Result of FASTA (omim) for
pF1KB7584
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7584, 287 aa
1>>>pF1KB7584 287 - 287 aa - 287 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0723+/-0.000345; mu= 1.2845+/- 0.022
mean_var=285.8796+/-57.932, 0's: 0 Z-trim(124.1): 224 B-trim: 39 in 1/56
Lambda= 0.075855
statistics sampled from 44893 (45169) to 44893 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.823), E-opt: 0.2 (0.53), width: 16
Scan time: 7.790
The best scores are: opt bits E(85289)
NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 1983 229.3 6.5e-60
NP_005212 (OMIM: 220600,600028) homeobox protein D ( 289) 888 109.5 7.7e-24
NP_004396 (OMIM: 126255) homeobox protein DLX-2 [H ( 328) 735 92.8 9.2e-19
XP_005250242 (OMIM: 220600,600028) PREDICTED: home ( 161) 624 80.3 2.6e-15
XP_016867292 (OMIM: 220600,600028) PREDICTED: home ( 161) 624 80.3 2.6e-15
NP_005213 (OMIM: 600030) homeobox protein DLX-6 [H ( 293) 473 64.1 3.6e-10
NP_835221 (OMIM: 600029) homeobox protein DLX-1 is ( 255) 466 63.3 5.6e-10
NP_612138 (OMIM: 601911,616788) homeobox protein D ( 240) 406 56.7 5.1e-08
XP_016879780 (OMIM: 601911,616788) PREDICTED: home ( 168) 394 55.2 1e-07
NP_001925 (OMIM: 601911,616788) homeobox protein D ( 168) 394 55.2 1e-07
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 284 43.4 0.00063
NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 282 43.1 0.00067
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 283 43.4 0.00074
XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 275 42.3 0.001
NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 277 42.7 0.0011
NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 275 42.4 0.0012
NP_036608 (OMIM: 604295) ventral anterior homeobox ( 290) 269 41.8 0.0019
NP_005513 (OMIM: 142955,601536) homeobox protein H ( 335) 270 41.9 0.0019
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284) 264 41.2 0.0027
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 267 41.7 0.003
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 267 41.7 0.003
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 267 41.7 0.003
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 267 41.7 0.003
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 267 41.7 0.003
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 267 41.7 0.003
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 267 41.7 0.003
NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 263 41.1 0.0031
NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 257 40.4 0.0041
NP_064447 (OMIM: 605212) barH-like 2 homeobox prot ( 387) 260 40.9 0.0046
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 253 39.9 0.0054
XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 254 40.1 0.0057
NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 254 40.1 0.0057
NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 254 40.2 0.0064
NP_001317252 (OMIM: 142966) homeobox protein Hox-B ( 299) 250 39.7 0.0082
NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 251 39.9 0.0087
NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 247 39.3 0.0092
XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 250 39.8 0.0093
NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 250 39.8 0.0093
>>NP_005211 (OMIM: 104510,190320,600525) homeobox protei (287 aa)
initn: 1983 init1: 1983 opt: 1983 Z-score: 1196.6 bits: 229.3 E(85289): 6.5e-60
Smith-Waterman score: 1983; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAPQHDYYSGQPYGQTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAPQHDYYSGQPYGQTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 NPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYGAYREQPLPAQDPVSVKEEPEAEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYGAYREQPLPAQDPVSVKEEPEAEVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSAS
190 200 210 220 230 240
250 260 270 280
pF1KB7 PSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHASPGPPPNPGAVY
:::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHASPGPPPNPGAVY
250 260 270 280
>>NP_005212 (OMIM: 220600,600028) homeobox protein DLX-5 (289 aa)
initn: 816 init1: 629 opt: 888 Z-score: 549.0 bits: 109.5 E(85289): 7.7e-24
Smith-Waterman score: 888; 53.8% identity (73.6% similar) in 288 aa overlap (1-274:1-279)
10 20 30 40 50
pF1KB7 MSGSFDRKLSSILTD-----ISSSLSCHAGSKDSPTLPESSVTDLGYYS----APQHDYY
:.: :::.. :: . ...: . : :..::::::::.:: ::: :: : :
NP_005 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAP-HGYC
10 20 30 40 50
60 70 80 90 100
pF1KB7 S--GQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYG-AYREQPLPAQDP
: . ::...::: :... ..:: ::. . ..:.:..::.::: :: . : ...:
NP_005 SPTSASYGKALNPYQYQYH-GVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB7 VSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGL
:: : :::::::::::::::::::::.:::::::::::.:::::::::::::.:::
NP_005 --EKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 TQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPAR
:::::::::::.:::.::..::::.: ::::..:: :::::: :::.:. .. : .
NP_005 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHH
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 SQLPPPLP-YSASPSYLDDPTNSWYHAQNLS-GPHLQQQPPQPATLHHASPGPPPNPGAV
. :: : . :::.. . ::: . : . :: :: :..:.:
NP_005 PHAHPPTSNQSPASSYLEN-SASWYTSAASSINSHL---PP-PGSLQHPLALASGTLY
240 250 260 270 280
pF1KB7 Y
>>NP_004396 (OMIM: 126255) homeobox protein DLX-2 [Homo (328 aa)
initn: 700 init1: 532 opt: 735 Z-score: 457.8 bits: 92.8 E(85289): 9.2e-19
Smith-Waterman score: 754; 47.8% identity (65.4% similar) in 295 aa overlap (17-287:42-328)
10 20 30 40
pF1KB7 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAP
::: : : ..::::: :..:: .::.
NP_004 MHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHK-PQESPTLPVSTATDSSYYTNQ
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 QHDYYSGQPYGQTVNPYTYH--HQFNLNGLAGTGAYSPKSEYTYG--ASYRQYGAYREQP
:: .: : .::.. .:.. .:: .. :: :: : : :.: .:. : .
NP_004 QHPAGGGGGGG---SPYAHMGSYQYQASGLNNV-PYSAKSSYDLGYTAAYTSYAPYGTSS
80 90 100 110 120
110 120 130 140 150 160
pF1KB7 LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL
::.. ::. : :.:.:::::::::::::::::.:::::::::::.:::::::::::
NP_004 SPANNEPE-KEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL
130 140 150 160 170 180
170 180 190 200 210
pF1KB7 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPP--SPALWD---
::.:::::::::::::::::::::..:.::.: :. :. : : : ::: .:: ::
NP_004 AASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGV
190 200 210 220 230 240
220 230 240 250 260
pF1KB7 ---TSSHSTPAPARSQLPPP--LPYSASPSYLDDPTNSWYHAQNLSGPHLQQ--------
.. . :. . : : ::. ..: . ::: . :. :::
NP_004 PQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGN--YPWYHQTSGSASHLQATAPLLHPT
250 260 270 280 290 300
270 280
pF1KB7 QPPQPATLHH--ASPGPPPNPGAVY
: ::: :: .. : : . :...
NP_004 QTPQPHHHHHHHGGGGAPVSAGTIF
310 320
>>XP_005250242 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 613 init1: 597 opt: 624 Z-score: 396.0 bits: 80.3 E(85289): 2.6e-15
Smith-Waterman score: 624; 64.1% identity (80.1% similar) in 156 aa overlap (121-274:1-151)
100 110 120 130 140 150
pF1KB7 SYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQK
::::::::::::::::::.:::::::::::
XP_005 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
160 170 180 190 200 210
pF1KB7 AQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSP
.:::::::::::::.::::::::::::::.:::.::..::::.: ::::..:: ::::::
XP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
220 230 240 250 260
pF1KB7 PSPALWDTSSHSTPAPARSQLPPPLP-YSASPSYLDDPTNSWYHAQNLS-GPHLQQQPPQ
:::.:. .. : . . :: : . :::.. . ::: . : . :: ::
XP_005 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLEN-SASWYTSAASSINSHL---PP-
100 110 120 130 140
270 280
pF1KB7 PATLHHASPGPPPNPGAVY
:..:.:
XP_005 PGSLQHPLALASGTLY
150 160
>>XP_016867292 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 613 init1: 597 opt: 624 Z-score: 396.0 bits: 80.3 E(85289): 2.6e-15
Smith-Waterman score: 624; 64.1% identity (80.1% similar) in 156 aa overlap (121-274:1-151)
100 110 120 130 140 150
pF1KB7 SYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQK
::::::::::::::::::.:::::::::::
XP_016 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
160 170 180 190 200 210
pF1KB7 AQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSP
.:::::::::::::.::::::::::::::.:::.::..::::.: ::::..:: ::::::
XP_016 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
220 230 240 250 260
pF1KB7 PSPALWDTSSHSTPAPARSQLPPPLP-YSASPSYLDDPTNSWYHAQNLS-GPHLQQQPPQ
:::.:. .. : . . :: : . :::.. . ::: . : . :: ::
XP_016 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLEN-SASWYTSAASSINSHL---PP-
100 110 120 130 140
270 280
pF1KB7 PATLHHASPGPPPNPGAVY
:..:.:
XP_016 PGSLQHPLALASGTLY
150 160
>>NP_005213 (OMIM: 600030) homeobox protein DLX-6 [Homo (293 aa)
initn: 423 init1: 388 opt: 473 Z-score: 303.5 bits: 64.1 E(85289): 3.6e-10
Smith-Waterman score: 483; 41.1% identity (64.0% similar) in 258 aa overlap (30-268:52-291)
10 20 30 40 50
pF1KB7 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSA--PQHDYYSGQPYG
: :.:. .. .. .: : : .:. .
NP_005 MEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPAMAGAHYPLHCLHSAAAAA
30 40 50 60 70 80
60 70 80 90 100
pF1KB7 QTVNPYTYHHQFNLNG---LAGTG-AYSPKSEYTYG-ASYRQYG----AYREQPLPAQ--
. . . .::: . .: .: : .:. .: .: :. :.. .:... ::
NP_005 AAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAAAQTR
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB7 -DPVSVKEEP---EAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL
: .. .. ..:.:. ::: ::.::::::::: :: ::..:::..:::::::::::
NP_005 GDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAEL
150 160 170 180 190 200
170 180 190 200 210 220
pF1KB7 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSP-NNSDSMACNSPPSPALWDTSSH
::.::::::::::::::.::::::: :.: : : .: ..: ... :: : .::.:
NP_005 AASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQGSAALSPRSPALPPVWDVS--
210 220 230 240 250
230 240 250 260 270 280
pF1KB7 STPAPARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQ-QQPPQPATLHHASPGPP
: :.. :: : :.: . :: :.:: . .: ::
NP_005 ---ASAKGVSMPPNSYM--PGY-----SHWY-----SSPHQDTMQRPQMM
260 270 280 290
pF1KB7 PNPGAVY
>>NP_835221 (OMIM: 600029) homeobox protein DLX-1 isofor (255 aa)
initn: 457 init1: 388 opt: 466 Z-score: 300.1 bits: 63.3 E(85289): 5.6e-10
Smith-Waterman score: 477; 41.0% identity (60.5% similar) in 266 aa overlap (3-262:24-254)
10 20 30
pF1KB7 MSGSFDRKLS-SILTDISSSLSC-HAGSKDSPTLPESSV
: ....: : .. :. : :......:
NP_835 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPSPMSHGHYSMHCLHSAGHSQP-------
10 20 30 40 50
40 50 60 70 80 90
pF1KB7 TDLGYYSAPQHDYYSGQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYGA
: .: :: . . : :: :: . : :.. : . : .:: : .
NP_835 -DGAYSSASSFSRPLGYPY---VNSVSSH--------ASSPYISSVQSYPGSASLAQ--S
60 70 80 90
100 110 120 130 140 150
pF1KB7 YREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALP
:.: .. .: : .:::. ::: ::.::::::::: :: ::.::::..::::::
NP_835 RLEDPGADSEKSTVVEG--GEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALP
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB7 ERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSP-NNSDSMACNSPPSPALW
:::::::.::::::::::::::.:::::::.:.: . :: : :. ... .::: : :
NP_835 ERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPVPPGW
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB7 DTSSHSTPAPARSQLPPPLPYSASPSYLDDPTNSWY---HAQNLSGPHLQQQPPQPATLH
. .: : . . . : ::: .::: : . .. :.:
NP_835 NPNSSSGKGSGGNA------GSYIPSY-----TSWYPSAHQEAMQQPQLM
220 230 240 250
280
pF1KB7 HASPGPPPNPGAVY
>>NP_612138 (OMIM: 601911,616788) homeobox protein DLX-4 (240 aa)
initn: 390 init1: 342 opt: 406 Z-score: 264.9 bits: 56.7 E(85289): 5.1e-08
Smith-Waterman score: 411; 41.6% identity (58.8% similar) in 221 aa overlap (18-223:2-212)
10 20 30 40 50 60
pF1KB7 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAPQHDYYSGQPYGQTV
.:: : ..:. .. :: :: . .. : : .
NP_612 MTSLPCPLPGRDA---SKAVFPDL----APVPSVAAAYPLG--L
10 20 30
70 80 90 100 110
pF1KB7 NPYTYHHQFNLNGLAGTG---AYSPKSEYTYGASYR--QYGAYREQPL--PAQDPVSVKE
.: : ::. : .: . : :: : : ::: ::. : ..
NP_612 SPTTAASP-NLSYSRPYGHLLSYPYTEPANPGDSYLSCQQPAALSQPLCGPAEHPQELEA
40 50 60 70 80 90
120 130 140 150 160
pF1KB7 E-------PEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQL
. :: : .. ::.::::::::: :: :..:::..:::::::::.:::::
NP_612 DSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQL
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB7 GLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHS-PNNSDSMACNSPPSPALWDTSSHSTPA
:::::::::::::.:::.::: :.. : . :. . :.. ::: :.::: . .:
NP_612 GLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLP
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 PARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHASPGPPPNPGA
NP_612 TSGYGNSFGAWYQHHSSDVLASPQMM
220 230 240
>>XP_016879780 (OMIM: 601911,616788) PREDICTED: homeobox (168 aa)
initn: 406 init1: 342 opt: 394 Z-score: 259.7 bits: 55.2 E(85289): 1e-07
Smith-Waterman score: 394; 59.1% identity (77.3% similar) in 110 aa overlap (115-223:31-140)
90 100 110 120 130 140
pF1KB7 EYTYGASYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAAL
:: : .. ::.::::::::: :: :
XP_016 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHL
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 QRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHS-PNNSD
..:::..:::::::::.::::::::::::::::::.:::.::: :.. : . :. .
XP_016 NQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTF
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB7 SMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQ
:.. ::: :.::: . .:
XP_016 SVSPCSPPLPSLWDLPKAGTLPTSGYGNSFGAWYQHHSSDVLASPQMM
130 140 150 160
>>NP_001925 (OMIM: 601911,616788) homeobox protein DLX-4 (168 aa)
initn: 406 init1: 342 opt: 394 Z-score: 259.7 bits: 55.2 E(85289): 1e-07
Smith-Waterman score: 394; 59.1% identity (77.3% similar) in 110 aa overlap (115-223:31-140)
90 100 110 120 130 140
pF1KB7 EYTYGASYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAAL
:: : .. ::.::::::::: :: :
NP_001 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHL
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 QRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHS-PNNSD
..:::..:::::::::.::::::::::::::::::.:::.::: :.. : . :. .
NP_001 NQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTF
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB7 SMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQ
:.. ::: :.::: . .:
NP_001 SVSPCSPPLPSLWDLPKAGTLPTSGYGNSFGAWYQHHSSDVLASPQMM
130 140 150 160
287 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:17:04 2016 done: Fri Nov 4 20:17:05 2016
Total Scan time: 7.790 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]