Result of FASTA (ccds) for
pF1KB7600
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7600, 434 aa
1>>>pF1KB7600 434 - 434 aa - 434 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2056+/-0.00105; mu= 9.0082+/- 0.063
mean_var=125.5730+/-24.576, 0's: 0 Z-trim(107.6): 26 B-trim: 7 in 1/50
Lambda= 0.114453
statistics sampled from 9664 (9682) to 9664 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.297), width: 16
Scan time: 3.250
The best scores are: opt bits E(32554)
CCDS12137.1 PLIN3 gene_id:10226|Hs108|chr19 ( 434) 2740 463.8 1.5e-130
CCDS59338.1 PLIN3 gene_id:10226|Hs108|chr19 ( 433) 2721 460.7 1.3e-129
CCDS59337.1 PLIN3 gene_id:10226|Hs108|chr19 ( 422) 1953 333.9 1.9e-91
CCDS6490.1 PLIN2 gene_id:123|Hs108|chr9 ( 437) 1170 204.6 1.6e-52
CCDS42473.1 PLIN5 gene_id:440503|Hs108|chr19 ( 463) 699 126.8 4.3e-29
CCDS10353.1 PLIN1 gene_id:5346|Hs108|chr15 ( 522) 389 75.7 1.2e-13
>>CCDS12137.1 PLIN3 gene_id:10226|Hs108|chr19 (434 aa)
initn: 2740 init1: 2740 opt: 2740 Z-score: 2457.5 bits: 463.8 E(32554): 1.5e-130
Smith-Waterman score: 2740; 99.8% identity (100.0% similar) in 434 aa overlap (1-434:1-434)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQM
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS12 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQVLSLMETVKQGVDQKLVEGQEKLHQM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
370 380 390 400 410 420
430
pF1KB7 FAPGITEKAPEEKK
::::::::::::::
CCDS12 FAPGITEKAPEEKK
430
>>CCDS59338.1 PLIN3 gene_id:10226|Hs108|chr19 (433 aa)
initn: 2015 init1: 2015 opt: 2721 Z-score: 2440.6 bits: 460.7 E(32554): 1.3e-129
Smith-Waterman score: 2721; 99.5% identity (99.8% similar) in 434 aa overlap (1-434:1-433)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQM
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS59 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQVLSLMETVKQGVDQKLVEGQEKLHQM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS59 WLSWNQKQLQGPEKEPPKPE-VESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
310 320 330 340 350
370 380 390 400 410 420
pF1KB7 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
360 370 380 390 400 410
430
pF1KB7 FAPGITEKAPEEKK
::::::::::::::
CCDS59 FAPGITEKAPEEKK
420 430
>>CCDS59337.1 PLIN3 gene_id:10226|Hs108|chr19 (422 aa)
initn: 1949 init1: 1949 opt: 1953 Z-score: 1755.4 bits: 333.9 E(32554): 1.9e-91
Smith-Waterman score: 2640; 97.0% identity (97.2% similar) in 434 aa overlap (1-434:1-422)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKV---
70 80 90 100 110
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ---------SGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
120 130 140 150 160
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQM
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS59 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQVLSLMETVKQGVDQKLVEGQEKLHQM
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
350 360 370 380 390 400
430
pF1KB7 FAPGITEKAPEEKK
::::::::::::::
CCDS59 FAPGITEKAPEEKK
410 420
>>CCDS6490.1 PLIN2 gene_id:123|Hs108|chr9 (437 aa)
initn: 1134 init1: 671 opt: 1170 Z-score: 1056.4 bits: 204.6 E(32554): 1.6e-52
Smith-Waterman score: 1170; 42.8% identity (80.7% similar) in 409 aa overlap (22-427:9-411)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
::::: ::...::.::: :..:.:: :::..::..:.::
CCDS64 MASVAVDPQPSVVTRVVNLPLVSSTYDLMSSAYLSTKDQYPYLKSVC
10 20 30 40
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
. ::.::.:.:..:...: ::..::::::: :. :: .:::..:: ::::.::. ...:.
CCDS64 EMAENGVKTITSVAMTSALPIIQKLEPQIAVANTYACKGLDRIEERLPILNQPSTQIVAN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
.: :.. ... :..:::.::. .. ..: :.::: ..:.::::::.:....:.:::
CCDS64 AKGAVTGAKDAVTTTVTGAKDSVASTITGVMDKTKGAVTGSVEKTKSVVSGSINTVLGSR
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
. :.: :::...: ::: ....::::. :: . : ...:::.. :. ::.::::
CCDS64 MMQLVSSGVENALTKSELLVEQYLPLTEEELEKEAKKVEGFDLV------QKPSYYVRLG
170 180 190 200 210 220
250 260 270 280 290
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGV---DQKLVEGQEKL
::: .:...::...:.... .::..:... :: ... :.: ....: .::. ..:.::
CCDS64 SLSTKLHSRAYQQALSRVKEAKQKSQQTISQLHSTVHLIEFARKNVYSANQKIQDAQDKL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 HQMWLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKD
. :. :... : :..:::.:.. :...::::.:: .: :.:::.: :..:
CCDS64 YLSWVEWKRSIGYDDTDESHCAEHIESRTLAIARNLTQQLQTTCHTLLSNIQGVPQNIQD
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 QVQQARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWL
:... .. :. ..: . ::...:.:.:..:. .. . .:.:: ...:...:::..::
CCDS64 QAKHMGVMAGDIYSVFRNAASFKEVSDSLLTSSKGQLQKMKESLDDVMDYLVNNTPLNWL
350 360 370 380 390 400
420 430
pF1KB7 VGPFAPGITEKAPEEKK
:::: : .::
CCDS64 VGPFYPQLTESQNAQDQGAEMDKSSQETQRSEHKTH
410 420 430
>>CCDS42473.1 PLIN5 gene_id:440503|Hs108|chr19 (463 aa)
initn: 919 init1: 343 opt: 699 Z-score: 635.7 bits: 126.8 E(32554): 4.3e-29
Smith-Waterman score: 945; 40.0% identity (69.9% similar) in 425 aa overlap (7-431:5-387)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
:: . .: : :: .::.::...::. .:: : .:...:. .: . ..:
CCDS42 MSEEEAAQIPRSSVWEQDQQ-NVVQRVVALPLVRATCTAVCDVYSAAKDRHPLLGSAC
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
::. : ::. :.. :::.: .:.::.:. . : ::::::::.::.::::.: :
CCDS42 RLAENCVCGLTTRALDHAQPLLEHLQPQLATMNSLACRGLDKLEEKLPFLQQPSETV---
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
:.::::.::.... .:: .: . . .:. .::
CCDS42 ---------------VTSAKDVVASSVTGVVDLARRGRRWSVELKRSVS-----------
120 130 140
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
.::.:: :::: .:. ::.:. ::: .:. .: .:.::..::..:.::::::
CCDS42 ------HAVDVVLEKSEELVDHFLPMTEEELAALAAEAEGPEVGSVEDQRRQQGYFVRLG
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQM
::: :.:. :::::.:::: .:.:::..: ::...: :.. .. :: :.:..
CCDS42 SLSARIRHLAYEHSVGKLRQSKHRAQDTLAQLQETLELIDHMQCGVTPTAPACPGKVHEL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB7 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
: :.:. ::.. . :.: ..:.. :...:.::.: .: ::..:::......:
CCDS42 WGEWGQRP---PESR--RRSQAELETLVLSRSLTQELQGTVEALESSVRGLPAGAQEKVA
270 280 290 300 310
370 380 390 400 410 420
pF1KB7 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
..::.:. ::..:.. . :.:. .. ::..: ::: :. .:...: :.: .:. :::::
CCDS42 EVRRSVDALQTAFADARCFRDVPAAALAEGRGRVAHAHACVDELLELVVQAVPLPWLVGP
320 330 340 350 360 370
430
pF1KB7 FAPGITEKAPEEKK
::: ..:. ::
CCDS42 FAPILVER-PEPLPDLADLVDEVIGGPDPRWAHLDWPAQQRAWEAEHRDGSGNGDGDRMG
380 390 400 410 420 430
>>CCDS10353.1 PLIN1 gene_id:5346|Hs108|chr15 (522 aa)
initn: 340 init1: 313 opt: 389 Z-score: 358.3 bits: 75.7 E(32554): 1.2e-13
Smith-Waterman score: 404; 24.0% identity (63.5% similar) in 367 aa overlap (10-376:6-350)
10 20 30 40 50 60
pF1KB7 MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVC
: : . . : .: .:..:: ..:..:.::. . .:.::::..: . .::
CCDS10 MAVNKGLTLLDGDLP-EQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVC
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLAD
.: ::::.. .. :. . .:.. .: :...:.: : ::::.:::..: :: : ::. ..
CCDS10 NAYEKGVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 TKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSR
:. .:... ::...... .. . : . ::. .: . . .:. .. . ..:
CCDS10 LKDTISTRLR-------SARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTR
120 130 140 150 160
190 200 210 220 230 240
pF1KB7 LGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLG
:... .:.: .::. :. .. :: : : . : : . :. .. . . : . :.:
CCDS10 AGRLASGGADLALGSIEKVVEYLLP-PDKEESAPAP---GHQQAQ-KSPKAKPSLLSRVG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 SLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQM
.:.. : ... . ... :: .: .. . . . .. : .. :.. . ... ..
CCDS10 ALTNTLSRYTVQ-TMA--RALEQ-GHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEV
230 240 250 260 270
310 320 330 340 350 360
pF1KB7 WLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQ
. : .. . :.. . .:..... .. . . . : ... : : .. :
CCDS10 RVPWLHSLAAAQEED--HEDQTDTEGEDTEEEEELETEENKFSEVAALPG-PRGLLGGVA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB7 QARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGP
.. ... ::.:.:..
CCDS10 HTLQKT--LQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNV
340 350 360 370 380 390
434 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:47:53 2016 done: Sat Nov 5 01:47:53 2016
Total Scan time: 3.250 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]