Result of FASTA (omim) for
pF1KB7784
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7784, 510 aa
1>>>pF1KB7784 510 - 510 aa - 510 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5728+/-0.000674; mu= 14.1666+/- 0.041
mean_var=295.6653+/-57.272, 0's: 0 Z-trim(114.6): 2011 B-trim: 94 in 1/51
Lambda= 0.074589
statistics sampled from 22241 (24565) to 22241 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.288), width: 16
Scan time: 9.970
The best scores are: opt bits E(85289)
XP_005262526 (OMIM: 314997) PREDICTED: zinc finger ( 510) 3554 397.1 6.3e-110
XP_011529693 (OMIM: 314997) PREDICTED: zinc finger ( 510) 3554 397.1 6.3e-110
NP_009062 (OMIM: 314997) zinc finger protein 75D i ( 510) 3554 397.1 6.3e-110
XP_011529698 (OMIM: 314997) PREDICTED: zinc finger ( 342) 2407 273.4 7.4e-73
XP_011520948 (OMIM: 601473) PREDICTED: zinc finger ( 500) 2336 266.0 1.8e-70
XP_005262528 (OMIM: 314997) PREDICTED: zinc finger ( 303) 2128 243.3 7.6e-64
XP_011529697 (OMIM: 314997) PREDICTED: zinc finger ( 360) 1990 228.6 2.4e-59
XP_016885308 (OMIM: 314997) PREDICTED: zinc finger ( 376) 1982 227.7 4.5e-59
XP_016885307 (OMIM: 314997) PREDICTED: zinc finger ( 364) 1979 227.4 5.6e-59
XP_016885309 (OMIM: 314997) PREDICTED: zinc finger ( 339) 1977 227.1 6.3e-59
XP_011529699 (OMIM: 314997) PREDICTED: zinc finger ( 339) 1977 227.1 6.3e-59
NP_001171992 (OMIM: 314997) zinc finger protein 75 ( 415) 1969 226.4 1.3e-58
NP_694573 (OMIM: 601473) zinc finger protein 75A i ( 296) 1229 146.5 1e-34
XP_016879131 (OMIM: 601473) PREDICTED: zinc finger ( 296) 1229 146.5 1e-34
XP_011520949 (OMIM: 601473) PREDICTED: zinc finger ( 296) 1229 146.5 1e-34
NP_001289038 (OMIM: 601473) zinc finger protein 75 ( 537) 1229 147.0 1.3e-34
NP_001310970 (OMIM: 601473) zinc finger protein 75 ( 537) 1229 147.0 1.3e-34
XP_016879132 (OMIM: 601473) PREDICTED: zinc finger ( 275) 1115 134.2 4.7e-31
XP_016879133 (OMIM: 601473) PREDICTED: zinc finger ( 275) 1115 134.2 4.7e-31
NP_001311014 (OMIM: 601473) zinc finger protein 75 ( 233) 896 110.5 5.4e-24
XP_016879134 (OMIM: 601473) PREDICTED: zinc finger ( 250) 896 110.6 5.6e-24
XP_006720896 (OMIM: 604191) PREDICTED: zinc finger ( 598) 807 101.6 6.6e-21
NP_001284497 (OMIM: 194631) zinc finger protein 12 ( 351) 705 90.3 1e-17
XP_011542574 (OMIM: 194631) PREDICTED: zinc finger ( 343) 704 90.1 1.1e-17
XP_011513164 (OMIM: 616474) PREDICTED: zinc finger ( 479) 691 89.0 3.4e-17
NP_001018854 (OMIM: 616474) zinc finger and SCAN d ( 479) 691 89.0 3.4e-17
XP_011513166 (OMIM: 616474) PREDICTED: zinc finger ( 450) 688 88.6 4.1e-17
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 675 87.2 1.1e-16
NP_001070663 (OMIM: 611703) zinc finger protein 43 ( 470) 675 87.3 1.1e-16
NP_085137 (OMIM: 611703) zinc finger protein 436 [ ( 470) 675 87.3 1.1e-16
XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 658 85.8 4.9e-16
NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 658 85.8 4.9e-16
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 653 84.7 5e-16
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 653 84.9 5.7e-16
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 653 84.9 5.7e-16
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 653 84.9 5.7e-16
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 653 84.9 5.7e-16
XP_011517301 (OMIM: 603132) PREDICTED: zinc finger ( 575) 654 85.1 5.8e-16
NP_009066 (OMIM: 194552) zinc finger protein 79 is ( 498) 653 84.9 5.9e-16
XP_006717343 (OMIM: 603132) PREDICTED: zinc finger ( 584) 654 85.2 5.9e-16
XP_011517300 (OMIM: 603132) PREDICTED: zinc finger ( 584) 654 85.2 5.9e-16
XP_016870610 (OMIM: 603132) PREDICTED: zinc finger ( 584) 654 85.2 5.9e-16
NP_932094 (OMIM: 603132) zinc finger protein 189 i ( 584) 654 85.2 5.9e-16
XP_006717344 (OMIM: 603132) PREDICTED: zinc finger ( 584) 654 85.2 5.9e-16
XP_006716717 (OMIM: 194531) PREDICTED: zinc finger ( 590) 654 85.2 5.9e-16
XP_006716719 (OMIM: 194531) PREDICTED: zinc finger ( 590) 654 85.2 5.9e-16
NP_001269726 (OMIM: 194531) zinc finger protein 7 ( 590) 654 85.2 5.9e-16
XP_011515599 (OMIM: 194531) PREDICTED: zinc finger ( 590) 654 85.2 5.9e-16
NP_001265161 (OMIM: 603132) zinc finger protein 18 ( 611) 654 85.2 6e-16
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 654 85.2 6e-16
>>XP_005262526 (OMIM: 314997) PREDICTED: zinc finger pro (510 aa)
initn: 3554 init1: 3554 opt: 3554 Z-score: 2094.5 bits: 397.1 E(85289): 6.3e-110
Smith-Waterman score: 3554; 100.0% identity (100.0% similar) in 510 aa overlap (1-510:1-510)
10 20 30 40 50 60
pF1KB7 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
430 440 450 460 470 480
490 500 510
pF1KB7 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
::::::::::::::::::::::::::::::
XP_005 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
490 500 510
>>XP_011529693 (OMIM: 314997) PREDICTED: zinc finger pro (510 aa)
initn: 3554 init1: 3554 opt: 3554 Z-score: 2094.5 bits: 397.1 E(85289): 6.3e-110
Smith-Waterman score: 3554; 100.0% identity (100.0% similar) in 510 aa overlap (1-510:1-510)
10 20 30 40 50 60
pF1KB7 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
430 440 450 460 470 480
490 500 510
pF1KB7 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
::::::::::::::::::::::::::::::
XP_011 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
490 500 510
>>NP_009062 (OMIM: 314997) zinc finger protein 75D isofo (510 aa)
initn: 3554 init1: 3554 opt: 3554 Z-score: 2094.5 bits: 397.1 E(85289): 6.3e-110
Smith-Waterman score: 3554; 100.0% identity (100.0% similar) in 510 aa overlap (1-510:1-510)
10 20 30 40 50 60
pF1KB7 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 AVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 EVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 YRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCS
430 440 450 460 470 480
490 500 510
pF1KB7 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
::::::::::::::::::::::::::::::
NP_009 LCKRNFSRRSSLLRHQKLHRRREACLVSPN
490 500 510
>>XP_011529698 (OMIM: 314997) PREDICTED: zinc finger pro (342 aa)
initn: 2407 init1: 2407 opt: 2407 Z-score: 1429.0 bits: 273.4 E(85289): 7.4e-73
Smith-Waterman score: 2407; 100.0% identity (100.0% similar) in 342 aa overlap (169-510:1-342)
140 150 160 170 180 190
pF1KB7 TAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTYRVLQEQLGWNTHKETQPV
::::::::::::::::::::::::::::::
XP_011 MGVFQKEYWNTYRVLQEQLGWNTHKETQPV
10 20 30
200 210 220 230 240 250
pF1KB7 YERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKT
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB7 LYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGRE
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB7 NPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSS
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB7 DLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHT
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB7 HQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKL
280 290 300 310 320 330
500 510
pF1KB7 HRRREACLVSPN
::::::::::::
XP_011 HRRREACLVSPN
340
>>XP_011520948 (OMIM: 601473) PREDICTED: zinc finger pro (500 aa)
initn: 1758 init1: 1676 opt: 2336 Z-score: 1386.3 bits: 266.0 E(85289): 1.8e-70
Smith-Waterman score: 2336; 68.2% identity (84.6% similar) in 500 aa overlap (1-499:1-499)
10 20 30 40 50 60
pF1KB7 MAMRELNADSCSSPQMGAMWETSGSVKENSSQSKKYSTKIENLGPESACRHFWSFRYHEA
: : .:.. . .::. :.:::.: ..:.:.:::: : ... : :.:.: :: .: : ::
XP_011 MMMVDLKVAAYLDPQIRALWETKGPARESSGQSKK-SPQMDCLDPKSSCWHFRNFTYDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TGPLETISQLQKLCHQWLRPEIHSKEQILEMLVLEQFLSILPKETQNWVQKHHPQNVKQA
:: :..:.::.::: ::.:::::::::::.:::::::.:::.:::. .::::::....:
XP_011 GGPREAVSKLQELCHLWLKPEIHSKEQILELLVLEQFLTILPRETQTQMQKHHPQSIEEA
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 LVLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQ-KEYWNT
..::: :::: : : :..::::::::::: :: : .: ::.: ::.:: : .:.:::
XP_011 VALVEHLQRESGQTWNGVAVHELGKEAVLLGETAEASSFGLKPTESQPVGVSQDEEFWNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 YRVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTFED
:. :::::. ::::::.::::::: ::.::. :: : : .. . .:::: ::::::.
XP_011 YEGLQEQLSRNTHKETEPVYERAVPTQQILAFPEQTNTKDWTVTPEHVLPESQSLLTFEE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 VAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSG
::.:::.:::.::.: .:.:::::::. ::::::::::::::: : .:.:.: :::.:.
XP_011 VAMYFSQEEWELLDPTQKALYNDVMQENYETVISLGLKLKNDTENHQPVSLSDLEIQASA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 CEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGP
.:::...:. ::: :.:: : : : :::. :: ::::: .: :::: :::: : :
XP_011 GVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDC
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB7 TGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIK
. :::::::::::.::::::::::.:::: ::::::::::.:::::::::::. ::::::
XP_011 AREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIK
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB7 PYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTC
::.:::::::::.::::::::: ::::::: : ::::.: ::::::::.:::::::::::
XP_011 PYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTC
420 430 440 450 460 470
480 490 500 510
pF1KB7 SLCKRNFSRRSSLLRHQKLHRRREACLVSPN
:.:.::::::::::::::::
XP_011 SICRRNFSRRSSLLRHQKLHL
480 490 500
>>XP_005262528 (OMIM: 314997) PREDICTED: zinc finger pro (303 aa)
initn: 2128 init1: 2128 opt: 2128 Z-score: 1267.2 bits: 243.3 E(85289): 7.6e-64
Smith-Waterman score: 2128; 100.0% identity (100.0% similar) in 303 aa overlap (208-510:1-303)
180 190 200 210 220 230
pF1KB7 NTYRVLQEQLGWNTHKETQPVYERAVHDQQMLALSEQKRIKHWKMASKLILPESLSLLTF
::::::::::::::::::::::::::::::
XP_005 MLALSEQKRIKHWKMASKLILPESLSLLTF
10 20 30
240 250 260 270 280 290
pF1KB7 EDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQT
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB7 SGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGK
100 110 120 130 140 150
360 370 380 390 400 410
pF1KB7 GPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQG
160 170 180 190 200 210
420 430 440 450 460 470
pF1KB7 IKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPY
220 230 240 250 260 270
480 490 500 510
pF1KB7 TCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
:::::::::::::::::::::::::::::::::
XP_005 TCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
280 290 300
>>XP_011529697 (OMIM: 314997) PREDICTED: zinc finger pro (360 aa)
initn: 1969 init1: 1969 opt: 1990 Z-score: 1186.3 bits: 228.6 E(85289): 2.4e-59
Smith-Waterman score: 1990; 82.4% identity (88.9% similar) in 352 aa overlap (162-510:15-360)
140 150 160 170 180 190
pF1KB7 DGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTYRVLQEQLGW-N
.: . :::. :. . :. : .
XP_011 MTHYHLPRSICLLHRPNRSQPMS------WERRQCSWEEQQWPQ
10 20 30
200 210 220 230 240
pF1KB7 THKETQPVYERAVHDQQMLALSEQKRIKHWK--MASKLILPESLSLLTFEDVAVYFSEEE
. . .: .. : ... ... . : ...: : . ::::::::::::::::
XP_011 ASSGSQQSPNQWVCSRKNIGIHTGYYKNSWAGTLTKKPSLYMKESLLTFEDVAVYFSEEE
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB7 WQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRM
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB7 KIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQ
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB7 ECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGK
220 230 240 250 260 270
430 440 450 460 470 480
pF1KB7 SFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSR
280 290 300 310 320 330
490 500 510
pF1KB7 RSSLLRHQKLHRRREACLVSPN
::::::::::::::::::::::
XP_011 RSSLLRHQKLHRRREACLVSPN
340 350 360
>>XP_016885308 (OMIM: 314997) PREDICTED: zinc finger pro (376 aa)
initn: 1969 init1: 1969 opt: 1982 Z-score: 1181.5 bits: 227.7 E(85289): 4.5e-59
Smith-Waterman score: 1984; 78.8% identity (86.3% similar) in 373 aa overlap (152-510:7-376)
130 140 150 160 170
pF1KB7 VLVEFLQREPDGTKNEVTAHELGKEAVLLGGTAVAPGFKWKPAEPQP--------MGVF-
:.:..: . . :.: ::..
XP_016 MHSPNLGSALVPP---STTTPKPKVSSVLMRMGIIS
10 20 30
180 190 200 210 220
pF1KB7 --QKEYWNTYRVLQEQLGW-NTHKETQPVYERAVHDQQMLALSEQKRIKHWK--MASKLI
: :. . :. : .. . .: .. : ... ... . : ...:
XP_016 RSQPMSWERRQCSWEEQQWPQASSGSQQSPNQWVCSRKNIGIHTGYYKNSWAGTLTKKPS
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 LPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHP
: . :::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYMKESLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHP
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 ISVSTSEIQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISVSTSEIQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQE
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 LPKLMDLHGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPKLMDLHGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB7 LNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKH
280 290 300 310 320 330
470 480 490 500 510
pF1KB7 QRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
:::::::::::::::::::::::::::::::::::::::::::
XP_016 QRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
340 350 360 370
>>XP_016885307 (OMIM: 314997) PREDICTED: zinc finger pro (364 aa)
initn: 1969 init1: 1969 opt: 1979 Z-score: 1179.8 bits: 227.4 E(85289): 5.6e-59
Smith-Waterman score: 1979; 84.2% identity (90.0% similar) in 341 aa overlap (173-510:24-364)
150 160 170 180 190 200
pF1KB7 LGKEAVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTYRVLQEQLGW-NTHKETQPVYER
: :. . :. : .. . .: ..
XP_016 MSNRLWSWWNSCRGSLMEQRMRSQPMSWERRQCSWEEQQWPQASSGSQQSPNQ
10 20 30 40 50
210 220 230 240 250
pF1KB7 AVHDQQMLALSEQKRIKHWK--MASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKTL
: ... ... . : ...: : . :::::::::::::::::::::::::::
XP_016 WVCSRKNIGIHTGYYKNSWAGTLTKKPSLYMKESLLTFEDVAVYFSEEEWQLLNPLEKTL
60 70 80 90 100 110
260 270 280 290 300 310
pF1KB7 YNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGREN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNDVMQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGREN
120 130 140 150 160 170
320 330 340 350 360 370
pF1KB7 PGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSSD
180 190 200 210 220 230
380 390 400 410 420 430
pF1KB7 LIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTH
240 250 260 270 280 290
440 450 460 470 480 490
pF1KB7 QRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLH
300 310 320 330 340 350
500 510
pF1KB7 RRREACLVSPN
:::::::::::
XP_016 RRREACLVSPN
360
>>XP_016885309 (OMIM: 314997) PREDICTED: zinc finger pro (339 aa)
initn: 1969 init1: 1969 opt: 1977 Z-score: 1179.0 bits: 227.1 E(85289): 6.3e-59
Smith-Waterman score: 1977; 84.9% identity (90.8% similar) in 337 aa overlap (177-510:3-339)
150 160 170 180 190 200
pF1KB7 AVLLGGTAVAPGFKWKPAEPQPMGVFQKEYWNTYRVLQEQLGW-NTHKETQPVYERAVHD
:. . :. : .. . .: .. : .
XP_016 MSWERRQCSWEEQQWPQASSGSQQSPNQWVCS
10 20 30
210 220 230 240 250 260
pF1KB7 QQMLALSEQKRIKHWK--MASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDV
.. ... . : ...: : . :::::::::::::::::::::::::::::::
XP_016 RKNIGIHTGYYKNSWAGTLTKKPSLYMKESLLTFEDVAVYFSEEEWQLLNPLEKTLYNDV
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB7 MQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGRENPGDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQDIYETVISLGLKLKNDTGNDHPISVSTSEIQTSGCEVSKKTRMKIAQKTMGRENPGDT
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB7 HSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSSDLIKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSVQKWHRAFPRKKRKKPATCKQELPKLMDLHGKGPTGEKPFKCQECGKSFRVSSDLIKH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB7 HRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTHQRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRIHTGEKPYKCQQCDRRFRWSSDLNKHFMTHQGIKPYRCSWCGKSFSHNTNLHTHQRIH
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB7 TGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLHRRRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGEKPFKCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQKLHRRRE
280 290 300 310 320 330
510
pF1KB7 ACLVSPN
:::::::
XP_016 ACLVSPN
510 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:19:52 2016 done: Sat Nov 5 16:19:53 2016
Total Scan time: 9.970 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]