Result of FASTA (omim) for
pF1KB7641
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7641, 326 aa
1>>>pF1KB7641 326 - 326 aa - 326 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2575+/-0.000385; mu= -9.2622+/- 0.024
mean_var=581.9231+/-140.064, 0's: 0 Z-trim(124.8): 359 B-trim: 2582 in 1/56
Lambda= 0.053167
statistics sampled from 46234 (47114) to 46234 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.837), E-opt: 0.2 (0.552), width: 16
Scan time: 8.360
The best scores are: opt bits E(85289)
NP_001240721 (OMIM: 607874) zinc finger protein 44 ( 326) 2369 195.8 1e-49
XP_005259091 (OMIM: 607874) PREDICTED: zinc finger ( 327) 2357 194.9 2e-49
NP_060807 (OMIM: 607874) zinc finger protein 444 i ( 327) 2357 194.9 2e-49
XP_005259092 (OMIM: 607874) PREDICTED: zinc finger ( 327) 2357 194.9 2e-49
XP_005259093 (OMIM: 607874) PREDICTED: zinc finger ( 327) 2357 194.9 2e-49
XP_011525370 (OMIM: 607874) PREDICTED: zinc finger ( 327) 2357 194.9 2e-49
XP_011525371 (OMIM: 607874) PREDICTED: zinc finger ( 248) 1681 142.9 6.7e-34
XP_016882422 (OMIM: 607874) PREDICTED: zinc finger ( 248) 1681 142.9 6.7e-34
XP_016882421 (OMIM: 607874) PREDICTED: zinc finger ( 248) 1681 142.9 6.7e-34
XP_011525375 (OMIM: 607874) PREDICTED: zinc finger ( 195) 1468 126.4 4.8e-29
XP_011525372 (OMIM: 607874) PREDICTED: zinc finger ( 196) 1456 125.5 9.1e-29
XP_011525373 (OMIM: 607874) PREDICTED: zinc finger ( 196) 1456 125.5 9.1e-29
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 531 54.9 3e-07
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 531 54.9 3e-07
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 527 54.6 4e-07
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 527 54.6 4e-07
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 527 54.6 4e-07
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 527 54.6 4e-07
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 527 54.6 4e-07
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 527 54.6 4e-07
NP_001128650 (OMIM: 609601) zinc finger protein 39 ( 534) 519 54.2 7.2e-07
XP_016881531 (OMIM: 609601) PREDICTED: zinc finger ( 534) 519 54.2 7.2e-07
XP_011524533 (OMIM: 609601) PREDICTED: zinc finger ( 534) 519 54.2 7.2e-07
XP_016867413 (OMIM: 611272) PREDICTED: zinc finger ( 766) 520 54.5 8.5e-07
XP_016867412 (OMIM: 611272) PREDICTED: zinc finger ( 766) 520 54.5 8.5e-07
NP_001305012 (OMIM: 611272) zinc finger protein wi ( 766) 520 54.5 8.5e-07
XP_011522308 (OMIM: 616463) PREDICTED: zinc finger ( 396) 509 53.3 1e-06
NP_001307883 (OMIM: 616463) zinc finger protein 23 ( 417) 509 53.3 1.1e-06
NP_001307882 (OMIM: 616463) zinc finger protein 23 ( 417) 509 53.3 1.1e-06
NP_055334 (OMIM: 616463) zinc finger protein 232 i ( 444) 509 53.3 1.1e-06
XP_016880510 (OMIM: 616463) PREDICTED: zinc finger ( 444) 509 53.3 1.1e-06
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 509 53.4 1.1e-06
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 509 53.4 1.1e-06
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 509 53.4 1.1e-06
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 509 53.4 1.1e-06
XP_016881176 (OMIM: 609600) PREDICTED: zinc finger ( 335) 483 51.2 3.7e-06
NP_001309215 (OMIM: 609600) zinc finger protein 39 ( 335) 483 51.2 3.7e-06
NP_001309219 (OMIM: 609600) zinc finger protein 39 ( 335) 483 51.2 3.7e-06
XP_016881177 (OMIM: 609600) PREDICTED: zinc finger ( 335) 483 51.2 3.7e-06
XP_006722495 (OMIM: 609600) PREDICTED: zinc finger ( 335) 483 51.2 3.7e-06
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 487 51.8 4.1e-06
XP_016867017 (OMIM: 603978) PREDICTED: zinc finger ( 611) 487 51.8 4.3e-06
>>NP_001240721 (OMIM: 607874) zinc finger protein 444 is (326 aa)
initn: 2369 init1: 2369 opt: 2369 Z-score: 1013.5 bits: 195.8 E(85289): 1e-49
Smith-Waterman score: 2369; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PGATGGKEDSGMIPLGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGATGGKEDSGMIPLGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 PLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHG
250 260 270 280 290 300
310 320
pF1KB7 RAAASAQGAVAPGPDGGGPFPPWPLG
::::::::::::::::::::::::::
NP_001 RAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>XP_005259091 (OMIM: 607874) PREDICTED: zinc finger pro (327 aa)
initn: 2355 init1: 1441 opt: 2357 Z-score: 1008.5 bits: 194.9 E(85289): 2e-49
Smith-Waterman score: 2357; 99.7% identity (99.7% similar) in 327 aa overlap (1-326:1-327)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 PGATGGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
250 260 270 280 290 300
300 310 320
pF1KB7 GRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::
XP_005 GRAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>NP_060807 (OMIM: 607874) zinc finger protein 444 isofo (327 aa)
initn: 2355 init1: 1441 opt: 2357 Z-score: 1008.5 bits: 194.9 E(85289): 2e-49
Smith-Waterman score: 2357; 99.7% identity (99.7% similar) in 327 aa overlap (1-326:1-327)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 PGATGGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
NP_060 PGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
250 260 270 280 290 300
300 310 320
pF1KB7 GRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::
NP_060 GRAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>XP_005259092 (OMIM: 607874) PREDICTED: zinc finger pro (327 aa)
initn: 2355 init1: 1441 opt: 2357 Z-score: 1008.5 bits: 194.9 E(85289): 2e-49
Smith-Waterman score: 2357; 99.7% identity (99.7% similar) in 327 aa overlap (1-326:1-327)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 PGATGGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
250 260 270 280 290 300
300 310 320
pF1KB7 GRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::
XP_005 GRAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>XP_005259093 (OMIM: 607874) PREDICTED: zinc finger pro (327 aa)
initn: 2355 init1: 1441 opt: 2357 Z-score: 1008.5 bits: 194.9 E(85289): 2e-49
Smith-Waterman score: 2357; 99.7% identity (99.7% similar) in 327 aa overlap (1-326:1-327)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 PGATGGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
250 260 270 280 290 300
300 310 320
pF1KB7 GRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::
XP_005 GRAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>XP_011525370 (OMIM: 607874) PREDICTED: zinc finger pro (327 aa)
initn: 2355 init1: 1441 opt: 2357 Z-score: 1008.5 bits: 194.9 E(85289): 2e-49
Smith-Waterman score: 2357; 99.7% identity (99.7% similar) in 327 aa overlap (1-326:1-327)
10 20 30 40 50 60
pF1KB7 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEVAVPVKQEAEGLALDSPWHRFRRFHLGDAPGPREALGLLRALCRDWLRPEVHTKEQML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELLVLEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 PGATGGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH
250 260 270 280 290 300
300 310 320
pF1KB7 GRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::
XP_011 GRAAASAQGAVAPGPDGGGPFPPWPLG
310 320
>>XP_011525371 (OMIM: 607874) PREDICTED: zinc finger pro (248 aa)
initn: 1679 init1: 1441 opt: 1681 Z-score: 729.6 bits: 142.9 E(85289): 6.7e-34
Smith-Waterman score: 1681; 97.9% identity (98.7% similar) in 233 aa overlap (95-326:16-248)
70 80 90 100 110 120
pF1KB7 LEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQGPGAT
:.. :::::::::::::::::::::::::
XP_011 MLEGVSPHIPNKQSTLQQTQGPAASPDGSSATRVPQDVTQGPGAT
10 20 30 40
130 140 150 160 170 180
pF1KB7 GGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
170 180 190 200 210 220
310 320
pF1KB7 ASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::
XP_011 ASAQGAVAPGPDGGGPFPPWPLG
230 240
>>XP_016882422 (OMIM: 607874) PREDICTED: zinc finger pro (248 aa)
initn: 1679 init1: 1441 opt: 1681 Z-score: 729.6 bits: 142.9 E(85289): 6.7e-34
Smith-Waterman score: 1681; 97.9% identity (98.7% similar) in 233 aa overlap (95-326:16-248)
70 80 90 100 110 120
pF1KB7 LEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQGPGAT
:.. :::::::::::::::::::::::::
XP_016 MLEGVSPHIPNKQSTLQQTQGPAASPDGSSATRVPQDVTQGPGAT
10 20 30 40
130 140 150 160 170 180
pF1KB7 GGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
170 180 190 200 210 220
310 320
pF1KB7 ASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::
XP_016 ASAQGAVAPGPDGGGPFPPWPLG
230 240
>>XP_016882421 (OMIM: 607874) PREDICTED: zinc finger pro (248 aa)
initn: 1679 init1: 1441 opt: 1681 Z-score: 729.6 bits: 142.9 E(85289): 6.7e-34
Smith-Waterman score: 1681; 97.9% identity (98.7% similar) in 233 aa overlap (95-326:16-248)
70 80 90 100 110 120
pF1KB7 LEQFLSALPADTQAWVCSRQPQSGEEAVALLEELWGPAASPDGSSATRVPQDVTQGPGAT
:.. :::::::::::::::::::::::::
XP_016 MLEGVSPHIPNKQSTLQQTQGPAASPDGSSATRVPQDVTQGPGAT
10 20 30 40
130 140 150 160 170 180
pF1KB7 GGKEDSGMIPL-GTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPAFLAAPGTTSCPEC
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPALRPLP
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRAA
170 180 190 200 210 220
310 320
pF1KB7 ASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::
XP_016 ASAQGAVAPGPDGGGPFPPWPLG
230 240
>>XP_011525375 (OMIM: 607874) PREDICTED: zinc finger pro (195 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 642.4 bits: 126.4 E(85289): 4.8e-29
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 195 aa overlap (132-326:1-195)
110 120 130 140 150 160
pF1KB7 AASPDGSSATRVPQDVTQGPGATGGKEDSGMIPLGTAPGAEGPAPGDSQAVRPYKQEPSS
::::::::::::::::::::::::::::::
XP_011 MIPLGTAPGAEGPAPGDSQAVRPYKQEPSS
10 20 30
170 180 190 200 210 220
pF1KB7 PPLAPGLPAFLAAPGTTSCPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPLAPGLPAFLAAPGTTSCPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 RRHRDTHPGSPGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRHRDTHPGSPGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWE
100 110 120 130 140 150
290 300 310 320
pF1KB7 CGKGFGRREHVLRHQRIHGRAAASAQGAVAPGPDGGGPFPPWPLG
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 CGKGFGRREHVLRHQRIHGRAAASAQGAVAPGPDGGGPFPPWPLG
160 170 180 190
326 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:02:29 2016 done: Sat Nov 5 10:02:30 2016
Total Scan time: 8.360 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]