70 80 90 100 110
pF1KB7 SY--PRPLTYPQYSP-PQPRPGVIRAL--GPPPGVRRR-PCEQISPEEEERRRVRRERNK
. :.:. : : : ::.... : .. :: ::.::::::.::.::::::
NP_005 QTRAPHPFGVPAPSAGAYSRAGVVKTMTGGRAQSIGRRGKVEQLSPEEEEKRRIRRERNK
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 LAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPE
.:::::::::.:::: ::::::.::::::.:: :: .: :.::.::..: :::: ::::.
NP_005 MAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAHRPACKIPD
150 160 170 180 190 200
180 190 200 210 220
pF1KB7 G---AKEGDTGSTSGTSSPPAPCRP-------VPCISLS-PGPVLEP-EALHTPTLMTTP
.: ...: . :.. : : .: .. : : .:: ... . : : :
NP_005 DLGFPEEMSVASLDLTGGLPEVATPESEEAFTLPLLNDPEPKPSVEPVKSISSMELKTEP
210 220 230 240 250 260
230 240 250 260 270
pF1KB7 SLTPFTPSLVFTYPSTPEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
: : .:.. .: .: .:
NP_005 ----FDD---FLFPASSRPSGSETARSVPDMDLSGSFYAADWEPLHSGSLGMGPMATELE
270 280 290 300 310 320
>>NP_006723 (OMIM: 164772) protein fosB isoform 1 [Homo (338 aa)
initn: 477 init1: 400 opt: 441 Z-score: 296.3 bits: 62.9 E(85289): 9.1e-10
Smith-Waterman score: 561; 40.5% identity (59.2% similar) in 311 aa overlap (18-271:32-338)
10 20 30 40
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAA---QQKFHLVPSINTM
.:.: :. . : .. .::.....
NP_006 FQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTAI
10 20 30 40 50 60
50 60 70 80
pF1KB7 SGSQELQWMVQPHFLGP--SSYPRPL-TYPQYSPPQPRPGVIRAL---------------
. ::.:::.::: ... .: .:: . : : ::. .
NP_006 TTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSG
70 80 90 100 110 120
90 100 110 120 130
pF1KB7 ---------GPPPG--VR---RRPCEQ-ISPEEEERRRVRRERNKLAAAKCRNRRKELTD
:: :. .: ::: :. ..:::::.:::::::::::::::::::.::::
NP_006 GPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTD
130 140 150 160 170 180
140 150 160 170 180
pF1KB7 FLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIP--EGAKEGDT------
::::::.::.::. :. :: ::::.:::::.:: ::.: :::: :: :
NP_006 RLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRDL
190 200 210 220 230 240
190 200 210 220 230
pF1KB7 -GST----SGTS--SPPAPCRPVPCISLSPGPVLEPEALHTPTLMTT-----PSLTP-FT
::. .: : :: : :.: . . .: .: : . . . : ..: .:
NP_006 PGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSYT
250 260 270 280 290 300
240 250 260 270
pF1KB7 PSLVFTYPSTPEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
:.:.: :: : : . .:.: .:: :::.::.::::
NP_006 SSFVLT---CPEVSAFAGAQRTSGSDQPS-DPLNSPSLLAL
310 320 330
>>XP_005258748 (OMIM: 164772) PREDICTED: protein fosB is (237 aa)
initn: 477 init1: 400 opt: 423 Z-score: 287.0 bits: 60.7 E(85289): 3e-09
Smith-Waterman score: 472; 45.0% identity (63.4% similar) in 202 aa overlap (18-181:32-233)
10 20 30 40
pF1KB7 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAA---QQKFHLVPSINTM
.:.: :. . : .. .::.....
XP_005 FQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTAI
10 20 30 40 50 60
50 60 70 80
pF1KB7 SGSQELQWMVQPHFLGP--SSYPRPL-TYPQYSPPQPRPGVIRAL---------------
. ::.:::.::: ... .: .:: . : : ::. .
XP_005 TTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSG
70 80 90 100 110 120
90 100 110 120 130
pF1KB7 ---------GPPPG--VR---RRPCEQ-ISPEEEERRRVRRERNKLAAAKCRNRRKELTD
:: :. .: ::: :. ..:::::.:::::::::::::::::::.::::
XP_005 GPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTD
130 140 150 160 170 180
140 150 160 170 180
pF1KB7 FLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIP--EGAKEGDTGSTSGT
::::::.::.::. :. :: ::::.:::::.:: ::.: :::: :: :
XP_005 RLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAE
190 200 210 220 230
190 200 210 220 230 240
pF1KB7 SSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSLTPFTPSLVFTYPSTPEPCASAHR
271 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:40:48 2016 done: Fri Nov 4 08:40:49 2016
Total Scan time: 8.750 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]