FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7571, 205 aa
  1>>>pF1KB7571 205 - 205 aa - 205 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.8509+/-0.000747; mu= 1.1435+/- 0.046
 mean_var=227.9226+/-45.431, 0's: 0 Z-trim(118.1): 7  B-trim: 321 in 1/54
 Lambda= 0.084953
 statistics sampled from 18917 (18924) to 18917 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.581), width:  16
 Scan time:  2.310

The best scores are:                                      opt bits E(32554)
CCDS8123.1 DRAP1 gene_id:10589|Hs108|chr11         ( 205) 1387 181.1 4.3e-46


>>CCDS8123.1 DRAP1 gene_id:10589|Hs108|chr11              (205 aa)
 initn: 1387 init1: 1387 opt: 1387  Z-score: 941.0  bits: 181.1 E(32554): 4.3e-46
Smith-Waterman score: 1387; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KB7 MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 NAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKPGSGGRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKPGSGGRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NGGMGTKSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHPSAHFQSPPTPFLPFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NGGMGTKSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHPSAHFQSPPTPFLPFA
              130       140       150       160       170       180

              190       200     
pF1KB7 STLPLPPAPPGPSAPDEEDEEDYDS
       :::::::::::::::::::::::::
CCDS81 STLPLPPAPPGPSAPDEEDEEDYDS
              190       200     




205 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:47:02 2016 done: Fri Nov  4 08:47:03 2016
 Total Scan time:  2.310 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]