Result of FASTA (omim) for
pF1KB7601
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7601, 292 aa
1>>>pF1KB7601 292 - 292 aa - 292 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4898+/-0.00041; mu= 5.9958+/- 0.025
mean_var=289.2383+/-63.732, 0's: 0 Z-trim(120.1): 1699 B-trim: 83 in 1/52
Lambda= 0.075413
statistics sampled from 32818 (35026) to 32818 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.411), width: 16
Scan time: 7.830
The best scores are: opt bits E(85289)
NP_840101 (OMIM: 612741) zinc finger protein SNAI3 ( 292) 2086 240.2 3.7e-63
NP_003059 (OMIM: 172800,602150,608890) zinc finger ( 268) 837 104.2 2.8e-22
NP_005976 (OMIM: 604238) zinc finger protein SNAI1 ( 264) 687 87.9 2.3e-17
NP_112599 (OMIM: 605858) transcriptional repressor ( 348) 581 76.5 7.9e-14
NP_003442 (OMIM: 601276) zinc finger protein 177 i ( 321) 404 57.2 4.7e-08
NP_001166122 (OMIM: 601276) zinc finger protein 17 ( 481) 407 57.8 4.7e-08
NP_001308284 (OMIM: 611024) zinc finger protein 66 ( 553) 395 56.6 1.3e-07
NP_071386 (OMIM: 611024) zinc finger protein 667 i ( 610) 395 56.7 1.3e-07
XP_011525510 (OMIM: 611024) PREDICTED: zinc finger ( 610) 395 56.7 1.3e-07
XP_011525511 (OMIM: 611024) PREDICTED: zinc finger ( 610) 395 56.7 1.3e-07
NP_001308285 (OMIM: 611024) zinc finger protein 66 ( 610) 395 56.7 1.3e-07
NP_001171680 (OMIM: 616454,616468,616469) zinc fin ( 712) 396 56.9 1.4e-07
NP_079017 (OMIM: 616454,616468,616469) zinc finger ( 720) 396 56.9 1.4e-07
XP_011526674 (OMIM: 611811) PREDICTED: zinc finger ( 434) 391 56.0 1.5e-07
XP_011526673 (OMIM: 611811) PREDICTED: zinc finger ( 476) 391 56.1 1.6e-07
XP_005259991 (OMIM: 194542) PREDICTED: zinc finger ( 503) 391 56.1 1.6e-07
XP_016882360 (OMIM: 194542) PREDICTED: zinc finger ( 503) 391 56.1 1.6e-07
XP_016882860 (OMIM: 611811) PREDICTED: zinc finger ( 519) 391 56.1 1.7e-07
NP_001277013 (OMIM: 612248) zinc finger protein 62 ( 351) 388 55.5 1.7e-07
NP_001277014 (OMIM: 612248) zinc finger protein 62 ( 351) 388 55.5 1.7e-07
XP_011526669 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526668 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526670 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526671 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526667 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_005260155 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526665 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_016882859 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_016882858 (OMIM: 611811) PREDICTED: zinc finger ( 556) 391 56.2 1.7e-07
XP_011526368 (OMIM: 194542) PREDICTED: zinc finger ( 571) 391 56.2 1.7e-07
XP_016882857 (OMIM: 611811) PREDICTED: zinc finger ( 578) 391 56.2 1.8e-07
XP_016882359 (OMIM: 194542) PREDICTED: zinc finger ( 583) 391 56.2 1.8e-07
NP_057348 (OMIM: 194542) zinc finger protein 44 is ( 615) 391 56.2 1.8e-07
XP_011526366 (OMIM: 194542) PREDICTED: zinc finger ( 616) 391 56.2 1.8e-07
XP_011526082 (OMIM: 612248) PREDICTED: zinc finger ( 429) 388 55.7 1.9e-07
NP_001277012 (OMIM: 612248) zinc finger protein 62 ( 429) 388 55.7 1.9e-07
XP_011526364 (OMIM: 194542) PREDICTED: zinc finger ( 653) 391 56.3 1.9e-07
NP_001157748 (OMIM: 194542) zinc finger protein 44 ( 663) 391 56.3 1.9e-07
NP_115809 (OMIM: 611811) zinc finger protein 333 i ( 665) 391 56.3 1.9e-07
XP_011526664 (OMIM: 611811) PREDICTED: zinc finger ( 665) 391 56.3 1.9e-07
XP_016882856 (OMIM: 611811) PREDICTED: zinc finger ( 665) 391 56.3 1.9e-07
NP_660338 (OMIM: 612248) zinc finger protein 627 i ( 461) 388 55.7 1.9e-07
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 383 55.0 2.5e-07
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 383 55.2 2.9e-07
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 383 55.2 2.9e-07
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 383 55.2 2.9e-07
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 383 55.2 2.9e-07
XP_016882570 (OMIM: 194551) PREDICTED: zinc finger ( 365) 381 54.8 2.9e-07
XP_016882571 (OMIM: 194551) PREDICTED: zinc finger ( 365) 381 54.8 2.9e-07
XP_011540390 (OMIM: 604084) PREDICTED: zinc finger ( 721) 386 55.8 2.9e-07
>>NP_840101 (OMIM: 612741) zinc finger protein SNAI3 [Ho (292 aa)
initn: 2086 init1: 2086 opt: 2086 Z-score: 1255.0 bits: 240.2 E(85289): 3.7e-63
Smith-Waterman score: 2086; 100.0% identity (100.0% similar) in 292 aa overlap (1-292:1-292)
10 20 30 40 50 60
pF1KB7 MPRSFLVKTHSSHRVPNYRRLETQREINGACSACGGLVVPLLPRDKEAPSVPGDLPQPWD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_840 MPRSFLVKTHSSHRVPNYRRLETQREINGACSACGGLVVPLLPRDKEAPSVPGDLPQPWD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 RSSAVACISLPLLPRIEEALGASGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPLLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_840 RSSAVACISLPLLPRIEEALGASGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPLLVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_840 PTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKPYACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_840 RVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKPYACS
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 HCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGCCPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_840 HCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGCCPGP
250 260 270 280 290
>>NP_003059 (OMIM: 172800,602150,608890) zinc finger pro (268 aa)
initn: 862 init1: 814 opt: 837 Z-score: 520.9 bits: 104.2 E(85289): 2.8e-22
Smith-Waterman score: 879; 51.4% identity (67.7% similar) in 294 aa overlap (1-289:1-265)
10 20 30 40 50
pF1KB7 MPRSFLVKTH-SSHRVPNYRRLETQREINGACSACGGLVVPLLPRDKEAPSVPGDLPQPW
:::::::: : .. . ::: .:.:. : . : : :. :.: .:::
NP_003 MPRSFLVKKHFNASKKPNYSELDTHTVI----------ISPYL---YESYSMPV-IPQPE
10 20 30 40
60 70 80 90 100 110
pF1KB7 DRSS-AVACISLPLLPRIEEALGASGLDALEVSEVDPRASRAAIVPLKD--SLNHL-NLP
:: : . :.. .: .::. : : . .:.. : .: : .: .
NP_003 ILSSGAYSPITVWTTAAPFHAQLPNGLSPL--SGYSSSLGRVSPPPPSDTSSKDHSGSES
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 PLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHC
:. : . :. : :. . ::. :.: :.: : :..:::.:.::::
NP_003 PISDEEERLQSKLS-DPHA-----IEAEK-------FQCNLCNKTYSTFSGLAKHKQLHC
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 HLQVGRVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEK
: . :.::::::::.::::::::::::::::.:::::::::::::::::.:::::::
NP_003 DAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEK
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 PYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGCCPGP
:..: ::.::::::::::::::::::.:::.:. :.::::::::: .:::::::
NP_003 PFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
220 230 240 250 260
>>NP_005976 (OMIM: 604238) zinc finger protein SNAI1 [Ho (264 aa)
initn: 746 init1: 678 opt: 687 Z-score: 432.8 bits: 87.9 E(85289): 2.3e-17
Smith-Waterman score: 713; 45.9% identity (67.2% similar) in 296 aa overlap (1-290:1-263)
10 20 30 40 50
pF1KB7 MPRSFLVKTHSS-HRVPNYRRLE-TQREINGACSACGGLVVPLLPRDKEAPSVPGDLPQ-
:::::::. :. .: ::: .:. .. :.. . .. .: : . ..::.
NP_005 MPRSFLVRKPSDPNRKPNYSELQDSNPEFTFQQPYDQAHLLAAIP-PPEILNPTASLPML
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PWDRSSAVACISLPLLPRIEEALGASGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPL
:: :..: :. . :: :...: .::... . . .:: .. . ::
NP_005 IWD--SVLA-------PQAQPIAWAS----LRLQE-SPRVAELTSLSDEDS-GKGSQPPS
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 LVLPTRWSPTLGPDRHGAPE-KLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCH
: :. .:. .. . : :: . :: . : . :: :.. ..
NP_005 ---P----PSPAPSSFSSTSVSSLEAEAYAAFPGLGQV-----P-KQLAQLSEAKD----
110 120 130 140
180 190 200 210 220 230
pF1KB7 LQVGRVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKP
::. ..:.::::.::: ::::::::::.:::::.: :::::::::::::::::::::::
NP_005 LQARKAFNCKYCNKEYLSLGALKMHIRSHTLPCVCGTCGKAFSRPWLLQGHVRTHTGEKP
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB7 YACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGC--CPGP
..: :::::::::::::::::::::.:::.:. :..:::::::: .:.:::: ::
NP_005 FSCPHCSRAFADRSNLRAHLQTHSDVKKYQCQACARTFSRMSLLHKHQESGCSGCPR
210 220 230 240 250 260
>>NP_112599 (OMIM: 605858) transcriptional repressor scr (348 aa)
initn: 743 init1: 528 opt: 581 Z-score: 369.3 bits: 76.5 E(85289): 7.9e-14
Smith-Waterman score: 581; 49.7% identity (68.7% similar) in 163 aa overlap (129-291:168-330)
100 110 120 130 140 150
pF1KB7 RAAIVPLKDSLNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCH
: : :: . .. : : : .:
NP_112 STASAAAPDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHACGECG
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB7 KPYHTLAGLARHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAF
: : : ..:.::.: : :. . : : : :.:. :. ::. :: : : .:::::
NP_112 KTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAF
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB7 SRPWLLQGHVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMS
:::::::::.:.::::::..:.::..:::::::::::.:::: :...:.:: :.:. :
NP_112 SRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKS
260 270 280 290 300 310
280 290
pF1KB7 LLARHEESGCCPGP
: .: ::.: :
NP_112 YLNKHYESACFKGGAGGPAAPAPPQLSPVQA
320 330 340
>>NP_003442 (OMIM: 601276) zinc finger protein 177 isofo (321 aa)
initn: 1029 init1: 307 opt: 404 Z-score: 265.5 bits: 57.2 E(85289): 4.7e-08
Smith-Waterman score: 404; 42.3% identity (64.2% similar) in 137 aa overlap (152-286:124-257)
130 140 150 160 170 180
pF1KB7 TRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVGR
.:: : : . ..: .: . : .
NP_003 DTIAMQNIPGGKTSNGINTNCVRTHSGEMPYECSDCGKAFIFQSSLKKHMRSHTG---EK
100 110 120 130 140 150
190 200 210 220 230
pF1KB7 VFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWLLQGHVRTHTGEKPYAC
. : .: : ... . :..: :::: : :: :::::. : :: ::::::::::: :
NP_003 PYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHTGEKPYEC
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 SHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGCCPGP
: :..:: :.:.:. : ..:. : :.: .: :.:: : : :...
NP_003 SDCGKAFIDQSSLKKHTRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECG
220 230 240 250 260 270
NP_003 KAFRNSSCLRVHVRTHTGEKPYKCIQCEKAFSTSTNLIMHKRIHNGQKLHE
280 290 300 310 320
>>NP_001166122 (OMIM: 601276) zinc finger protein 177 is (481 aa)
initn: 1005 init1: 307 opt: 407 Z-score: 265.5 bits: 57.8 E(85289): 4.7e-08
Smith-Waterman score: 407; 39.9% identity (61.4% similar) in 153 aa overlap (136-286:268-417)
110 120 130 140 150 160
pF1KB7 KDSLNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLA
: .: . : . .:: : : . .
NP_001 GKISPLSVHTKTGSVEEGLECNEHEKTFTDPLSLQNCVRTHSGEMPYECSDCGKAFIFQS
240 250 260 270 280 290
170 180 190 200 210 220
pF1KB7 GLARHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWL
.: .: . : . . : .: : ... . :..: :::: : :: :::::. :
NP_001 SLKKHMRSHTGE---KPYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSS
300 310 320 330 340 350
230 240 250 260 270 280
pF1KB7 LQGHVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARH
:: ::::::::::: :: :..:: :.:.:. : ..:. : :.: .: :.:: : : :
NP_001 LQKHVRTHTGEKPYECSDCGKAFIDQSSLKKHTRSHTGEKPYECNQCGKSFSTGSYLIVH
360 370 380 390 400 410
290
pF1KB7 EESGCCPGP
...
NP_001 KRTHTGEKTYECKECGKAFRNSSCLRVHVRTHTGEKPYKCIQCEKAFSTSTNLIMHKRIH
420 430 440 450 460 470
>>NP_001308284 (OMIM: 611024) zinc finger protein 667 is (553 aa)
initn: 1379 init1: 284 opt: 395 Z-score: 257.9 bits: 56.6 E(85289): 1.3e-07
Smith-Waterman score: 395; 38.7% identity (64.7% similar) in 150 aa overlap (139-286:401-547)
110 120 130 140 150 160
pF1KB7 LNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLA
:. .:. . ..: .: : . .:.
NP_001 ANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLT
380 390 400 410 420 430
170 180 190 200 210 220
pF1KB7 RHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWLLQG
::...: . : . : : : ... . : .: : :: : ::: ::::::. :
NP_001 RHKRIHTE---DRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLIL
440 450 460 470 480
230 240 250 260 270 280
pF1KB7 HVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEES
: :.::::::: :..:..::.. :.: : ..::. : :.: .: :..:: : : ::...
NP_001 HERSHTGEKPYECNECGKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNT
490 500 510 520 530 540
290
pF1KB7 GCCPGP
NP_001 HSEEKA
550
>>NP_071386 (OMIM: 611024) zinc finger protein 667 isofo (610 aa)
initn: 1355 init1: 284 opt: 395 Z-score: 257.4 bits: 56.7 E(85289): 1.3e-07
Smith-Waterman score: 395; 38.7% identity (64.7% similar) in 150 aa overlap (139-286:458-604)
110 120 130 140 150 160
pF1KB7 LNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLA
:. .:. . ..: .: : . .:.
NP_071 ANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLT
430 440 450 460 470 480
170 180 190 200 210 220
pF1KB7 RHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWLLQG
::...: . : . : : : ... . : .: : :: : ::: ::::::. :
NP_071 RHKRIHTE---DRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLIL
490 500 510 520 530 540
230 240 250 260 270 280
pF1KB7 HVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEES
: :.::::::: :..:..::.. :.: : ..::. : :.: .: :..:: : : ::...
NP_071 HERSHTGEKPYECNECGKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNT
550 560 570 580 590 600
290
pF1KB7 GCCPGP
NP_071 HSEEKA
610
>>XP_011525510 (OMIM: 611024) PREDICTED: zinc finger pro (610 aa)
initn: 1355 init1: 284 opt: 395 Z-score: 257.4 bits: 56.7 E(85289): 1.3e-07
Smith-Waterman score: 395; 38.7% identity (64.7% similar) in 150 aa overlap (139-286:458-604)
110 120 130 140 150 160
pF1KB7 LNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLA
:. .:. . ..: .: : . .:.
XP_011 ANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLT
430 440 450 460 470 480
170 180 190 200 210 220
pF1KB7 RHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWLLQG
::...: . : . : : : ... . : .: : :: : ::: ::::::. :
XP_011 RHKRIHTE---DRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLIL
490 500 510 520 530 540
230 240 250 260 270 280
pF1KB7 HVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEES
: :.::::::: :..:..::.. :.: : ..::. : :.: .: :..:: : : ::...
XP_011 HERSHTGEKPYECNECGKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNT
550 560 570 580 590 600
290
pF1KB7 GCCPGP
XP_011 HSEEKA
610
>>XP_011525511 (OMIM: 611024) PREDICTED: zinc finger pro (610 aa)
initn: 1355 init1: 284 opt: 395 Z-score: 257.4 bits: 56.7 E(85289): 1.3e-07
Smith-Waterman score: 395; 38.7% identity (64.7% similar) in 150 aa overlap (139-286:458-604)
110 120 130 140 150 160
pF1KB7 LNHLNLPPLLVLPTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLA
:. .:. . ..: .: : . .:.
XP_011 ANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLT
430 440 450 460 470 480
170 180 190 200 210 220
pF1KB7 RHRQLHCHLQVGRVFTCKYCDKEYTSLGALKMHIRTHT--LPCTCKICGKAFSRPWLLQG
::...: . : . : : : ... . : .: : :: : ::: ::::::. :
XP_011 RHKRIHTE---DRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLIL
490 500 510 520 530 540
230 240 250 260 270 280
pF1KB7 HVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEES
: :.::::::: :..:..::.. :.: : ..::. : :.: .: :..:: : : ::...
XP_011 HERSHTGEKPYECNECGKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNT
550 560 570 580 590 600
290
pF1KB7 GCCPGP
XP_011 HSEEKA
610
292 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:19:19 2016 done: Fri Nov 4 21:19:20 2016
Total Scan time: 7.830 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]