Result of FASTA (omim) for
pF1KB7811
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7811, 529 aa
1>>>pF1KB7811 529 - 529 aa - 529 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2622+/-0.000339; mu= -9.4452+/- 0.021
mean_var=281.1587+/-58.194, 0's: 0 Z-trim(123.2): 12 B-trim: 51 in 1/57
Lambda= 0.076489
statistics sampled from 42611 (42623) to 42611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.794), E-opt: 0.2 (0.5), width: 16
Scan time: 12.380
The best scores are: opt bits E(85289)
NP_005517 (OMIM: 140580) heat shock factor protein ( 529) 3512 400.7 5.6e-111
XP_016868866 (OMIM: 140580) PREDICTED: heat shock ( 489) 3065 351.4 3.7e-96
XP_005272373 (OMIM: 140580) PREDICTED: heat shock ( 517) 2531 292.5 2.1e-78
XP_005272372 (OMIM: 140580) PREDICTED: heat shock ( 557) 2531 292.5 2.3e-78
XP_005272374 (OMIM: 140580) PREDICTED: heat shock ( 310) 1909 223.7 6.3e-58
XP_011515306 (OMIM: 140580) PREDICTED: heat shock ( 346) 1127 137.5 6.5e-32
XP_011515308 (OMIM: 140580) PREDICTED: heat shock ( 272) 1041 127.9 3.8e-29
NP_001035757 (OMIM: 116800,602438) heat shock fact ( 492) 925 115.2 4.5e-25
NP_001529 (OMIM: 116800,602438) heat shock factor ( 462) 890 111.4 6.3e-24
NP_001129036 (OMIM: 140581) heat shock factor prot ( 518) 837 105.5 4e-22
NP_004497 (OMIM: 140581) heat shock factor protein ( 536) 837 105.5 4.1e-22
NP_001230023 (OMIM: 140581) heat shock factor prot ( 230) 825 104.0 4.9e-22
>>NP_005517 (OMIM: 140580) heat shock factor protein 1 [ (529 aa)
initn: 3512 init1: 3512 opt: 3512 Z-score: 2113.4 bits: 400.7 E(85289): 5.6e-111
Smith-Waterman score: 3512; 100.0% identity (100.0% similar) in 529 aa overlap (1-529:1-529)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLDLFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLDLFSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLLDPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLLDPGS
430 440 450 460 470 480
490 500 510 520
pF1KB7 VDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
490 500 510 520
>>XP_016868866 (OMIM: 140580) PREDICTED: heat shock fact (489 aa)
initn: 3106 init1: 3060 opt: 3065 Z-score: 1847.4 bits: 351.4 E(85289): 3.7e-96
Smith-Waterman score: 3065; 98.3% identity (98.7% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 PPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLDLFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLDLFSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 SVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLLDPGS
:::::::::::::::::::::::::::::::::::::::::. : .: :
XP_016 SVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSAGALHSAAAVPAGPRLRGH
430 440 450 460 470 480
490 500 510 520
pF1KB7 VDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
XP_016 REQRPAGAV
>>XP_005272373 (OMIM: 140580) PREDICTED: heat shock fact (517 aa)
initn: 3040 init1: 2531 opt: 2531 Z-score: 1528.5 bits: 292.5 E(85289): 2.1e-78
Smith-Waterman score: 2993; 92.6% identity (93.2% similar) in 500 aa overlap (1-472:1-500)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
310 320 330 340 350 360
370 380 390
pF1KB7 PPSPPPTSTPEKCLSVACLDK----------------------------NELSDHLDAMD
::::::::::::::::::::. :::::::::::
XP_005 PPSPPPTSTPEKCLSVACLDNLARTPQMSRVARLFPCPSSSPHGQVQPGNELSDHLDAMD
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 SNLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SNLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 EAENSSPDSGKQLVHYTAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTI
:::::::::. : .: :
XP_005 EAENSSPDSAGALHSAAAVPAGPRLRGHREQRPAGAV
490 500 510
>>XP_005272372 (OMIM: 140580) PREDICTED: heat shock fact (557 aa)
initn: 3492 init1: 2531 opt: 2531 Z-score: 1528.0 bits: 292.5 E(85289): 2.3e-78
Smith-Waterman score: 3440; 94.8% identity (95.0% similar) in 557 aa overlap (1-529:1-557)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
310 320 330 340 350 360
370 380 390
pF1KB7 PPSPPPTSTPEKCLSVACLDK----------------------------NELSDHLDAMD
::::::::::::::::::::. :::::::::::
XP_005 PPSPPPTSTPEKCLSVACLDNLARTPQMSRVARLFPCPSSSPHGQVQPGNELSDHLDAMD
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 SNLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SNLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 EAENSSPDSGKQLVHYTAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAENSSPDSGKQLVHYTAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTI
490 500 510 520 530 540
520
pF1KB7 SLLTGSEPPKAKDPTVS
:::::::::::::::::
XP_005 SLLTGSEPPKAKDPTVS
550
>>XP_005272374 (OMIM: 140580) PREDICTED: heat shock fact (310 aa)
initn: 1909 init1: 1909 opt: 1909 Z-score: 1161.0 bits: 223.7 E(85289): 6.3e-58
Smith-Waterman score: 1909; 99.7% identity (99.7% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEE
:::::::::::::::::::::::::::::::::::::::::::::: :
XP_005 SAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDESPHGRQGPHGHRGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGR
XP_005 ASLPPAHLHP
310
>>XP_011515306 (OMIM: 140580) PREDICTED: heat shock fact (346 aa)
initn: 2088 init1: 1127 opt: 1127 Z-score: 693.9 bits: 137.5 E(85289): 6.5e-32
Smith-Waterman score: 2036; 91.6% identity (91.9% similar) in 346 aa overlap (212-529:1-346)
190 200 210 220 230 240
pF1KB7 QQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPYS
::::::::::::::::::::::::::::::
XP_011 MLNDSGSAHSMPKYSRQFSLEHVHGSGPYS
10 20 30
250 260 270 280 290 300
pF1KB7 APSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEEP
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB7 PSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRP
100 110 120 130 140 150
370 380 390
pF1KB7 PSPPPTSTPEKCLSVACLDK----------------------------NELSDHLDAMDS
:::::::::::::::::::. ::::::::::::
XP_011 PSPPPTSTPEKCLSVACLDNLARTPQMSRVARLFPCPSSSPHGQVQPGNELSDHLDAMDS
160 170 180 190 200 210
400 410 420 430 440 450
pF1KB7 NLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLDNLQTMLSSHGFSVDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPE
220 230 240 250 260 270
460 470 480 490 500 510
pF1KB7 AENSSPDSGKQLVHYTAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AENSSPDSGKQLVHYTAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTIS
280 290 300 310 320 330
520
pF1KB7 LLTGSEPPKAKDPTVS
::::::::::::::::
XP_011 LLTGSEPPKAKDPTVS
340
>>XP_011515308 (OMIM: 140580) PREDICTED: heat shock fact (272 aa)
initn: 1592 init1: 975 opt: 1041 Z-score: 644.2 bits: 127.9 E(85289): 3.8e-29
Smith-Waterman score: 1540; 89.3% identity (89.7% similar) in 271 aa overlap (287-529:2-272)
260 270 280 290 300 310
pF1KB7 AVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRVKEEPPSPPQSPRVEEASPG
::::::::::::::::::::::::::::::
XP_011 MRPLSSSPLVRVKEEPPSPPQSPRVEEASPG
10 20 30
320 330 340 350 360 370
pF1KB7 RPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRPPSPPPTSTPEKCLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRPPSPPPTSTPEKCLSV
40 50 60 70 80 90
380 390 400
pF1KB7 ACLDK----------------------------NELSDHLDAMDSNLDNLQTMLSSHGFS
::::. :::::::::::::::::::::::::::
XP_011 ACLDNLARTPQMSRVARLFPCPSSSPHGQVQPGNELSDHLDAMDSNLDNLQTMLSSHGFS
100 110 120 130 140 150
410 420 430 440 450 460
pF1KB7 VDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDTSALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHY
160 170 180 190 200 210
470 480 490 500 510 520
pF1KB7 TAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAQPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTV
220 230 240 250 260 270
pF1KB7 S
:
XP_011 S
>>NP_001035757 (OMIM: 116800,602438) heat shock factor p (492 aa)
initn: 738 init1: 587 opt: 925 Z-score: 571.1 bits: 115.2 E(85289): 4.5e-25
Smith-Waterman score: 1001; 41.2% identity (62.8% similar) in 473 aa overlap (7-475:9-453)
10 20 30 40 50
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
NP_001 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
NP_001 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
NP_001 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
NP_001 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 GPYSAPSPAYSSSSLYAPDAVASSGPIISDITELAPASPMASPGGSIDERPLSSSPLVRV
:: :: .. .: . ::::::: : .:. . . : : : . :. .
NP_001 DPYFIQSPLPETNLGLSPHR--ARGPIISDIPEDSPSPEGTRLSPSSDGR--REKGLALL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 KEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAP-ASVTALTDARGHTD
:::: :::: . . :.:. : . : : : : :. ...: .
NP_001 KEEP-----------ASPGGDGEAGLALAPNEC-DFCVTAPPPLPVAVVQAILEGKGSFS
300 310 320 330 340
360 370 380 390 400 410
pF1KB7 TEGRPPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNL--QTMLSSHGFSVDTSAL
:: : .. :: :.. :. :.. : . ..: .:. ::. ..
NP_001 PEG----PRNAQQPEPGDPREIPDRGPLG--LESGDRSPESLLPPMLLQPPQESVEPAGP
350 360 370 380 390
420 430 440 450 460 470
pF1KB7 LDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLF
::...::. . .: ::: :. .: :. . :. .::. ::. . ::.
NP_001 LDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKD--PTLGAPLL
400 410 420 430 440 450
480 490 500 510 520
pF1KB7 LLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
:
NP_001 LDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
460 470 480 490
>>NP_001529 (OMIM: 116800,602438) heat shock factor prot (462 aa)
initn: 728 init1: 587 opt: 890 Z-score: 550.6 bits: 111.4 E(85289): 6.3e-24
Smith-Waterman score: 902; 39.1% identity (58.2% similar) in 471 aa overlap (7-475:9-423)
10 20 30 40 50
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP
: ::: ::::: :::.::.:: :: :: :::::.:: : ::..:::::::
NP_001 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 KYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK
.::::.:::::::::::::::::: ::::::..:::: .::::: :.::.::::: ..::
NP_001 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQK
: . :...: . : ... .:: .:: ..: :: ...: ....:: :::::..:::.
NP_001 VPA---LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 HAQQQKVVNKLIQFLISLVQSN-RILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGS
:.::..:..:::: :.. .:.. : :::. ::: : ::. : : . .
NP_001 HGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNTCPLPGALLQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 GPYSAPSPAYSSSSLYAPDAVASSGP-IISDITELAPASPMASPGGSIDERPLSSSPLVR
:: ::. : : :.: .:: :..: :. .:: : :
NP_001 DPYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPG---------FLPPVM
240 250 260 270 280
300 310 320 330 340 350
pF1KB7 VKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTD
. :: : :. :. : .:: .. ..: :.. . : ::
NP_001 AGAPPPLPVAV--VQAILEGKGS-----FSP----EGPRNAQQPEPGDPREIPD-RGPLG
290 300 310 320 330
360 370 380 390 400 410
pF1KB7 TEGRPPSPPPTSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLD
:. :: : .:. ::. .. ::
NP_001 LESGDRSPESLLPP-----------------------------MLLQPPQESVEPAGPLD
340 350 360
420 430 440 450 460 470
pF1KB7 LFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLL
...::. . .: ::: :. .: :. . :. .::. ::. . ::.:
NP_001 VLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKD--PTLGAPLLLD
370 380 390 400 410 420
480 490 500 510 520
pF1KB7 DPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
NP_001 VQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
430 440 450 460
>>NP_001129036 (OMIM: 140581) heat shock factor protein (518 aa)
initn: 1001 init1: 493 opt: 837 Z-score: 518.2 bits: 105.5 E(85289): 4e-22
Smith-Waterman score: 957; 39.4% identity (65.2% similar) in 477 aa overlap (13-480:5-439)
10 20 30 40 50 60
pF1KB7 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
:::::::.:::::: . :. .: :: .:.:: :.:. .::::.::::
NP_001 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKY
10 20 30 40 50
70 80 90 100 110
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDD-TEFQHPCFLRGQEQLLENIKRKV
::::::::::::::::::::::::..: .:: ::: .::::: : .::..:::::::::
NP_001 FKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKRKV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 TSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKH
.: : :. ::::...::.....: .. ::: ..:.: .: :::.::.::. :: ::
NP_001 SSS---KPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKH
120 130 140 150 160
180 190 200 210 220 230
pF1KB7 AQQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGP
::::.:. :..::...:::.:.....::: ::.:: .:. . : : ... .
NP_001 AQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQK---KNLFQHIVKEPTDNHH
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 YSAPSPAYSSSSLYAPDAVASSGPIISDIT------ELAPASPMASPGGSIDERPLSSSP
...: .: . : :. :: :.: : :. : .. : :. :
NP_001 HKVP---HSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYP
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 LVRVKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARG
. . :. .: .. . ..:. ..: : . :. : : .:.. :. . .
NP_001 DIVIVEDDNEDEYAPVIQSGEQNEPAR-ESLSSGS---DG----SSPLMSSAVQLNGSSS
290 300 310 320 330
360 370 380 390 400 410
pF1KB7 HTDTEGRPPSPPPTSTPEKCLS--VACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDT
: : :.. .. :. . : : :: :.::..: .:...:.:::.. ::.:
NP_001 LT-------SEDPVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQAMLSGRQFSIDP
340 350 360 370 380
420 430 440 450 460 470
pF1KB7 SALLDLFSPSVTVPDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQ
. :.: . . :... .. . .: : : . :.:: :::..:::
NP_001 DLLVDSENKG----------LETTKNNVVQPVS--EEGRKSK---SKPD--KQLIQYTAF
390 400 410 420 430
480 490 500 510 520
pF1KB7 PLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
::. . :.
NP_001 PLLAFLDGNPASSVEQASTTASSEVLSSVDKPIEVDELLDSSLDPEPTQSKLVRLEPLTE
440 450 460 470 480 490
529 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:39:32 2016 done: Fri Nov 4 22:39:34 2016
Total Scan time: 12.380 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]