Result of FASTA (omim) for
pF1KB7636
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7636, 377 aa
1>>>pF1KB7636 377 - 377 aa - 377 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1595+/-0.000371; mu= 16.8656+/- 0.023
mean_var=58.2981+/-12.329, 0's: 0 Z-trim(111.9): 108 B-trim: 898 in 1/56
Lambda= 0.167976
statistics sampled from 20565 (20675) to 20565 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.242), width: 16
Scan time: 6.740
The best scores are: opt bits E(85289)
NP_060956 (OMIM: 300269) histone deacetylase 8 iso ( 377) 2575 632.5 4.8e-181
XP_011529288 (OMIM: 300269) PREDICTED: histone dea ( 441) 2529 621.4 1.2e-177
XP_011529289 (OMIM: 300269) PREDICTED: histone dea ( 379) 2280 561.0 1.6e-159
NP_001159891 (OMIM: 300269) histone deacetylase 8 ( 256) 1674 414.1 1.8e-115
XP_016885135 (OMIM: 300269) PREDICTED: histone dea ( 274) 1666 412.2 7.4e-115
NP_001159890 (OMIM: 300269) histone deacetylase 8 ( 286) 1586 392.8 5.3e-109
XP_016885131 (OMIM: 300269) PREDICTED: histone dea ( 350) 1540 381.7 1.4e-105
XP_016885136 (OMIM: 300269) PREDICTED: histone dea ( 268) 1264 314.7 1.5e-85
XP_016885130 (OMIM: 300269) PREDICTED: histone dea ( 389) 1264 314.8 2.1e-85
XP_016885129 (OMIM: 300269) PREDICTED: histone dea ( 415) 1264 314.8 2.3e-85
XP_016885133 (OMIM: 300269) PREDICTED: histone dea ( 324) 1104 276.0 8.6e-74
XP_011534090 (OMIM: 605164) PREDICTED: histone dea ( 458) 1089 272.4 1.4e-72
XP_016866288 (OMIM: 605164) PREDICTED: histone dea ( 458) 1089 272.4 1.4e-72
NP_001518 (OMIM: 605164) histone deacetylase 2 [Ho ( 488) 1089 272.4 1.5e-72
NP_004955 (OMIM: 601241) histone deacetylase 1 [Ho ( 482) 1083 271.0 4.1e-72
NP_003874 (OMIM: 605166) histone deacetylase 3 [Ho ( 428) 1048 262.5 1.3e-69
NP_001159894 (OMIM: 300269) histone deacetylase 8 ( 158) 1001 250.9 1.5e-66
NP_001159892 (OMIM: 300269) histone deacetylase 8 ( 146) 999 250.4 2e-66
XP_016885134 (OMIM: 300269) PREDICTED: histone dea ( 315) 993 249.1 1e-65
XP_016885132 (OMIM: 300269) PREDICTED: histone dea ( 341) 993 249.1 1.1e-65
XP_011539611 (OMIM: 601241) PREDICTED: histone dea ( 289) 576 148.0 2.6e-35
XP_011535999 (OMIM: 605166) PREDICTED: histone dea ( 241) 521 134.7 2.2e-31
NP_001308157 (OMIM: 300272,300863) histone deacety (1215) 400 105.6 6.1e-22
NP_001308156 (OMIM: 300272,300863) histone deacety (1215) 400 105.6 6.1e-22
NP_001308155 (OMIM: 300272,300863) histone deacety (1215) 400 105.6 6.1e-22
NP_006035 (OMIM: 300272,300863) histone deacetylas (1215) 400 105.6 6.1e-22
NP_001308158 (OMIM: 300272,300863) histone deacety (1215) 400 105.6 6.1e-22
NP_001308154 (OMIM: 300272,300863) histone deacety (1229) 400 105.7 6.2e-22
NP_001159920 (OMIM: 300269) histone deacetylase 8 ( 139) 364 96.5 4e-20
XP_016884676 (OMIM: 300272,300863) PREDICTED: hist ( 622) 364 96.8 1.5e-19
NP_478056 (OMIM: 606543) histone deacetylase 9 iso (1011) 360 95.9 4.3e-19
NP_001308826 (OMIM: 606543) histone deacetylase 9 (1025) 360 95.9 4.4e-19
XP_016868317 (OMIM: 606543) PREDICTED: histone dea (1025) 360 95.9 4.4e-19
NP_001308806 (OMIM: 606543) histone deacetylase 9 (1025) 360 95.9 4.4e-19
XP_011513948 (OMIM: 606543) PREDICTED: histone dea (1035) 360 95.9 4.4e-19
XP_011513947 (OMIM: 606543) PREDICTED: histone dea (1038) 360 95.9 4.4e-19
XP_011513946 (OMIM: 606543) PREDICTED: histone dea (1038) 360 95.9 4.4e-19
XP_011513944 (OMIM: 606543) PREDICTED: histone dea (1043) 360 95.9 4.5e-19
XP_016868316 (OMIM: 606543) PREDICTED: histone dea (1043) 360 95.9 4.5e-19
XP_011513943 (OMIM: 606543) PREDICTED: histone dea (1043) 360 95.9 4.5e-19
XP_011513936 (OMIM: 606543) PREDICTED: histone dea (1044) 360 95.9 4.5e-19
NP_001308797 (OMIM: 606543) histone deacetylase 9 (1044) 360 95.9 4.5e-19
XP_016868315 (OMIM: 606543) PREDICTED: histone dea (1066) 360 95.9 4.5e-19
NP_848510 (OMIM: 606543) histone deacetylase 9 iso (1066) 360 95.9 4.5e-19
XP_011513940 (OMIM: 606543) PREDICTED: histone dea (1069) 360 95.9 4.5e-19
NP_848512 (OMIM: 606543) histone deacetylase 9 iso (1069) 360 95.9 4.5e-19
XP_011513941 (OMIM: 606543) PREDICTED: histone dea (1069) 360 95.9 4.5e-19
XP_011513938 (OMIM: 606543) PREDICTED: histone dea (1071) 360 95.9 4.6e-19
XP_011513939 (OMIM: 606543) PREDICTED: histone dea (1071) 360 95.9 4.6e-19
XP_011513950 (OMIM: 606543) PREDICTED: histone dea (1074) 360 95.9 4.6e-19
>>NP_060956 (OMIM: 300269) histone deacetylase 8 isoform (377 aa)
initn: 2575 init1: 2575 opt: 2575 Z-score: 3371.4 bits: 632.5 E(85289): 4.8e-181
Smith-Waterman score: 2575; 100.0% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPH
310 320 330 340 350 360
370
pF1KB7 RIQQILNYIKGNLKHVV
:::::::::::::::::
NP_060 RIQQILNYIKGNLKHVV
370
>>XP_011529288 (OMIM: 300269) PREDICTED: histone deacety (441 aa)
initn: 2553 init1: 2529 opt: 2529 Z-score: 3310.1 bits: 621.4 E(85289): 1.2e-177
Smith-Waterman score: 2529; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:39-408)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_011 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
310 320 330 340 350 360
340 350 360 370
pF1KB7 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
::::::::::::::::::::::::::::::::::::::::
XP_011 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKEKWPVGFGAQCFYLGKCGKA
370 380 390 400 410 420
XP_011 KTTEGQRNLKHVV
430 440
>>XP_011529289 (OMIM: 300269) PREDICTED: histone deacety (379 aa)
initn: 2280 init1: 2280 opt: 2280 Z-score: 2985.0 bits: 561.0 E(85289): 1.6e-159
Smith-Waterman score: 2280; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:39-373)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_011 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
310 320 330 340 350 360
340 350 360 370
pF1KB7 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
:::::
XP_011 IPDHENMPVNT
370
>>NP_001159891 (OMIM: 300269) histone deacetylase 8 isof (256 aa)
initn: 1674 init1: 1674 opt: 1674 Z-score: 2193.9 bits: 414.1 E(85289): 1.8e-115
Smith-Waterman score: 1674; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLI
:::::
NP_001 YQICERYEPPAPNPGL
250
>>XP_016885135 (OMIM: 300269) PREDICTED: histone deacety (274 aa)
initn: 1690 init1: 1666 opt: 1666 Z-score: 2183.0 bits: 412.2 E(85289): 7.4e-115
Smith-Waterman score: 1666; 100.0% identity (100.0% similar) in 241 aa overlap (130-370:1-241)
100 110 120 130 140 150
pF1KB7 YDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAV
::::::::::::::::::::::::::::::
XP_016 MCKVAINWSGGWHHAKKDEASGFCYLNDAV
10 20 30
160 170 180 190 200 210
pF1KB7 LGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGL
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 GKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNM
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB7 TPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTA
160 170 180 190 200 210
340 350 360 370
pF1KB7 YGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
:::::::::::::::::::::::::::::::
XP_016 YGPDYVLEITPSCRPDRNEPHRIQQILNYIKEKWPVGFGAQCFYLGKCGKAKTTEGQRNL
220 230 240 250 260 270
XP_016 KHVV
>>NP_001159890 (OMIM: 300269) histone deacetylase 8 isof (286 aa)
initn: 1586 init1: 1586 opt: 1586 Z-score: 2077.9 bits: 392.8 E(85289): 5.3e-109
Smith-Waterman score: 1748; 75.9% identity (75.9% similar) in 377 aa overlap (1-377:1-286)
10 20 30 40 50 60
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMR-----
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI
NP_001 ------------------------------------------------------------
130 140 150 160 170 180
pF1KB7 TAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
::::::::::::::::::::::::::::::::::
NP_001 --------------------------DEASGFCYLNDAVLGILRLRRKFERILYVDLDLH
60 70 80
190 200 210 220 230 240
pF1KB7 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB7 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLI
150 160 170 180 190 200
310 320 330 340 350 360
pF1KB7 LGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPH
210 220 230 240 250 260
370
pF1KB7 RIQQILNYIKGNLKHVV
:::::::::::::::::
NP_001 RIQQILNYIKGNLKHVV
270 280
>>XP_016885131 (OMIM: 300269) PREDICTED: histone deacety (350 aa)
initn: 1564 init1: 1540 opt: 1540 Z-score: 2016.3 bits: 381.7 E(85289): 1.4e-105
Smith-Waterman score: 1702; 75.4% identity (75.4% similar) in 370 aa overlap (1-370:39-317)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_016 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
:::::::::::::::::::::::::
XP_016 LAKIPKRASMVHSLIEAYALHKQMR-----------------------------------
70 80 90
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::
XP_016 --------------------------------------------------------DEAS
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
220 230 240 250 260 270
340 350 360 370
pF1KB7 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
::::::::::::::::::::::::::::::::::::::::
XP_016 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKEKWPVGFGAQCFYLGKCGKA
280 290 300 310 320 330
XP_016 KTTEGQRNLKHVV
340 350
>>XP_016885136 (OMIM: 300269) PREDICTED: histone deacety (268 aa)
initn: 1264 init1: 1264 opt: 1264 Z-score: 1656.6 bits: 314.7 E(85289): 1.5e-85
Smith-Waterman score: 1438; 89.4% identity (89.4% similar) in 245 aa overlap (1-245:39-257)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_016 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::
XP_016 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG--------------------------
190 200 210 220
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
:::::::::::::::::::::::::::::::::::
XP_016 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICERYEPPAPNPGL
230 240 250 260
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
>>XP_016885130 (OMIM: 300269) PREDICTED: histone deacety (389 aa)
initn: 1264 init1: 1264 opt: 1264 Z-score: 1654.1 bits: 314.8 E(85289): 2.1e-85
Smith-Waterman score: 2339; 93.1% identity (93.1% similar) in 377 aa overlap (1-377:39-389)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_016 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::
XP_016 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG--------------------------
190 200 210 220
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
290 300 310 320 330 340
340 350 360 370
pF1KB7 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
350 360 370 380
>>XP_016885129 (OMIM: 300269) PREDICTED: histone deacety (415 aa)
initn: 1264 init1: 1264 opt: 1264 Z-score: 1653.7 bits: 314.8 E(85289): 2.3e-85
Smith-Waterman score: 2293; 93.0% identity (93.0% similar) in 370 aa overlap (1-370:39-382)
10 20 30
pF1KB7 MEEPEEPADSGQSLVPVYIYSPEYVSMCDS
::::::::::::::::::::::::::::::
XP_016 GRSEEQELEPWPSPKKARSGRWLRNGFKRKMEEPEEPADSGQSLVPVYIYSPEYVSMCDS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEAS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPG
::::::::::::::::::::::::::::::::::
XP_016 GFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG--------------------------
190 200 210 220
220 230 240 250 260 270
pF1KB7 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIA
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSE
290 300 310 320 330 340
340 350 360 370
pF1KB7 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
::::::::::::::::::::::::::::::::::::::::
XP_016 IPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKEKWPVGFGAQCFYLGKCGKA
350 360 370 380 390 400
XP_016 KTTEGQRNLKHVV
410
377 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:31:01 2016 done: Fri Nov 4 12:31:03 2016
Total Scan time: 6.740 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]