Result of FASTA (omim) for
pF1KB7809
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7809, 527 aa
1>>>pF1KB7809 527 - 527 aa - 527 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4694+/-0.000637; mu= 8.8517+/- 0.039
mean_var=293.7798+/-61.087, 0's: 0 Z-trim(114.3): 1993 B-trim: 122 in 1/52
Lambda= 0.074828
statistics sampled from 21745 (24011) to 21745 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.282), width: 16
Scan time: 9.620
The best scores are: opt bits E(85289)
XP_016862618 (OMIM: 194533) PREDICTED: zinc finger ( 527) 3640 407.7 4.5e-113
XP_016862620 (OMIM: 194533) PREDICTED: zinc finger ( 527) 3640 407.7 4.5e-113
XP_016862619 (OMIM: 194533) PREDICTED: zinc finger ( 527) 3640 407.7 4.5e-113
NP_003411 (OMIM: 194533) zinc finger protein 35 [H ( 527) 3640 407.7 4.5e-113
NP_001166303 (OMIM: 612429) zinc finger protein 30 ( 568) 1501 176.8 1.5e-43
NP_443092 (OMIM: 612429) zinc finger protein 300 i ( 604) 1501 176.9 1.6e-43
XP_011536004 (OMIM: 612429) PREDICTED: zinc finger ( 609) 1501 176.9 1.6e-43
NP_001166302 (OMIM: 612429) zinc finger protein 30 ( 620) 1501 176.9 1.6e-43
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 1494 176.2 2.8e-43
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 1494 176.2 2.8e-43
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 1494 176.2 2.8e-43
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 1494 176.2 2.8e-43
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 1494 176.2 2.8e-43
XP_011525582 (OMIM: 606740) PREDICTED: zinc finger ( 734) 1494 176.2 2.9e-43
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 1488 175.5 4.2e-43
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 1488 175.5 4.2e-43
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 1488 175.5 4.2e-43
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 1488 175.5 4.3e-43
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 1488 175.5 4.3e-43
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 1488 175.5 4.4e-43
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1488 175.5 4.4e-43
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1488 175.5 4.4e-43
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1488 175.5 4.4e-43
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 1488 175.5 4.4e-43
NP_694563 (OMIM: 194480) zinc finger protein 3 hom ( 502) 1481 174.6 6.3e-43
XP_016881869 (OMIM: 613904) PREDICTED: zinc finger ( 527) 1477 174.2 8.7e-43
NP_001317411 (OMIM: 613904) zinc finger protein 56 ( 527) 1477 174.2 8.7e-43
XP_016881871 (OMIM: 613904) PREDICTED: zinc finger ( 527) 1477 174.2 8.7e-43
XP_016881868 (OMIM: 613904) PREDICTED: zinc finger ( 527) 1477 174.2 8.7e-43
XP_016881867 (OMIM: 613904) PREDICTED: zinc finger ( 650) 1477 174.3 9.8e-43
NP_689697 (OMIM: 613904) zinc finger protein 569 i ( 686) 1477 174.4 1e-42
XP_016881866 (OMIM: 613904) PREDICTED: zinc finger ( 686) 1477 174.4 1e-42
XP_011524841 (OMIM: 613904) PREDICTED: zinc finger ( 686) 1477 174.4 1e-42
XP_016881865 (OMIM: 613904) PREDICTED: zinc finger ( 686) 1477 174.4 1e-42
XP_006723110 (OMIM: 613904) PREDICTED: zinc finger ( 710) 1477 174.4 1e-42
XP_006723109 (OMIM: 613904) PREDICTED: zinc finger ( 710) 1477 174.4 1e-42
XP_011524840 (OMIM: 613904) PREDICTED: zinc finger ( 710) 1477 174.4 1e-42
XP_006723111 (OMIM: 613904) PREDICTED: zinc finger ( 710) 1477 174.4 1e-42
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 1471 173.3 1.1e-42
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 1471 173.3 1.1e-42
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 1471 173.3 1.1e-42
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1471 173.3 1.1e-42
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 1461 172.4 2.6e-42
NP_085137 (OMIM: 611703) zinc finger protein 436 [ ( 470) 1461 172.4 2.7e-42
>>XP_016862618 (OMIM: 194533) PREDICTED: zinc finger pro (527 aa)
initn: 3640 init1: 3640 opt: 3640 Z-score: 2151.1 bits: 407.7 E(85289): 4.5e-113
Smith-Waterman score: 3640; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KB7 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
430 440 450 460 470 480
490 500 510 520
pF1KB7 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
490 500 510 520
>>XP_016862620 (OMIM: 194533) PREDICTED: zinc finger pro (527 aa)
initn: 3640 init1: 3640 opt: 3640 Z-score: 2151.1 bits: 407.7 E(85289): 4.5e-113
Smith-Waterman score: 3640; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KB7 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
430 440 450 460 470 480
490 500 510 520
pF1KB7 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
490 500 510 520
>>XP_016862619 (OMIM: 194533) PREDICTED: zinc finger pro (527 aa)
initn: 3640 init1: 3640 opt: 3640 Z-score: 2151.1 bits: 407.7 E(85289): 4.5e-113
Smith-Waterman score: 3640; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KB7 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
430 440 450 460 470 480
490 500 510 520
pF1KB7 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
490 500 510 520
>>NP_003411 (OMIM: 194533) zinc finger protein 35 [Homo (527 aa)
initn: 3640 init1: 3640 opt: 3640 Z-score: 2151.1 bits: 407.7 E(85289): 4.5e-113
Smith-Waterman score: 3640; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KB7 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG
430 440 450 460 470 480
490 500 510 520
pF1KB7 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
:::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE
490 500 510 520
>>NP_001166303 (OMIM: 612429) zinc finger protein 300 is (568 aa)
initn: 4149 init1: 1469 opt: 1501 Z-score: 902.8 bits: 176.8 E(85289): 1.5e-43
Smith-Waterman score: 1501; 58.8% identity (81.6% similar) in 337 aa overlap (190-526:229-565)
160 170 180 190 200 210
pF1KB7 NMLKRQRIKREKKDFRQVIVNDCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQ
.:.. : : .. .: . . . . :.
NP_001 HNGVIPFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB7 KPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYV
::. :..:::.::.. .:::::: ::::::..: :::::: :...:..:::.:::.:::
NP_001 KPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYE
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB7 CSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNEC
::.:::::.:.: : .::.::. :: ..: :: :::: .::: :...: :: :::.::
NP_001 CSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTEC
320 330 340 350 360 370
340 350 360 370 380 390
pF1KB7 GKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAF
::.: ..:.::.:.::::::::. : .: .::.....::.:: ::::::::: ::::.:
NP_001 GKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTF
380 390 400 410 420 430
400 410 420 430 440 450
pF1KB7 SCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSS
: :.::.::: ::.:::: :::::::: : : :: :::::.:. ::.:.::::::. .:
NP_001 SRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKS
440 450 460 470 480 490
460 470 480 490 500 510
pF1KB7 YLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMR
.: :::::.::::: : :::::: :.:.:..::: ::::.::.: :: :::..:.:
NP_001 HLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTV
500 510 520 530 540 550
520
pF1KB7 HHRTHLVE
:.: : :
NP_001 HQRIHTVVKS
560
>>NP_443092 (OMIM: 612429) zinc finger protein 300 isofo (604 aa)
initn: 4149 init1: 1469 opt: 1501 Z-score: 902.5 bits: 176.9 E(85289): 1.6e-43
Smith-Waterman score: 1501; 58.8% identity (81.6% similar) in 337 aa overlap (190-526:265-601)
160 170 180 190 200 210
pF1KB7 NMLKRQRIKREKKDFRQVIVNDCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQ
.:.. : : .. .: . . . . :.
NP_443 HNGVIPFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGK
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB7 KPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYV
::. :..:::.::.. .:::::: ::::::..: :::::: :...:..:::.:::.:::
NP_443 KPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYE
300 310 320 330 340 350
280 290 300 310 320 330
pF1KB7 CSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNEC
::.:::::.:.: : .::.::. :: ..: :: :::: .::: :...: :: :::.::
NP_443 CSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTEC
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB7 GKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAF
::.: ..:.::.:.::::::::. : .: .::.....::.:: ::::::::: ::::.:
NP_443 GKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTF
420 430 440 450 460 470
400 410 420 430 440 450
pF1KB7 SCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSS
: :.::.::: ::.:::: :::::::: : : :: :::::.:. ::.:.::::::. .:
NP_443 SRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKS
480 490 500 510 520 530
460 470 480 490 500 510
pF1KB7 YLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMR
.: :::::.::::: : :::::: :.:.:..::: ::::.::.: :: :::..:.:
NP_443 HLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTV
540 550 560 570 580 590
520
pF1KB7 HHRTHLVE
:.: : :
NP_443 HQRIHTVVKS
600
>>XP_011536004 (OMIM: 612429) PREDICTED: zinc finger pro (609 aa)
initn: 4149 init1: 1469 opt: 1501 Z-score: 902.5 bits: 176.9 E(85289): 1.6e-43
Smith-Waterman score: 1501; 58.8% identity (81.6% similar) in 337 aa overlap (190-526:270-606)
160 170 180 190 200 210
pF1KB7 NMLKRQRIKREKKDFRQVIVNDCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQ
.:.. : : .. .: . . . . :.
XP_011 HNGVIPFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGK
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB7 KPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYV
::. :..:::.::.. .:::::: ::::::..: :::::: :...:..:::.:::.:::
XP_011 KPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYE
300 310 320 330 340 350
280 290 300 310 320 330
pF1KB7 CSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNEC
::.:::::.:.: : .::.::. :: ..: :: :::: .::: :...: :: :::.::
XP_011 CSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTEC
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB7 GKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAF
::.: ..:.::.:.::::::::. : .: .::.....::.:: ::::::::: ::::.:
XP_011 GKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTF
420 430 440 450 460 470
400 410 420 430 440 450
pF1KB7 SCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSS
: :.::.::: ::.:::: :::::::: : : :: :::::.:. ::.:.::::::. .:
XP_011 SRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKS
480 490 500 510 520 530
460 470 480 490 500 510
pF1KB7 YLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMR
.: :::::.::::: : :::::: :.:.:..::: ::::.::.: :: :::..:.:
XP_011 HLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTV
540 550 560 570 580 590
520
pF1KB7 HHRTHLVE
:.: : :
XP_011 HQRIHTVVKS
600
>>NP_001166302 (OMIM: 612429) zinc finger protein 300 is (620 aa)
initn: 4149 init1: 1469 opt: 1501 Z-score: 902.4 bits: 176.9 E(85289): 1.6e-43
Smith-Waterman score: 1501; 58.8% identity (81.6% similar) in 337 aa overlap (190-526:281-617)
160 170 180 190 200 210
pF1KB7 NMLKRQRIKREKKDFRQVIVNDCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQ
.:.. : : .. .: . . . . :.
NP_001 HNGVIPFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGK
260 270 280 290 300 310
220 230 240 250 260 270
pF1KB7 KPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYV
::. :..:::.::.. .:::::: ::::::..: :::::: :...:..:::.:::.:::
NP_001 KPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYE
320 330 340 350 360 370
280 290 300 310 320 330
pF1KB7 CSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNEC
::.:::::.:.: : .::.::. :: ..: :: :::: .::: :...: :: :::.::
NP_001 CSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTEC
380 390 400 410 420 430
340 350 360 370 380 390
pF1KB7 GKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAF
::.: ..:.::.:.::::::::. : .: .::.....::.:: ::::::::: ::::.:
NP_001 GKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTF
440 450 460 470 480 490
400 410 420 430 440 450
pF1KB7 SCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSS
: :.::.::: ::.:::: :::::::: : : :: :::::.:. ::.:.::::::. .:
NP_001 SRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKS
500 510 520 530 540 550
460 470 480 490 500 510
pF1KB7 YLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMR
.: :::::.::::: : :::::: :.:.:..::: ::::.::.: :: :::..:.:
NP_001 HLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTV
560 570 580 590 600 610
520
pF1KB7 HHRTHLVE
:.: : :
NP_001 HQRIHTVVKS
620
>>NP_001278562 (OMIM: 606740) zinc finger protein 180 is (665 aa)
initn: 2904 init1: 1470 opt: 1494 Z-score: 898.0 bits: 176.2 E(85289): 2.8e-43
Smith-Waterman score: 1518; 51.8% identity (77.0% similar) in 400 aa overlap (135-527:260-659)
110 120 130 140 150 160
pF1KB7 THGTMNFLGAETKNLQLLVPKTEICEEAEKPLIISERIQKADP--QGPELGEACE-KGNM
:: : :.:. . . : :.. . : .
NP_001 SIHLIQFTRTQTKDKSYGFSDRIQSFCHGTPLHIHEKIHGGGKTFDFKECGQVLNPKISH
230 240 250 260 270 280
170 180 190 200 210
pF1KB7 LKRQRIKREKKDFR-QVIVNDCHLPESFK---EEENQKCKKSGGKYSLNSGAVKNPKTQL
..::: :..... . .. : .... ::. .:.. : ..: .: : . .:.
NP_001 NEQQRIPFEESQYKCSETSHSSSLTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQRTHT
290 300 310 320 330 340
220 230 240 250 260 270
pF1KB7 GQKPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKP
:.::. :: :::.::.:..:: ::: ::::::..:..:::.: :: :::::: :::.::
NP_001 GEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKP
350 360 370 380 390 400
280 290 300 310 320 330
pF1KB7 YVCSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECN
: :..:::.: :: .: .::. :. :: ..::.: :.: : .: ::..: :: ::::
NP_001 YECNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECN
410 420 430 440 450 460
340 350 360 370 380 390
pF1KB7 ECGKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGK
.:::.:..: .:..::: ::::::: ::.:::.:. :..:..:::.:::::::::.::::
NP_001 QCGKSFSQSYKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGK
470 480 490 500 510 520
400 410 420 430 440 450
pF1KB7 AFSCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTC
.:. :::..::::::.::::.:..:::.::: :.:::: :.:. :: :..:::.:
NP_001 SFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQ
530 540 550 560 570 580
460 470 480 490 500 510
pF1KB7 SSYLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHL
:: : ::: :.::::. ::.:::.: . : :::::::::::. : .:: :::.. .:
NP_001 SSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRTHTGEKPFTCIQCGKAFINSYKL
590 600 610 620 630 640
520
pF1KB7 MRHHRTHLVE
.::. :: :
NP_001 IRHQATHTEEKLYECN
650 660
>>NP_001265438 (OMIM: 606740) zinc finger protein 180 is (665 aa)
initn: 2904 init1: 1470 opt: 1494 Z-score: 898.0 bits: 176.2 E(85289): 2.8e-43
Smith-Waterman score: 1518; 51.8% identity (77.0% similar) in 400 aa overlap (135-527:260-659)
110 120 130 140 150 160
pF1KB7 THGTMNFLGAETKNLQLLVPKTEICEEAEKPLIISERIQKADP--QGPELGEACE-KGNM
:: : :.:. . . : :.. . : .
NP_001 SIHLIQFTRTQTKDKSYGFSDRIQSFCHGTPLHIHEKIHGGGKTFDFKECGQVLNPKISH
230 240 250 260 270 280
170 180 190 200 210
pF1KB7 LKRQRIKREKKDFR-QVIVNDCHLPESFK---EEENQKCKKSGGKYSLNSGAVKNPKTQL
..::: :..... . .. : .... ::. .:.. : ..: .: : . .:.
NP_001 NEQQRIPFEESQYKCSETSHSSSLTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQRTHT
290 300 310 320 330 340
220 230 240 250 260 270
pF1KB7 GQKPFTCSVCGKGFSQSANLVVHQRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKP
:.::. :: :::.::.:..:: ::: ::::::..:..:::.: :: :::::: :::.::
NP_001 GEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKP
350 360 370 380 390 400
280 290 300 310 320 330
pF1KB7 YVCSKCGKAFTQSSNLTVHQKIHSLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECN
: :..:::.: :: .: .::. :. :: ..::.: :.: : .: ::..: :: ::::
NP_001 YECNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECN
410 420 430 440 450 460
340 350 360 370 380 390
pF1KB7 ECGKTFTRSSNLIVHQRIHTGEKPFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGK
.:::.:..: .:..::: ::::::: ::.:::.:. :..:..:::.:::::::::.::::
NP_001 QCGKSFSQSYKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGK
470 480 490 500 510 520
400 410 420 430 440 450
pF1KB7 AFSCFSHLIVHQRIHTAEKPYDCSECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTC
.:. :::..::::::.::::.:..:::.::: :.:::: :.:. :: :..:::.:
NP_001 SFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQ
530 540 550 560 570 580
460 470 480 490 500 510
pF1KB7 SSYLLIHQRIHNGEKPYTCNECGKAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHL
:: : ::: :.::::. ::.:::.: . : :::::::::::. : .:: :::.. .:
NP_001 SSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRTHTGEKPFTCIQCGKAFINSYKL
590 600 610 620 630 640
520
pF1KB7 MRHHRTHLVE
.::. :: :
NP_001 IRHQATHTEEKLYECN
650 660
527 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:32:52 2016 done: Sat Nov 5 18:32:53 2016
Total Scan time: 9.620 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]