Result of FASTA (omim) for
pF1KB7717
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7717, 425 aa
1>>>pF1KB7717 425 - 425 aa - 425 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8802+/-0.000732; mu= 12.4820+/- 0.045
mean_var=354.2625+/-71.913, 0's: 0 Z-trim(114.4): 1982 B-trim: 119 in 1/51
Lambda= 0.068141
statistics sampled from 22004 (24271) to 22004 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.285), width: 16
Scan time: 6.910
The best scores are: opt bits E(85289)
NP_066574 (OMIM: 194500) zinc finger protein 2 iso ( 425) 2994 309.1 1.4e-83
NP_001017396 (OMIM: 194500) zinc finger protein 2 ( 383) 2720 282.1 1.7e-75
NP_001278533 (OMIM: 194500) zinc finger protein 2 ( 345) 2393 249.9 7.5e-66
NP_001269327 (OMIM: 194500) zinc finger protein 2 ( 387) 2393 250.0 7.9e-66
NP_001278534 (OMIM: 194500) zinc finger protein 2 ( 438) 2378 248.6 2.3e-65
NP_003437 (OMIM: 300024) zinc finger protein 157 [ ( 506) 1359 148.5 3.6e-35
XP_011533137 (OMIM: 604082) PREDICTED: zinc finger ( 457) 1299 142.5 2e-33
NP_003431 (OMIM: 604082) zinc finger protein 140 i ( 457) 1299 142.5 2e-33
XP_011533135 (OMIM: 604082) PREDICTED: zinc finger ( 458) 1287 141.4 4.6e-33
XP_011533136 (OMIM: 604082) PREDICTED: zinc finger ( 458) 1287 141.4 4.6e-33
NP_003443 (OMIM: 603132) zinc finger protein 189 i ( 626) 1247 137.7 8.2e-32
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 1227 135.7 3.2e-31
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 1227 135.7 3.2e-31
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 1227 135.7 3.2e-31
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 1227 135.7 3.3e-31
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 1227 135.7 3.3e-31
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1227 135.8 3.3e-31
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1227 135.8 3.3e-31
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1227 135.8 3.3e-31
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 1227 135.8 3.3e-31
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 1227 135.8 3.3e-31
NP_001316587 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316593 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316592 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316588 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316589 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316586 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316590 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
XP_011517658 (OMIM: 194528) PREDICTED: zinc finger ( 420) 1217 134.4 5.2e-31
NP_001316591 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_001316585 (OMIM: 194528) zinc finger protein 25 ( 420) 1217 134.4 5.2e-31
NP_062537 (OMIM: 194537) zinc finger protein 26 is ( 533) 1215 134.4 6.7e-31
XP_016875410 (OMIM: 194537) PREDICTED: zinc finger ( 546) 1201 133.0 1.8e-30
NP_001243208 (OMIM: 194537) zinc finger protein 26 ( 566) 1201 133.1 1.8e-30
XP_016875409 (OMIM: 194537) PREDICTED: zinc finger ( 575) 1201 133.1 1.8e-30
NP_001274461 (OMIM: 603974) zinc finger protein 92 ( 554) 1182 131.2 6.5e-30
XP_016875412 (OMIM: 194537) PREDICTED: zinc finger ( 513) 1178 130.7 8.2e-30
XP_005266240 (OMIM: 194537) PREDICTED: zinc finger ( 513) 1178 130.7 8.2e-30
XP_016875411 (OMIM: 194537) PREDICTED: zinc finger ( 513) 1178 130.7 8.2e-30
NP_001317443 (OMIM: 194537) zinc finger protein 26 ( 513) 1178 130.7 8.2e-30
NP_001317442 (OMIM: 194537) zinc finger protein 26 ( 513) 1178 130.7 8.2e-30
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 1175 130.6 1.1e-29
XP_005266245 (OMIM: 604082) PREDICTED: zinc finger ( 423) 1169 129.7 1.4e-29
NP_001265161 (OMIM: 603132) zinc finger protein 18 ( 611) 1169 130.0 1.6e-29
NP_065984 (OMIM: 613864) zinc finger protein 317 i ( 595) 1165 129.6 2.1e-29
XP_011533138 (OMIM: 604082) PREDICTED: zinc finger ( 424) 1157 128.5 3.1e-29
XP_011533139 (OMIM: 604082) PREDICTED: zinc finger ( 424) 1157 128.5 3.1e-29
NP_001291966 (OMIM: 194522) zinc finger protein 33 ( 666) 1154 128.6 4.7e-29
NP_001291969 (OMIM: 194522) zinc finger protein 33 ( 666) 1154 128.6 4.7e-29
NP_001291965 (OMIM: 194522) zinc finger protein 33 ( 666) 1154 128.6 4.7e-29
>>NP_066574 (OMIM: 194500) zinc finger protein 2 isoform (425 aa)
initn: 2994 init1: 2994 opt: 2994 Z-score: 1621.7 bits: 309.1 E(85289): 1.4e-83
Smith-Waterman score: 2994; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)
10 20 30 40 50 60
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 DVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 LCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 TFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 RSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSIL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 TRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 KIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 KIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYA
370 380 390 400 410 420
pF1KB7 KQGID
:::::
NP_066 KQGID
>>NP_001017396 (OMIM: 194500) zinc finger protein 2 isof (383 aa)
initn: 2720 init1: 2720 opt: 2720 Z-score: 1476.6 bits: 282.1 E(85289): 1.7e-75
Smith-Waterman score: 2720; 100.0% identity (100.0% similar) in 383 aa overlap (43-425:1-383)
20 30 40 50 60 70
pF1KB7 SVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQPDVIFQLKRGDKP
::::::::::::::::::::::::::::::
NP_001 MLENYNSIVSLGLPVPQPDVIFQLKRGDKP
10 20 30
80 90 100 110 120 130
pF1KB7 WMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSPLCPKFEVHTPNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSPLCPKFEVHTPNG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 RMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGKTFFDHSSLTRHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGKTFFDHSSLTRHQ
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 RTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFDRSSLTVHQRIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFDRSSLTVHQRIHT
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 GEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSILTRHQLIHTGRKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSILTRHQLIHTGRKP
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 YECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQKIHTGDKPYECS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQKIHTGDKPYECS
280 290 300 310 320 330
380 390 400 410 420
pF1KB7 ECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYAKQGID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYAKQGID
340 350 360 370 380
>>NP_001278533 (OMIM: 194500) zinc finger protein 2 isof (345 aa)
initn: 2393 init1: 2393 opt: 2393 Z-score: 1303.2 bits: 249.9 E(85289): 7.5e-66
Smith-Waterman score: 2393; 100.0% identity (100.0% similar) in 337 aa overlap (89-425:9-345)
60 70 80 90 100 110
pF1KB7 QPDVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQ
::::::::::::::::::::::::::::::
NP_001 MLENYNSIVSLDWETKPEIHDASDKKSEGSLRECLGRQ
10 20 30
120 130 140 150 160 170
pF1KB7 SPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB7 GKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAF
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB7 FDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKS
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB7 ILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQ
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB7 HQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRR
280 290 300 310 320 330
420
pF1KB7 YAKQGID
:::::::
NP_001 YAKQGID
340
>>NP_001269327 (OMIM: 194500) zinc finger protein 2 isof (387 aa)
initn: 2393 init1: 2393 opt: 2393 Z-score: 1302.8 bits: 250.0 E(85289): 7.9e-66
Smith-Waterman score: 2631; 91.1% identity (91.1% similar) in 425 aa overlap (1-425:1-387)
10 20 30 40 50 60
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSL-------
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSP
:::::::::::::::::::::::::::::
NP_001 -------------------------------DWETKPEIHDASDKKSEGSLRECLGRQSP
60 70 80
130 140 150 160 170 180
pF1KB7 LCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGK
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB7 TFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFD
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 RSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSIL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB7 TRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQ
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB7 KIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYA
330 340 350 360 370 380
pF1KB7 KQGID
:::::
NP_001 KQGID
>>NP_001278534 (OMIM: 194500) zinc finger protein 2 isof (438 aa)
initn: 2871 init1: 2378 opt: 2378 Z-score: 1294.4 bits: 248.6 E(85289): 2.3e-65
Smith-Waterman score: 2958; 97.0% identity (97.0% similar) in 438 aa overlap (1-425:1-438)
10 20 30 40 50 60
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
10 20 30 40 50 60
70 80 90 100
pF1KB7 DVIFQLKRGDKPWMVDLHGSEEREWPESVSL-------------DWETKPEIHDASDKKS
::::::::::::::::::::::::::::::: ::::::::::::::::
NP_001 DVIFQLKRGDKPWMVDLHGSEEREWPESVSLAQEKNCICFLFVPDWETKPEIHDASDKKS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 EGSLRECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGSLRECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREIL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 TKERHQECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKERHQECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGES
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 PYECSVCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYECSVCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYEC
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB7 HQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECG
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB7 KAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFS
370 380 390 400 410 420
410 420
pF1KB7 SKSSVIQHQRRYAKQGID
::::::::::::::::::
NP_001 SKSSVIQHQRRYAKQGID
430
>>NP_003437 (OMIM: 300024) zinc finger protein 157 [Homo (506 aa)
initn: 4277 init1: 1130 opt: 1359 Z-score: 752.4 bits: 148.5 E(85289): 3.6e-35
Smith-Waterman score: 1359; 47.6% identity (73.0% similar) in 422 aa overlap (6-419:19-436)
10 20 30 40
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENY
: . ::.:::::: :: .:: :: : :: ..:.::::.:
NP_003 MPANGTSPQRFPALIPGEPGRSFEGSVSFEDVAVDFTRQEWHRLDPAQRTMHKDVMLETY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 NSIVSLGLPVPQPDVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKS
....:.:: : .:..::.:.::.. :... ..: . . :.:: . . : . ...
NP_003 SNLASVGLCVAKPEMIFKLERGEELWILEEESSGHG-YSGSLSL-LCGNGSVGDNALRHD
70 80 90 100 110
110 120 130 140 150 160
pF1KB7 EGSLR----ECLGRQSPL--CPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSA
. :. . : .. : : : .: . .:..: :. . :. :.:
NP_003 NDLLHHQKIQTLDQNVEYNGCRK-AFHEKTGFV-RRKRTPRGDKNFECHECGKAYCRKSN
120 130 140 150 160 170
170 180 190 200 210
pF1KB7 LSRE--ILTKERHQECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRH
: .. : : :: ::..:.::: .: : ::.:::::.:..: ::::.:...:.: :
NP_003 LVEHLRIHTGERPYECGECAKTFSARSYLIAHQKTHTGERPFECNECGKSFGRKSQLILH
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB7 LMSHTGESPYECSVCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIH
.:::: ::::. :.:.: ....::.::: ::::::..:.::::.: . :::.:.: :
NP_003 TRTHTGERPYECTECGKTFSEKATLTIHQRTHTGEKPYECSECGKTFRVKISLTQHHRTH
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB7 TGESPYECHQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDP
:::.:::: .::: : :. :..:: ::::.:::::.:::: : .:: ::..:.:.
NP_003 TGEKPYECGECGKNFRAKKSLNQHQRIHTGEKPYECGECGKFFRMKMTLNNHQRTHTGEK
300 310 320 330 340 350
340 350 360 370 380 390
pF1KB7 RYQCNECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFEC
::::::::.: .::: ::.::::.:::::.:::.:: . :: .:::.:.::::.::
NP_003 PYQCNECGKSFRVHSSLGIHQRIHTGEKPYECNECGNAFYVKARLIEHQRMHSGEKPYEC
360 370 380 390 400 410
400 410 420
pF1KB7 TVCGKVFSSKSSVIQHQRRYAKQGID
. :::.:: :.:. ::.: .
NP_003 SECGKIFSMKKSLCQHRRTHTGEKPYECSECGNAFYVKVRLIEHQRIHTGERPFECQECG
420 430 440 450 460 470
>>XP_011533137 (OMIM: 604082) PREDICTED: zinc finger pro (457 aa)
initn: 4409 init1: 1035 opt: 1299 Z-score: 720.9 bits: 142.5 E(85289): 2e-33
Smith-Waterman score: 1299; 49.3% identity (69.7% similar) in 416 aa overlap (11-419:3-407)
10 20 30 40 50 60
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
: ::::.:::. :..:::. : : :::::. ::::::. .::::: . .:
XP_011 MSQGSVTFRDVAIDFSQEEWKWLQPAQRDLYRCVMLENYGHLVSLGLSISKP
10 20 30 40 50
70 80 90 100 110
pF1KB7 DVIFQLKRGDKPWMVDLHGSEEREWPE-SVSLDWETKPEIHDAS------DKKSEGSLRE
::. :..: .::. :..: . ::: :.. ::.: : : .:. . :
XP_011 DVVSLLEQGKEPWL----GKREVKRDLFSVS---ESSGEIKDFSPKNVIYDDSSQYLIME
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 CLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQ
. :.:. .:. : .: :: ..:....: .. .: : ::
XP_011 RILSQGPVYSSFKGGWKCKDHTEMLQENQGCIRKVTVSHQEALAQHMNIS----TVERPY
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 ECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSV
: .::::: . ::. ::::::::::: :.::::.::. :.: .: : :::..:.::.
XP_011 GCHECGKTFGRRFSLVLHQRTHTGEKPYACKECGKTFSQISNLVKHQMIHTGKKPHECKD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 CSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKA
:.:.: : : ::: ::::::..:.:::::: :.:::::::: :.. : :..::::
XP_011 CNKTFSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIHIGKKQYICRKCGKA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 FSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDR
::. : : :::. :::.::::: :::::: : :.:::. :. :.:::: ::: .
XP_011 FSSGSELIRHQITHTGEKPYECIECGKAFRRFSHLTRHQSIHTTKTPYECNECRKAFRCH
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 SSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVI
: : .::.::.:.: :::.::::.:. . : .: . ::::::. :. : :.:: . :.:
XP_011 SFLIKHQRIHAGEKLYECDECGKVFTWHASLIQHTKSHTGEKPYACAECDKAFSRSFSLI
350 360 370 380 390 400
420
pF1KB7 QHQRRYAKQGID
::: .
XP_011 LHQRTHTGEKPYVCKVCNKSFSWSSNLAKHQRTHTLDNPYEYENSFNYHSFLTEHQ
410 420 430 440 450
>>NP_003431 (OMIM: 604082) zinc finger protein 140 isofo (457 aa)
initn: 4409 init1: 1035 opt: 1299 Z-score: 720.9 bits: 142.5 E(85289): 2e-33
Smith-Waterman score: 1299; 49.3% identity (69.7% similar) in 416 aa overlap (11-419:3-407)
10 20 30 40 50 60
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP
: ::::.:::. :..:::. : : :::::. ::::::. .::::: . .:
NP_003 MSQGSVTFRDVAIDFSQEEWKWLQPAQRDLYRCVMLENYGHLVSLGLSISKP
10 20 30 40 50
70 80 90 100 110
pF1KB7 DVIFQLKRGDKPWMVDLHGSEEREWPE-SVSLDWETKPEIHDAS------DKKSEGSLRE
::. :..: .::. :..: . ::: :.. ::.: : : .:. . :
NP_003 DVVSLLEQGKEPWL----GKREVKRDLFSVS---ESSGEIKDFSPKNVIYDDSSQYLIME
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 CLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQ
. :.:. .:. : .: :: ..:....: .. .: : ::
NP_003 RILSQGPVYSSFKGGWKCKDHTEMLQENQGCIRKVTVSHQEALAQHMNIS----TVERPY
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 ECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSV
: .::::: . ::. ::::::::::: :.::::.::. :.: .: : :::..:.::.
NP_003 GCHECGKTFGRRFSLVLHQRTHTGEKPYACKECGKTFSQISNLVKHQMIHTGKKPHECKD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 CSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKA
:.:.: : : ::: ::::::..:.:::::: :.:::::::: :.. : :..::::
NP_003 CNKTFSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIHIGKKQYICRKCGKA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 FSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDR
::. : : :::. :::.::::: :::::: : :.:::. :. :.:::: ::: .
NP_003 FSSGSELIRHQITHTGEKPYECIECGKAFRRFSHLTRHQSIHTTKTPYECNECRKAFRCH
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 SSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVI
: : .::.::.:.: :::.::::.:. . : .: . ::::::. :. : :.:: . :.:
NP_003 SFLIKHQRIHAGEKLYECDECGKVFTWHASLIQHTKSHTGEKPYACAECDKAFSRSFSLI
350 360 370 380 390 400
420
pF1KB7 QHQRRYAKQGID
::: .
NP_003 LHQRTHTGEKPYVCKVCNKSFSWSSNLAKHQRTHTLDNPYEYENSFNYHSFLTEHQ
410 420 430 440 450
>>XP_011533135 (OMIM: 604082) PREDICTED: zinc finger pro (458 aa)
initn: 4409 init1: 1035 opt: 1287 Z-score: 714.6 bits: 141.4 E(85289): 4.6e-33
Smith-Waterman score: 1287; 49.2% identity (69.5% similar) in 417 aa overlap (11-419:3-408)
10 20 30 40 50
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSL-GLPVPQ
: ::::.:::. :..:::. : : :::::. ::::::. .::: :: . .
XP_011 MSQGSVTFRDVAIDFSQEEWKWLQPAQRDLYRCVMLENYGHLVSLAGLSISK
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PDVIFQLKRGDKPWMVDLHGSEEREWPE-SVSLDWETKPEIHDAS------DKKSEGSLR
:::. :..: .::. :..: . ::: :.. ::.: : : .:. .
XP_011 PDVVSLLEQGKEPWL----GKREVKRDLFSVS---ESSGEIKDFSPKNVIYDDSSQYLIM
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 ECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERH
: . :.:. .:. : .: :: ..:....: .. .: : ::
XP_011 ERILSQGPVYSSFKGGWKCKDHTEMLQENQGCIRKVTVSHQEALAQHMNIS----TVERP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECS
: .::::: . ::. ::::::::::: :.::::.::. :.: .: : :::..:.::.
XP_011 YGCHECGKTFGRRFSLVLHQRTHTGEKPYACKECGKTFSQISNLVKHQMIHTGKKPHECK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 VCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGK
:.:.: : : ::: ::::::..:.:::::: :.:::::::: :.. : :..:::
XP_011 DCNKTFSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIHIGKKQYICRKCGK
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 AFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFD
:::. : : :::. :::.::::: :::::: : :.:::. :. :.:::: :::
XP_011 AFSSGSELIRHQITHTGEKPYECIECGKAFRRFSHLTRHQSIHTTKTPYECNECRKAFRC
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 RSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSV
.: : .::.::.:.: :::.::::.:. . : .: . ::::::. :. : :.:: . :.
XP_011 HSFLIKHQRIHAGEKLYECDECGKVFTWHASLIQHTKSHTGEKPYACAECDKAFSRSFSL
350 360 370 380 390 400
420
pF1KB7 IQHQRRYAKQGID
: ::: .
XP_011 ILHQRTHTGEKPYVCKVCNKSFSWSSNLAKHQRTHTLDNPYEYENSFNYHSFLTEHQ
410 420 430 440 450
>>XP_011533136 (OMIM: 604082) PREDICTED: zinc finger pro (458 aa)
initn: 4409 init1: 1035 opt: 1287 Z-score: 714.6 bits: 141.4 E(85289): 4.6e-33
Smith-Waterman score: 1287; 49.2% identity (69.5% similar) in 417 aa overlap (11-419:3-408)
10 20 30 40 50
pF1KB7 MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSL-GLPVPQ
: ::::.:::. :..:::. : : :::::. ::::::. .::: :: . .
XP_011 MSQGSVTFRDVAIDFSQEEWKWLQPAQRDLYRCVMLENYGHLVSLAGLSISK
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PDVIFQLKRGDKPWMVDLHGSEEREWPE-SVSLDWETKPEIHDAS------DKKSEGSLR
:::. :..: .::. :..: . ::: :.. ::.: : : .:. .
XP_011 PDVVSLLEQGKEPWL----GKREVKRDLFSVS---ESSGEIKDFSPKNVIYDDSSQYLIM
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 ECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERH
: . :.:. .:. : .: :: ..:....: .. .: : ::
XP_011 ERILSQGPVYSSFKGGWKCKDHTEMLQENQGCIRKVTVSHQEALAQHMNIS----TVERP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 QECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECS
: .::::: . ::. ::::::::::: :.::::.::. :.: .: : :::..:.::.
XP_011 YGCHECGKTFGRRFSLVLHQRTHTGEKPYACKECGKTFSQISNLVKHQMIHTGKKPHECK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 VCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGK
:.:.: : : ::: ::::::..:.:::::: :.:::::::: :.. : :..:::
XP_011 DCNKTFSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIHIGKKQYICRKCGK
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 AFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFD
:::. : : :::. :::.::::: :::::: : :.:::. :. :.:::: :::
XP_011 AFSSGSELIRHQITHTGEKPYECIECGKAFRRFSHLTRHQSIHTTKTPYECNECRKAFRC
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 RSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSV
.: : .::.::.:.: :::.::::.:. . : .: . ::::::. :. : :.:: . :.
XP_011 HSFLIKHQRIHAGEKLYECDECGKVFTWHASLIQHTKSHTGEKPYACAECDKAFSRSFSL
350 360 370 380 390 400
420
pF1KB7 IQHQRRYAKQGID
: ::: .
XP_011 ILHQRTHTGEKPYVCKVCNKSFSWSSNLAKHQRTHTLDNPYEYENSFNYHSFLTEHQ
410 420 430 440 450
425 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:01:24 2016 done: Sat Nov 5 01:01:25 2016
Total Scan time: 6.910 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]