Result of FASTA (omim) for
pF1KB7820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7820, 599 aa
1>>>pF1KB7820 599 - 599 aa - 599 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.6109+/-0.000354; mu= -0.3563+/- 0.022
mean_var=225.3314+/-46.635, 0's: 0 Z-trim(120.9): 36 B-trim: 0 in 0/59
Lambda= 0.085440
statistics sampled from 36808 (36850) to 36808 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.432), width: 16
Scan time: 11.890
The best scores are: opt bits E(85289)
NP_444511 (OMIM: 300608) dachshund homolog 2 isofo ( 599) 3929 497.3 6.2e-140
XP_011529150 (OMIM: 300608) PREDICTED: dachshund h ( 584) 3817 483.5 8.7e-136
XP_011529149 (OMIM: 300608) PREDICTED: dachshund h ( 594) 3131 398.9 2.5e-110
XP_011529148 (OMIM: 300608) PREDICTED: dachshund h ( 609) 3131 398.9 2.6e-110
NP_001132987 (OMIM: 300608) dachshund homolog 2 is ( 432) 2810 359.3 1.6e-98
XP_016884744 (OMIM: 300608) PREDICTED: dachshund h ( 586) 2761 353.3 1.3e-96
NP_001132986 (OMIM: 300608) dachshund homolog 2 is ( 571) 2649 339.5 1.9e-92
XP_016884745 (OMIM: 300608) PREDICTED: dachshund h ( 571) 2649 339.5 1.9e-92
XP_016884743 (OMIM: 300608) PREDICTED: dachshund h ( 596) 1963 254.9 5.5e-67
XP_011533242 (OMIM: 603803) PREDICTED: dachshund h ( 614) 1367 181.5 7.4e-45
XP_011533241 (OMIM: 603803) PREDICTED: dachshund h ( 758) 1367 181.5 8.8e-45
NP_542937 (OMIM: 603803) dachshund homolog 1 isofo ( 706) 943 129.2 4.5e-29
XP_016875885 (OMIM: 603803) PREDICTED: dachshund h ( 417) 768 107.5 9e-23
XP_011533244 (OMIM: 603803) PREDICTED: dachshund h ( 365) 754 105.8 2.7e-22
XP_011533243 (OMIM: 603803) PREDICTED: dachshund h ( 379) 705 99.7 1.8e-20
NP_542938 (OMIM: 603803) dachshund homolog 1 isofo ( 558) 688 97.8 1.1e-19
NP_004383 (OMIM: 603803) dachshund homolog 1 isofo ( 504) 687 97.6 1.1e-19
>>NP_444511 (OMIM: 300608) dachshund homolog 2 isoform a (599 aa)
initn: 3929 init1: 3929 opt: 3929 Z-score: 2633.2 bits: 497.3 E(85289): 6.2e-140
Smith-Waterman score: 3929; 100.0% identity (100.0% similar) in 599 aa overlap (1-599:1-599)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_444 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
550 560 570 580 590
>>XP_011529150 (OMIM: 300608) PREDICTED: dachshund homol (584 aa)
initn: 3817 init1: 3817 opt: 3817 Z-score: 2558.8 bits: 483.5 E(85289): 8.7e-136
Smith-Waterman score: 3817; 100.0% identity (100.0% similar) in 583 aa overlap (1-583:1-583)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQA
550 560 570 580
>>XP_011529149 (OMIM: 300608) PREDICTED: dachshund homol (594 aa)
initn: 3076 init1: 3076 opt: 3131 Z-score: 2101.7 bits: 398.9 E(85289): 2.5e-110
Smith-Waterman score: 3787; 98.3% identity (98.3% similar) in 593 aa overlap (1-583:1-593)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQ----------GLLKVAL
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQVNNISINKINGLLKVAL
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB7 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB7 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQA
550 560 570 580 590
pF1KB7 EMAQQLYSA
>>XP_011529148 (OMIM: 300608) PREDICTED: dachshund homol (609 aa)
initn: 3076 init1: 3076 opt: 3131 Z-score: 2101.5 bits: 398.9 E(85289): 2.6e-110
Smith-Waterman score: 3899; 98.4% identity (98.4% similar) in 609 aa overlap (1-599:1-609)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQ----------GLLKVAL
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQVNNISINKINGLLKVAL
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB7 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB7 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCL
550 560 570 580 590 600
pF1KB7 EMAQQLYSA
:::::::::
XP_011 EMAQQLYSA
>>NP_001132987 (OMIM: 300608) dachshund homolog 2 isofor (432 aa)
initn: 2810 init1: 2810 opt: 2810 Z-score: 1889.9 bits: 359.3 E(85289): 1.6e-98
Smith-Waterman score: 2810; 100.0% identity (100.0% similar) in 432 aa overlap (168-599:1-432)
140 150 160 170 180 190
pF1KB7 QPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPGRPPKRSLGVLQENARLL
::::::::::::::::::::::::::::::
NP_001 MTRKQAVNSSRPGRPPKRSLGVLQENARLL
10 20 30
200 210 220 230 240 250
pF1KB7 THAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNT
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB7 GGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFM
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB7 MMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSP
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB7 APSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQA
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB7 LPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREI
280 290 300 310 320 330
500 510 520 530 540 550
pF1KB7 RENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGL
340 350 360 370 380 390
560 570 580 590
pF1KB7 RMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
::::::::::::::::::::::::::::::::::::::::::
NP_001 RMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
400 410 420 430
>>XP_016884744 (OMIM: 300608) PREDICTED: dachshund homol (586 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 1855.3 bits: 353.3 E(85289): 1.3e-96
Smith-Waterman score: 3810; 97.8% identity (97.8% similar) in 599 aa overlap (1-599:1-586)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
:::::::::::::::::::::::::::::::::::::::::: :::::
XP_016 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNA-------------SSRPG
130 140 150 160
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
470 480 490 500 510 520
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
530 540 550 560 570 580
>>NP_001132986 (OMIM: 300608) dachshund homolog 2 isofor (571 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 1780.8 bits: 339.5 E(85289): 1.9e-92
Smith-Waterman score: 3698; 97.8% identity (97.8% similar) in 583 aa overlap (1-583:1-570)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
:::::::::::::::::::::::::::::::::::::::::: :::::
NP_001 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNA-------------SSRPG
130 140 150 160
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
470 480 490 500 510 520
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::
NP_001 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQA
530 540 550 560 570
>>XP_016884745 (OMIM: 300608) PREDICTED: dachshund homol (571 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 1780.8 bits: 339.5 E(85289): 1.9e-92
Smith-Waterman score: 3698; 97.8% identity (97.8% similar) in 583 aa overlap (1-583:1-570)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
:::::::::::::::::::::::::::::::::::::::::: :::::
XP_016 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNA-------------SSRPG
130 140 150 160
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
470 480 490 500 510 520
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::
XP_016 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQA
530 540 550 560 570
>>XP_016884743 (OMIM: 300608) PREDICTED: dachshund homol (596 aa)
initn: 2110 init1: 1908 opt: 1963 Z-score: 1323.6 bits: 254.9 E(85289): 5.5e-67
Smith-Waterman score: 3780; 96.2% identity (96.2% similar) in 609 aa overlap (1-599:1-596)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
:::::::::::::::::::::::::::::::::::::::::: :::::
XP_016 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNA-------------SSRPG
130 140 150 160
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
350 360 370 380 390 400
430 440 450 460 470
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQ----------GLLKVAL
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQVNNISINKINGLLKVAL
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB7 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQ
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB7 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCL
530 540 550 560 570 580
pF1KB7 EMAQQLYSA
:::::::::
XP_016 EMAQQLYSA
590
>>XP_011533242 (OMIM: 603803) PREDICTED: dachshund homol (614 aa)
initn: 1400 init1: 593 opt: 1367 Z-score: 926.3 bits: 181.5 E(85289): 7.4e-45
Smith-Waterman score: 1501; 55.0% identity (74.8% similar) in 453 aa overlap (4-445:148-554)
10 20 30
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPR
:.: :..::... : . ..:.::::
XP_011 GGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS
120 130 140 150 160 170
40 50 60 70 80 90
pF1KB7 EPPRLTPNMINSFVVNNHSNSAGGGGRGNTNTNECRMVDMHGMKVASFLMDGQELICLPQ
: . ::. .:::.:::..: ::::: ..: :::::::
XP_011 -PVENTPQ-----------------------NNECKMVDLRGAKVASFTVEGCELICLPQ
180 190 200 210
100 110 120 130 140 150
pF1KB7 VFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFE
.::::::::::::::::::::::.:.::::.:::::::::::::::::::::::.:::::
XP_011 AFDLFLKHLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFE
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB7 TLFTDCTNARRKRQMTRKQAVNSSRPGRPPKRSLGVLQ-ENARLLTHAVPGLLSPGLITP
::..::::: ::::::::::. .: . ::.... :.::::.:::.: :
XP_011 TLYNDCTNA-------------SSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPP
280 290 300 310 320
220 230 240 250 260
pF1KB7 TGITAAA----------MAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNTGGSES
::.:::: .:::::..:.:: ::.. .....:.:..:: :.::..:.:..
XP_011 TGLTAAAAAAAAATNAAIAEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGSSDG
330 340 350 360 370 380
270 280 290 300 310 320
pF1KB7 SWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFMMMPHP
::::. . : . ::: .:.: . : .. . :: :::.::: : :.:::::::::
XP_011 SWDKETLPSS-PSQGPQASITHPRMPGARSLPLSHPLNHLQQSHLLPNGLELPFMMMPHP
390 400 410 420 430
330 340 350 360 370 380
pF1KB7 LLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSPAPSLE
:.:::::::::.:::.:::::.::::::::::..:: ::. :::::::.:.:::::::::
XP_011 LIPVSLPPASVTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLE
440 450 460 470 480 490
390 400 410 420 430 440
pF1KB7 ENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQALPAGF
:..::::. ::: ::::::::.. . .: ::. .. :. :. : . : .
XP_011 EGRRPGSHPSSHRSSSVSSSPARTESSSDR-------IPVHQNGLSMNQMLMGLS-PNVL
500 510 520 530 540 550
450 460 470 480 490 500
pF1KB7 PGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIRENLE
:::
XP_011 PGPKEGDLAGHDMGHESKRMHIEKVHIILTRIQLDFTKNTGLNMHKRLQCGMCADSSVSS
560 570 580 590 600 610
599 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:50:44 2016 done: Sat Nov 5 09:50:46 2016
Total Scan time: 11.890 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]