Result of FASTA (omim) for
pF1KB7666
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7666, 371 aa
1>>>pF1KB7666 371 - 371 aa - 371 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5977+/-0.000371; mu= -1.6759+/- 0.023
mean_var=305.0862+/-63.183, 0's: 0 Z-trim(122.5): 146 B-trim: 494 in 2/59
Lambda= 0.073428
statistics sampled from 40584 (40736) to 40584 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.478), width: 16
Scan time: 8.210
The best scores are: opt bits E(85289)
NP_001124185 (OMIM: 153245) lymphoid enhancer-bind ( 371) 2609 289.5 8.3e-78
NP_001124186 (OMIM: 153245) lymphoid enhancer-bind ( 386) 2546 282.9 8.7e-76
NP_001159591 (OMIM: 153245) lymphoid enhancer-bind ( 303) 2128 238.5 1.6e-62
XP_005263105 (OMIM: 153245) PREDICTED: lymphoid en ( 318) 2065 231.8 1.7e-60
NP_057353 (OMIM: 153245) lymphoid enhancer-binding ( 399) 1524 174.6 3.5e-43
XP_005263103 (OMIM: 153245) PREDICTED: lymphoid en ( 414) 1524 174.6 3.6e-43
XP_006714296 (OMIM: 153245) PREDICTED: lymphoid en ( 299) 1058 125.1 2e-28
XP_005263104 (OMIM: 153245) PREDICTED: lymphoid en ( 346) 1043 123.6 6.8e-28
NP_003193 (OMIM: 189908) transcription factor 7 is ( 384) 1042 123.5 7.9e-28
XP_006714742 (OMIM: 189908) PREDICTED: transcripti ( 429) 1039 123.3 1.1e-27
XP_006714747 (OMIM: 189908) PREDICTED: transcripti ( 365) 1032 122.4 1.6e-27
NP_998813 (OMIM: 189908) transcription factor 7 is ( 269) 851 103.1 7.6e-22
NP_963963 (OMIM: 189908) transcription factor 7 is ( 269) 851 103.1 7.6e-22
XP_011541914 (OMIM: 189908) PREDICTED: transcripti ( 244) 848 102.8 8.8e-22
NP_963965 (OMIM: 189908) transcription factor 7 is ( 268) 848 102.8 9.4e-22
NP_001128323 (OMIM: 189908) transcription factor 7 ( 269) 848 102.8 9.5e-22
XP_006714749 (OMIM: 189908) PREDICTED: transcripti ( 314) 848 102.9 1.1e-21
XP_011541911 (OMIM: 189908) PREDICTED: transcripti ( 289) 845 102.5 1.2e-21
NP_001185460 (OMIM: 125853,602228) transcription f ( 465) 805 98.5 3.3e-20
NP_001139758 (OMIM: 125853,602228) transcription f ( 442) 800 98.0 4.6e-20
NP_001185459 (OMIM: 125853,602228) transcription f ( 408) 798 97.7 5e-20
XP_016872082 (OMIM: 125853,602228) PREDICTED: tran ( 602) 801 98.2 5.3e-20
NP_001139746 (OMIM: 125853,602228) transcription f ( 602) 801 98.2 5.3e-20
XP_005270153 (OMIM: 125853,602228) PREDICTED: tran ( 482) 798 97.8 5.6e-20
XP_005270161 (OMIM: 125853,602228) PREDICTED: tran ( 438) 795 97.4 6.5e-20
XP_005270141 (OMIM: 125853,602228) PREDICTED: tran ( 619) 798 97.9 6.7e-20
XP_016872081 (OMIM: 125853,602228) PREDICTED: tran ( 619) 798 97.9 6.7e-20
XP_005270159 (OMIM: 125853,602228) PREDICTED: tran ( 461) 795 97.4 6.8e-20
XP_005270160 (OMIM: 125853,602228) PREDICTED: tran ( 447) 794 97.3 7.1e-20
NP_001139757 (OMIM: 125853,602228) transcription f ( 579) 796 97.6 7.4e-20
NP_001185455 (OMIM: 125853,602228) transcription f ( 579) 796 97.6 7.4e-20
NP_001185457 (OMIM: 125853,602228) transcription f ( 459) 793 97.2 7.8e-20
NP_001185458 (OMIM: 125853,602228) transcription f ( 459) 793 97.2 7.8e-20
XP_005270157 (OMIM: 125853,602228) PREDICTED: tran ( 470) 793 97.2 8e-20
XP_016872080 (OMIM: 125853,602228) PREDICTED: tran ( 620) 795 97.6 8.3e-20
XP_011538413 (OMIM: 125853,602228) PREDICTED: tran ( 596) 793 97.3 9.4e-20
NP_110383 (OMIM: 125853,602228) transcription fact ( 596) 793 97.3 9.4e-20
NP_001139755 (OMIM: 125853,602228) transcription f ( 489) 791 97.0 9.5e-20
XP_016872084 (OMIM: 125853,602228) PREDICTED: tran ( 513) 791 97.1 9.8e-20
NP_001185456 (OMIM: 125853,602228) transcription f ( 455) 788 96.7 1.1e-19
NP_001139756 (OMIM: 125853,602228) transcription f ( 455) 788 96.7 1.1e-19
XP_005270146 (OMIM: 125853,602228) PREDICTED: tran ( 584) 790 97.0 1.2e-19
XP_016872085 (OMIM: 125853,602228) PREDICTED: tran ( 478) 788 96.7 1.2e-19
XP_005270158 (OMIM: 125853,602228) PREDICTED: tran ( 464) 787 96.6 1.2e-19
XP_005270152 (OMIM: 125853,602228) PREDICTED: tran ( 518) 788 96.8 1.2e-19
NP_001185454 (OMIM: 125853,602228) transcription f ( 476) 787 96.6 1.2e-19
XP_005270142 (OMIM: 125853,602228) PREDICTED: tran ( 607) 789 96.9 1.3e-19
XP_005270145 (OMIM: 125853,602228) PREDICTED: tran ( 592) 788 96.8 1.4e-19
XP_011538412 (OMIM: 125853,602228) PREDICTED: tran ( 640) 788 96.8 1.4e-19
XP_016872076 (OMIM: 125853,602228) PREDICTED: tran ( 663) 788 96.9 1.5e-19
>>NP_001124185 (OMIM: 153245) lymphoid enhancer-binding (371 aa)
initn: 2609 init1: 2609 opt: 2609 Z-score: 1517.9 bits: 289.5 E(85289): 8.3e-78
Smith-Waterman score: 2609; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS
310 320 330 340 350 360
370
pF1KB7 GTGPRMTAAYI
:::::::::::
NP_001 GTGPRMTAAYI
370
>>NP_001124186 (OMIM: 153245) lymphoid enhancer-binding (386 aa)
initn: 2544 init1: 2544 opt: 2546 Z-score: 1481.6 bits: 282.9 E(85289): 8.7e-76
Smith-Waterman score: 2546; 99.5% identity (99.5% similar) in 365 aa overlap (1-365:1-364)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS
310 320 330 340 350 360
370
pF1KB7 GTGPRMTAAYI
: : :
NP_001 G-GKRSSFPTCKAKAATPGPLLEMEAC
370 380
>>NP_001159591 (OMIM: 153245) lymphoid enhancer-binding (303 aa)
initn: 2128 init1: 2128 opt: 2128 Z-score: 1243.6 bits: 238.5 E(85289): 1.6e-62
Smith-Waterman score: 2128; 100.0% identity (100.0% similar) in 301 aa overlap (71-371:3-303)
50 60 70 80 90 100
pF1KB7 ISHPEEEGDLADIKSSLVNESEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGG
::::::::::::::::::::::::::::::
NP_001 MAEVARQAQTSQEPYHDKAREHPDDGKHPDGG
10 20 30
110 120 130 140 150 160
pF1KB7 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIP
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB7 GPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFML
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB7 YMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA
220 230 240 250 260 270
350 360 370
pF1KB7 RDNYGKKKKRKREKLQESASGTGPRMTAAYI
:::::::::::::::::::::::::::::::
NP_001 RDNYGKKKKRKREKLQESASGTGPRMTAAYI
280 290 300
>>XP_005263105 (OMIM: 153245) PREDICTED: lymphoid enhanc (318 aa)
initn: 2063 init1: 2063 opt: 2065 Z-score: 1207.3 bits: 231.8 E(85289): 1.7e-60
Smith-Waterman score: 2065; 99.3% identity (99.3% similar) in 295 aa overlap (71-365:3-296)
50 60 70 80 90 100
pF1KB7 ISHPEEEGDLADIKSSLVNESEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGG
::::::::::::::::::::::::::::::
XP_005 MAEVARQAQTSQEPYHDKAREHPDDGKHPDGG
10 20 30
110 120 130 140 150 160
pF1KB7 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIP
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB7 GPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFML
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB7 YMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA
220 230 240 250 260 270
350 360 370
pF1KB7 RDNYGKKKKRKREKLQESASGTGPRMTAAYI
::::::::::::::::::::: : :
XP_005 RDNYGKKKKRKREKLQESASG-GKRSSFPTCKAKAATPGPLLEMEAC
280 290 300 310
>>NP_057353 (OMIM: 153245) lymphoid enhancer-binding fac (399 aa)
initn: 1514 init1: 1514 opt: 1524 Z-score: 896.3 bits: 174.6 E(85289): 3.5e-43
Smith-Waterman score: 2543; 93.0% identity (93.0% similar) in 399 aa overlap (1-371:1-399)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
130 140 150 160 170 180
190 200 210
pF1KB7 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW---------------------------
:::::::::::::::::::::::::::::::::
NP_057 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMS
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 -FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM
310 320 330 340 350 360
340 350 360 370
pF1KB7 QLYPGWSARDNYGKKKKRKREKLQESASGTGPRMTAAYI
:::::::::::::::::::::::::::::::::::::::
NP_057 QLYPGWSARDNYGKKKKRKREKLQESASGTGPRMTAAYI
370 380 390
>>XP_005263103 (OMIM: 153245) PREDICTED: lymphoid enhanc (414 aa)
initn: 1514 init1: 1514 opt: 1524 Z-score: 896.1 bits: 174.6 E(85289): 3.6e-43
Smith-Waterman score: 2480; 92.4% identity (92.4% similar) in 393 aa overlap (1-365:1-392)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS
130 140 150 160 170 180
190 200 210
pF1KB7 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW---------------------------
:::::::::::::::::::::::::::::::::
XP_005 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMS
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 -FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM
310 320 330 340 350 360
340 350 360 370
pF1KB7 QLYPGWSARDNYGKKKKRKREKLQESASGTGPRMTAAYI
::::::::::::::::::::::::::::: : :
XP_005 QLYPGWSARDNYGKKKKRKREKLQESASG-GKRSSFPTCKAKAATPGPLLEMEAC
370 380 390 400 410
>>XP_006714296 (OMIM: 153245) PREDICTED: lymphoid enhanc (299 aa)
initn: 1031 init1: 1031 opt: 1058 Z-score: 631.1 bits: 125.1 E(85289): 2e-28
Smith-Waterman score: 1679; 89.2% identity (89.2% similar) in 278 aa overlap (116-365:1-277)
90 100 110 120 130 140
pF1KB7 KAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVV
::::::::::::::::::::::::::::::
XP_006 MMPNMNNDPYMSNGSLSPPIPRTSNKVPVV
10 20 30
150 160 170 180 190 200
pF1KB7 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG
40 50 60 70 80 90
210 220 230
pF1KB7 QITPPLGW----------------------------FSHHMIPGPPGPHTTGIPHPAIVT
:::::::: ::::::::::::::::::::::::
XP_006 QITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIVT
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB7 PQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKE
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB7 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQE
220 230 240 250 260 270
360 370
pF1KB7 SASGTGPRMTAAYI
:::: : :
XP_006 SASG-GKRSSFPTCKAKAATPGPLLEMEAC
280 290
>>XP_005263104 (OMIM: 153245) PREDICTED: lymphoid enhanc (346 aa)
initn: 1033 init1: 1033 opt: 1043 Z-score: 621.7 bits: 123.6 E(85289): 6.8e-28
Smith-Waterman score: 1999; 90.7% identity (90.7% similar) in 323 aa overlap (71-365:3-324)
50 60 70 80 90 100
pF1KB7 ISHPEEEGDLADIKSSLVNESEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGG
::::::::::::::::::::::::::::::
XP_005 MAEVARQAQTSQEPYHDKAREHPDDGKHPDGG
10 20 30
110 120 130 140 150 160
pF1KB7 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LYNKGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITY
40 50 60 70 80 90
170 180 190 200 210
pF1KB7 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW-------
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYP
100 110 120 130 140 150
220 230 240 250
pF1KB7 ---------------------FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLM
:::::::::::::::::::::::::::::::::::::::
XP_005 ITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLM
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 HVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHAL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 SREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGTGPRMTAAYI
::::::::::::::::::::::::::::::::::::::::::::::::: : :
XP_005 SREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASG-GKRSSFPTCK
280 290 300 310 320 330
XP_005 AKAATPGPLLEMEAC
340
>>NP_003193 (OMIM: 189908) transcription factor 7 isofor (384 aa)
initn: 867 init1: 568 opt: 1042 Z-score: 620.6 bits: 123.5 E(85289): 7.9e-28
Smith-Waterman score: 1062; 50.3% identity (68.1% similar) in 386 aa overlap (1-365:1-362)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::..::::.:: .: : ::.. :.:::. : .: . ::. :::..:::::::
NP_003 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPER--DLAELKSSLVNE
10 20 30 40 50
70 80 90 100
pF1KB7 SEI------IPASNGH--------EVARQAQTSQEPYHDKAREHPDDG-KHPD--GGLYN
:: ::. : :. . ...:. . :: : .:: : :. .:.:.
NP_003 SEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB7 KGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDE
. . ::.. .. :. : . :. : : . . :: :.: :. : :
NP_003 E----TVYSAFNLL--MHYPPPSGAGQHPQPQPPLHK---ANQPPHGVPQLS---LY--E
120 130 140 150 160
170 180 190 200 210
pF1KB7 HF-SPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMI---
:: :: ::. :.:...:: . : .::. :: :. :..::. ..::.: .
NP_003 HFNSP--HPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLG
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB7 PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFM
: :: : ..::::::: :. ::: : .: : : :.. :.: :.: :::::::::
NP_003 SGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFM
230 240 250 260 270
280 290 300 310 320 330
pF1KB7 LYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS
::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS
280 290 300 310 320 330
340 350 360 370
pF1KB7 ARDNYGKKKKRKREKLQESASGTGPRMTAAYI
:::::::::.:.::: :::..: : :
NP_003 ARDNYGKKKRRSREKHQESTTG-GKRNAFGTYPEKAAAPAPFLPMTVL
340 350 360 370 380
>>XP_006714742 (OMIM: 189908) PREDICTED: transcription f (429 aa)
initn: 865 init1: 566 opt: 1039 Z-score: 618.3 bits: 123.3 E(85289): 1.1e-27
Smith-Waterman score: 1059; 49.9% identity (68.0% similar) in 387 aa overlap (1-365:1-364)
10 20 30 40 50 60
pF1KB7 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
::::..::::.:: .: : ::.. :.:::. : .: . ::. :::..:::::::
XP_006 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPER--DLAELKSSLVNE
10 20 30 40 50
70 80 90 100
pF1KB7 SEI------IPASNGH--------EVARQAQTSQEPYHDKAREHPDDG-KHPD--GGLYN
:: ::. : :. . ...:. . :: : .:: : :. .:.:.
XP_006 SEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB7 KGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDE
. . ::.. .. :. : . :. : : . . :: :.: :. : :
XP_006 E----TVYSAFNLL--MHYPPPSGAGQHPQPQPPLHK---ANQPPHGVPQLS---LY--E
120 130 140 150 160
170 180 190 200 210
pF1KB7 HF-SPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMI---
:: :: ::. :.:...:: . : .::. :: :. :..::. ..::.: .
XP_006 HFNSP--HPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLG
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB7 PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFM
: :: : ..::::::: :. ::: : .: : : :.. :.: :.: :::::::::
XP_006 SGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFM
230 240 250 260 270
280 290 300 310 320 330
pF1KB7 LYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS
::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS
280 290 300 310 320 330
340 350 360 370
pF1KB7 ARDNYGKKKKRKREKLQESASGTG-PRMTAAYI
:::::::::.:.::: :::.. : :.
XP_006 ARDNYGKKKRRSREKHQESTTDPGSPKKCRARFGLNQQTDWCGPCRWVCPHHRSPFALSC
340 350 360 370 380 390
371 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:52:41 2016 done: Tue Nov 8 10:52:42 2016
Total Scan time: 8.210 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]