FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7615, 304 aa 1>>>pF1KB7615 304 - 304 aa - 304 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1496+/-0.000371; mu= 4.6594+/- 0.023 mean_var=217.5439+/-44.469, 0's: 0 Z-trim(121.5): 280 B-trim: 417 in 2/52 Lambda= 0.086956 statistics sampled from 37922 (38247) to 37922 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.448), width: 16 Scan time: 8.790 The best scores are: opt bits E(85289) NP_005915 (OMIM: 600535) homeobox protein MOX-2 [H ( 304) 2101 275.6 8.4e-74 NP_004518 (OMIM: 214300,600147) homeobox protein M ( 254) 525 77.8 2.4e-14 NP_001035091 (OMIM: 214300,600147) homeobox protei ( 139) 519 76.8 2.7e-14 XP_011523120 (OMIM: 214300,600147) PREDICTED: home ( 227) 391 61.0 2.6e-09 NP_689952 (OMIM: 142956) homeobox protein Hox-A9 [ ( 272) 335 54.0 3.8e-07 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 314 51.6 3.4e-06 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 314 51.6 3.4e-06 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 314 51.6 3.4e-06 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 314 51.6 3.4e-06 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 314 51.6 3.4e-06 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 314 51.6 3.4e-06 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 314 51.6 3.4e-06 NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 309 50.8 3.6e-06 NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 309 50.8 3.6e-06 NP_004493 (OMIM: 142962) homeobox protein Hox-B7 [ ( 217) 307 50.4 3.7e-06 NP_008828 (OMIM: 142971) homeobox protein Hox-C9 [ ( 260) 306 50.4 4.6e-06 NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 291 48.5 1.7e-05 NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 279 46.9 3.8e-05 NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 283 47.7 4.9e-05 XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 283 47.7 4.9e-05 NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 276 46.6 6.5e-05 XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 276 46.6 6.5e-05 NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 270 45.9 0.00012 NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 271 46.2 0.00013 NP_061824 (OMIM: 142957) homeobox protein Hox-A10 ( 410) 270 46.1 0.00015 NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 266 45.4 0.00015 NP_663632 (OMIM: 616542) GS homeobox 1 [Homo sapie ( 264) 266 45.4 0.00015 NP_055028 (OMIM: 142982) homeobox protein Hox-D9 [ ( 352) 267 45.6 0.00017 NP_076921 (OMIM: 142963) homeobox protein Hox-B8 [ ( 243) 262 44.8 0.0002 XP_016880053 (OMIM: 142963) PREDICTED: homeobox pr ( 243) 262 44.8 0.0002 NP_055027 (OMIM: 605559) homeobox protein Hox-C11 ( 304) 262 44.9 0.00024 NP_005184 (OMIM: 300025) homeobox protein CDX-4 [H ( 284) 260 44.6 0.00027 XP_016867454 (OMIM: 603354) PREDICTED: homeobox pr ( 203) 257 44.1 0.00027 XP_016867453 (OMIM: 603354) PREDICTED: homeobox pr ( 204) 257 44.1 0.00027 NP_005514 (OMIM: 142958,605432) homeobox protein H ( 313) 257 44.3 0.00037 NP_067015 (OMIM: 142986) homeobox protein Hox-D11 ( 338) 257 44.3 0.00039 NP_000200 (OMIM: 125853,260370,600733,606176,60639 ( 283) 255 44.0 0.00041 NP_001092304 (OMIM: 603354) homeobox protein GBX-1 ( 363) 257 44.4 0.00041 NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 256 44.2 0.00042 XP_005257343 (OMIM: 142963) PREDICTED: homeobox pr ( 242) 252 43.6 0.00048 XP_011523023 (OMIM: 142966) PREDICTED: homeobox pr ( 430) 256 44.3 0.00051 NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 253 43.9 0.00058 XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 253 43.9 0.00058 NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 254 44.0 0.00058 >>NP_005915 (OMIM: 600535) homeobox protein MOX-2 [Homo (304 aa) initn: 2101 init1: 2101 opt: 2101 Z-score: 1446.0 bits: 275.6 E(85289): 8.4e-74 Smith-Waterman score: 2101; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304) 10 20 30 40 50 60 pF1KB7 MEHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MEHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 ASQHHRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 ASQHHRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 GSSPPVLCSNSSSLGSSTPTGAACAPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 GSSPPVLCSNSSSLGSSTPTGAACAPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 SEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 KWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDHSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 KWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDHSSE 250 260 270 280 290 300 pF1KB7 HAHL :::: NP_005 HAHL >>NP_004518 (OMIM: 214300,600147) homeobox protein MOX-1 (254 aa) initn: 629 init1: 487 opt: 525 Z-score: 378.4 bits: 77.8 E(85289): 2.4e-14 Smith-Waterman score: 624; 47.8% identity (64.3% similar) in 255 aa overlap (4-249:17-233) 10 20 30 pF1KB7 MEHPLFGCLRSPHAT---AQGLHPFSQSSLALHGRSDHMS-----YP :..::::.::. :.:: . . ...: . : .. :: NP_004 MDPAASSCMRSLQPPAPVWGCLRNPHSEGNGASGLPHYPPTPFSFHQKPDFLATATAAYP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB7 ELSTSSSSCIIAGYPNEEGMFASQHHRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSS ..:.: . . :.:: .:. :: :. :::.: NP_004 DFSASCLAATPHSLPQEEHIFTEQHPA-------------FPQSP------NWHFPV--- 70 80 90 100 110 120 130 140 150 pF1KB7 PPSAARHSLCLQPDSGGPPELGSSPPVLCSNSSSLGSSTPTGAACAPGD-YGRQALSPAE : ::. .:.:: : ::. ..:::: ::. ::: :: . . : NP_004 --SDARR----RPNSG--PAGGSKE----MGTSSLGLVDTTGG---PGDDYGVLGSTANE 100 110 120 130 140 160 170 180 190 200 210 pF1KB7 AEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRY .::.:. .:: .:::.::. : : .:: :::::::::::.::::::::::::::::::: NP_004 TEKKSSRRRK-ESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRY 150 160 170 180 190 200 220 230 240 250 260 270 pF1KB7 EIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAA ::::::::.:::::::::::::::::::::: NP_004 EIAVNLDLSERQVKVWFQNRRMKWKRVKGGQPISPNGQDPEDGDSTASPSSE 210 220 230 240 250 280 290 300 pF1KB7 TLQQTGDSIANEDSHDSDHSSEHAHL >>NP_001035091 (OMIM: 214300,600147) homeobox protein MO (139 aa) initn: 520 init1: 487 opt: 519 Z-score: 377.7 bits: 76.8 E(85289): 2.7e-14 Smith-Waterman score: 519; 70.8% identity (84.2% similar) in 120 aa overlap (131-249:3-118) 110 120 130 140 150 pF1KB7 PSAARHSLCLQPDSGGPPELGSSPPVLCSNSSSLGSSTPTGAACAPGD-YGRQALSPAEA .:::: :: .::: :: . . :. NP_001 MGTSSLGLVDTTG---GPGDDYGVLGSTANET 10 20 160 170 180 190 200 210 pF1KB7 EKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYE ::.:. .:...:::.::. : : .:: :::::::::::.:::::::::::::::::::: NP_001 EKKSS-RRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYE 30 40 50 60 70 80 220 230 240 250 260 270 pF1KB7 IAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAAT :::::::.:::::::::::::::::::::: NP_001 IAVNLDLSERQVKVWFQNRRMKWKRVKGGQPISPNGQDPEDGDSTASPSSE 90 100 110 120 130 >>XP_011523120 (OMIM: 214300,600147) PREDICTED: homeobox (227 aa) initn: 561 init1: 353 opt: 391 Z-score: 288.2 bits: 61.0 E(85289): 2.6e-09 Smith-Waterman score: 490; 42.9% identity (62.2% similar) in 238 aa overlap (4-232:17-216) 10 20 30 pF1KB7 MEHPLFGCLRSPHAT---AQGLHPFSQSSLALHGRSDHMS-----YP :..::::.::. :.:: . . ...: . : .. :: XP_011 MDPAASSCMRSLQPPAPVWGCLRNPHSEGNGASGLPHYPPTPFSFHQKPDFLATATAAYP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB7 ELSTSSSSCIIAGYPNEEGMFASQHHRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSS ..:.: . . :.:: .:. :: . . :::.: XP_011 DFSASCLAATPHSLPQEEHIFTEQHPAFPQ-------------------SPNWHFPV--- 70 80 90 100 110 120 130 140 150 pF1KB7 PPSAARHSLCLQPDSGGPPELGSSPPVLCSNSSSLGSSTPTGAACAPGD-YGRQALSPAE : ::. .:.:: : ::. ..:::: ::. ::: :: . . : XP_011 --SDARR----RPNSG--PAGGSKE----MGTSSLGLVDTTGG---PGDDYGVLGSTANE 100 110 120 130 140 160 170 180 190 200 210 pF1KB7 AEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRY .::.:. .:...:::.::. : : .:: :::::::::::.::::::::::::::::::: XP_011 TEKKSS-RRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRY 150 160 170 180 190 200 220 230 240 250 260 270 pF1KB7 EIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAA ::::::::.::::. XP_011 EIAVNLDLSERQVRPRSKCGSRTEG 210 220 >>NP_689952 (OMIM: 142956) homeobox protein Hox-A9 [Homo (272 aa) initn: 550 init1: 242 opt: 335 Z-score: 249.2 bits: 54.0 E(85289): 3.8e-07 Smith-Waterman score: 335; 33.2% identity (55.6% similar) in 241 aa overlap (18-245:36-264) 10 20 30 40 pF1KB7 MEHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSS : : . ..:: .: .. : .:.. NP_689 ALGNYYVDSFLLGADAADELSVGRYAPGTLGQPPRQAATLA-----EHPDFSPCSFQSKA 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB7 CIIAGYPNEEGMFASQHHRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHS .... : ... . .:::::: . : : : . . . :. . : NP_689 TVFGASWNPVHAAGANAVPAAVYHHHHHHPYVHPQAPVAAAAPDGRYMRSWLEPTPGALS 70 80 90 100 110 120 110 120 130 140 150 pF1KB7 LCLQPDS---GGPPELGSSP----PVLCSNSSSLGSSTPTGAACA--PGDYGRQ----AL . :.: : :: :. :.: ... :: : ::. : : .: :. NP_689 FAGLPSSRPYGIKPEPLSARRGDCPTLDTHTLSL-----TDYACGSPPVDREKQPSEGAF 130 140 150 160 170 160 170 180 190 200 210 pF1KB7 SPAEAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTR : .::..::: . . .. .:. .. ::.: .::.: ::: :: . :::: NP_689 SENNAENESGGDKPPIDPNNPAANWLHARST--RKKRCPYTKHQTLELEKEFLFNMYLTR 180 190 200 210 220 230 220 230 240 250 260 270 pF1KB7 LRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSG ::::.: :.:::::::.:::::::: :.. NP_689 DRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAKDE 240 250 260 270 280 290 300 pF1KB7 IGAATLQQTGDSIANEDSHDSDHSSEHAHL >>XP_005249788 (OMIM: 142954) PREDICTED: homeobox protei (443 aa) initn: 316 init1: 224 opt: 314 Z-score: 232.3 bits: 51.6 E(85289): 3.4e-06 Smith-Waterman score: 314; 38.3% identity (63.0% similar) in 162 aa overlap (95-249:99-253) 70 80 90 100 110 120 pF1KB7 HRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSP : .::. : . : .. :: ..:: XP_005 EACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTP-AAPPPPSSASP 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 PVLCSNSSSLGSSTPTGAACAP----GDYGRQALSPAEAEKRSGGKRKSDSSDSQE---G : ::. ::..:: .: ..: . : :.:.. :.:..::.: : : XP_005 PQNASNNP-----TPANAAKSPLLNSPTVAKQIF-PWMKESRQNTKQKTSSSSSGESCAG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN . . ... .. :::.:. :. ::: :: . :: : :: :.: :.:::::.:.:::: XP_005 DKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 RRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDH ::::.:. . :. XP_005 RRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPP 250 260 270 280 290 300 >>XP_006715778 (OMIM: 142954) PREDICTED: homeobox protei (443 aa) initn: 316 init1: 224 opt: 314 Z-score: 232.3 bits: 51.6 E(85289): 3.4e-06 Smith-Waterman score: 314; 38.3% identity (63.0% similar) in 162 aa overlap (95-249:99-253) 70 80 90 100 110 120 pF1KB7 HRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSP : .::. : . : .. :: ..:: XP_006 EACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTP-AAPPPPSSASP 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 PVLCSNSSSLGSSTPTGAACAP----GDYGRQALSPAEAEKRSGGKRKSDSSDSQE---G : ::. ::..:: .: ..: . : :.:.. :.:..::.: : : XP_006 PQNASNNP-----TPANAAKSPLLNSPTVAKQIF-PWMKESRQNTKQKTSSSSSGESCAG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN . . ... .. :::.:. :. ::: :: . :: : :: :.: :.:::::.:.:::: XP_006 DKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 RRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDH ::::.:. . :. XP_006 RRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPP 250 260 270 280 290 300 >>XP_005249789 (OMIM: 142954) PREDICTED: homeobox protei (443 aa) initn: 316 init1: 224 opt: 314 Z-score: 232.3 bits: 51.6 E(85289): 3.4e-06 Smith-Waterman score: 314; 38.3% identity (63.0% similar) in 162 aa overlap (95-249:99-253) 70 80 90 100 110 120 pF1KB7 HRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSP : .::. : . : .. :: ..:: XP_005 EACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTP-AAPPPPSSASP 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 PVLCSNSSSLGSSTPTGAACAP----GDYGRQALSPAEAEKRSGGKRKSDSSDSQE---G : ::. ::..:: .: ..: . : :.:.. :.:..::.: : : XP_005 PQNASNNP-----TPANAAKSPLLNSPTVAKQIF-PWMKESRQNTKQKTSSSSSGESCAG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN . . ... .. :::.:. :. ::: :: . :: : :: :.: :.:::::.:.:::: XP_005 DKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 RRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDH ::::.:. . :. XP_005 RRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPP 250 260 270 280 290 300 >>NP_705895 (OMIM: 142954) homeobox protein Hox-A3 isofo (443 aa) initn: 316 init1: 224 opt: 314 Z-score: 232.3 bits: 51.6 E(85289): 3.4e-06 Smith-Waterman score: 314; 38.3% identity (63.0% similar) in 162 aa overlap (95-249:99-253) 70 80 90 100 110 120 pF1KB7 HRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSP : .::. : . : .. :: ..:: NP_705 EACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTP-AAPPPPSSASP 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 PVLCSNSSSLGSSTPTGAACAP----GDYGRQALSPAEAEKRSGGKRKSDSSDSQE---G : ::. ::..:: .: ..: . : :.:.. :.:..::.: : : NP_705 PQNASNNP-----TPANAAKSPLLNSPTVAKQIF-PWMKESRQNTKQKTSSSSSGESCAG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN . . ... .. :::.:. :. ::: :: . :: : :: :.: :.:::::.:.:::: NP_705 DKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 RRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDH ::::.:. . :. NP_705 RRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPP 250 260 270 280 290 300 >>XP_011513645 (OMIM: 142954) PREDICTED: homeobox protei (443 aa) initn: 316 init1: 224 opt: 314 Z-score: 232.3 bits: 51.6 E(85289): 3.4e-06 Smith-Waterman score: 314; 38.3% identity (63.0% similar) in 162 aa overlap (95-249:99-253) 70 80 90 100 110 120 pF1KB7 HRGHHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSP : .::. : . : .. :: ..:: XP_011 EACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTP-AAPPPPSSASP 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 PVLCSNSSSLGSSTPTGAACAP----GDYGRQALSPAEAEKRSGGKRKSDSSDSQE---G : ::. ::..:: .: ..: . : :.:.. :.:..::.: : : XP_011 PQNASNNP-----TPANAAKSPLLNSPTVAKQIF-PWMKESRQNTKQKTSSSSSGESCAG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN . . ... .. :::.:. :. ::: :: . :: : :: :.: :.:::::.:.:::: XP_011 DKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 RRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSIANEDSHDSDH ::::.:. . :. XP_011 RRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPP 250 260 270 280 290 300 304 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 21:19:57 2016 done: Fri Nov 4 21:19:58 2016 Total Scan time: 8.790 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]