Result of FASTA (ccds) for
pF1KB7855
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7855, 551 aa
1>>>pF1KB7855 551 - 551 aa - 551 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.5322+/-0.00106; mu= -13.8528+/- 0.063
mean_var=411.1296+/-84.303, 0's: 0 Z-trim(115.4): 24 B-trim: 0 in 0/53
Lambda= 0.063254
statistics sampled from 15925 (15944) to 15925 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.49), width: 16
Scan time: 3.630
The best scores are: opt bits E(32554)
CCDS31609.1 RELA gene_id:5970|Hs108|chr11 ( 551) 3783 359.3 6.6e-99
CCDS44651.1 RELA gene_id:5970|Hs108|chr11 ( 548) 3747 356.1 6.5e-98
CCDS73322.1 RELA gene_id:5970|Hs108|chr11 ( 448) 2853 274.4 2e-73
CCDS74515.1 REL gene_id:5966|Hs108|chr2 ( 587) 1327 135.2 2.1e-31
CCDS1864.1 REL gene_id:5966|Hs108|chr2 ( 619) 1311 133.8 5.9e-31
CCDS46110.1 RELB gene_id:5971|Hs108|chr19 ( 579) 1142 118.3 2.5e-26
>>CCDS31609.1 RELA gene_id:5970|Hs108|chr11 (551 aa)
initn: 3783 init1: 3783 opt: 3783 Z-score: 1889.1 bits: 359.3 E(32554): 6.6e-99
Smith-Waterman score: 3783; 100.0% identity (100.0% similar) in 551 aa overlap (1-551:1-551)
10 20 30 40 50 60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
490 500 510 520 530 540
550
pF1KB7 DFSALLSQISS
:::::::::::
CCDS31 DFSALLSQISS
550
>>CCDS44651.1 RELA gene_id:5970|Hs108|chr11 (548 aa)
initn: 3749 init1: 2762 opt: 3747 Z-score: 1871.4 bits: 356.1 E(32554): 6.5e-98
Smith-Waterman score: 3747; 99.5% identity (99.5% similar) in 551 aa overlap (1-551:1-548)
10 20 30 40 50 60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS44 VKKRDLEQAISQRIQTNNNPFQ---EEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
130 140 150 160 170
190 200 210 220 230 240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
480 490 500 510 520 530
550
pF1KB7 DFSALLSQISS
:::::::::::
CCDS44 DFSALLSQISS
540
>>CCDS73322.1 RELA gene_id:5970|Hs108|chr11 (448 aa)
initn: 2987 init1: 2817 opt: 2853 Z-score: 1431.7 bits: 274.4 E(32554): 2e-73
Smith-Waterman score: 2885; 81.3% identity (81.3% similar) in 551 aa overlap (1-551:1-448)
10 20 30 40 50 60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
:::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQ---------------
370 380 390 400
430 440 450 460 470 480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
CCDS73 ------------------------------------------------------------
490 500 510 520 530 540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
::::::::::::::::::::::::::::::::
CCDS73 ----------------------------RPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
410 420 430
550
pF1KB7 DFSALLSQISS
:::::::::::
CCDS73 DFSALLSQISS
440
>>CCDS74515.1 REL gene_id:5966|Hs108|chr2 (587 aa)
initn: 1095 init1: 613 opt: 1327 Z-score: 677.5 bits: 135.2 E(32554): 2.1e-31
Smith-Waterman score: 1327; 46.9% identity (70.9% similar) in 461 aa overlap (16-465:5-461)
10 20 30 40 50 60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
: .::.::::::.:::::::::::::::::::::.:::...:.:.
CCDS74 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPS
10 20 30 40
70 80 90 100 110 120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
:.: .: : : :::.::::. :..::::.:::::::::.::::. .: ::::::.:
CCDS74 IQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRC
50 60 70 80 90 100
130 140 150 160 170
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDY---DLNAVRLCFQVTVRDPSGR-PLRLP
:::.....:: ::... :::.:: :.: .: :::.::::::: . : : ::
CCDS74 VKKKEVKEAIITRIKAGINPFNVP-EKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 PVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEAR
::.:.::.::::::::::.:::::.: :: ::::::::::::::.:::: :. :::.
CCDS74 PVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLNDWEAK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 GSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRH
: ::::::::::::::.:::: .. :: :.::::::::.:.:: :.:.:::: : .
CCDS74 GIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDTY
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 RIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQP---YPFTS
. :...: :... . . . : ::: .: . :. . . .
CCDS74 GNKAKKQKTTLLFQKLCQ-DHVNFPERPRPGLLGSIGEGRYFKKEPNLFSHDAVVREMPT
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB7 SLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQ-APAPVPV
..:. . .:. :. .:. ...:: : . .. :.: . .. :.. . .:
CCDS74 GVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPS
350 360 370 380 390 400
420 430 440 450 460
pF1KB7 LAPGPPQAVAPPAPKPTQAGEGTL---SEALLQLQFDDEDLGALLGNSTDPAVFTDLASV
. : : . :. . .:... . .. .. .. .. . : : : :: ....
CCDS74 NSQGIPPFLRIPVGNDLNASNACIYNNADDIVGMEASSMPSADLYGIS-DPNMLSNCSVN
410 420 430 440 450 460
470 480 490 500 510 520
pF1KB7 DNSEFQQLLNQGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLS
CCDS74 MMTTSSDSMGETDNPRLLSMNLENPSCNSVLDPRDLRQLHQMSSSSMSAGANSNTTVFVS
470 480 490 500 510 520
>>CCDS1864.1 REL gene_id:5966|Hs108|chr2 (619 aa)
initn: 1095 init1: 613 opt: 1311 Z-score: 669.2 bits: 133.8 E(32554): 5.9e-31
Smith-Waterman score: 1314; 50.0% identity (70.9% similar) in 426 aa overlap (16-427:5-421)
10 20 30 40 50 60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
: .::.::::::.:::::::::::::::::::::.:::...:.:.
CCDS18 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPS
10 20 30 40
70 80 90 100 110 120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
:.: .: : : :::.::::. :..::::.:::::::::.::::. .: ::::::.:
CCDS18 IQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRC
50 60 70 80 90 100
130 140 150 160 170
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDY---DLNAVRLCFQVTVRDPSGR-PLRLP
:::.....:: ::... :::.:: :.: .: :::.::::::: . : : ::
CCDS18 VKKKEVKEAIITRIKAGINPFNVP-EKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 PVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEAR
::.:.::.::::::::::.:::::.: :: ::::::::::::::.:::: :. :::.
CCDS18 PVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLNDWEAK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 GSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRH
: ::::::::::::::.:::: .. :: :.::::::::.:.:: :.:.:::: : .
CCDS18 GIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDTY
230 240 250 260 270 280
300 310 320 330 340
pF1KB7 RIEEKRKRTYETFKSIMKKSPFSG--PTDPR--------PPPRRIAVPSRSSASVPKPAP
. :...: :... . .: .: :: . . ... :. :
CCDS18 GNKAKKQKTTLLFQKLCQDHVETGFRHVDQDGLELLTSGDPPTLASQSAGITVNFPE-RP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB7 QPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQA
.: . : . . :.. .:. ... : : :: . :.:. .:. .
CCDS18 RPGLLGSIGEGRYFKKEPNL------FSHDAVVREMPTGVSSQAESYYPSPGPISSGLSH
350 360 370 380 390 400
410 420 430 440 450 460
pF1KB7 PAPVPVLAPGPPQAVAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDL
: . : . ..:: :.:.
CCDS18 HASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIPVGNDLNASNA
410 420 430 440 450 460
>>CCDS46110.1 RELB gene_id:5971|Hs108|chr19 (579 aa)
initn: 1080 init1: 736 opt: 1142 Z-score: 586.3 bits: 118.3 E(32554): 2.5e-26
Smith-Waterman score: 1142; 42.4% identity (68.4% similar) in 446 aa overlap (7-436:114-552)
10 20 30
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
:. :: :. . :.. : ::::::::::::
CCDS46 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
.::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: :::::
CCDS46 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD
: ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . :
CCDS46 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB7 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
.:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:..
CCDS46 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
270 280 290 300 310 320
220 230 240 250 260 270
pF1KB7 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :.
CCDS46 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
330 340 350 360 370 380
280 290 300 310 320
pF1KB7 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR
: .: :::. : ::: : . ...:::: . . ...: : . : :
CCDS46 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL
390 400 410 420 430 440
330 340 350 360 370 380
pF1KB7 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP
.:...:. :. :.: :....: .: . :.: .... : :. :
CCDS46 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP
450 460 470 480 490
390 400 410 420 430 440
pF1KB7 QVLPQAPAPAPAPAMVSALAQAPAPVPVLA--PGP-PQAV-APPAPKPTQAGEGTLSEAL
.. . ::: .::.. . . :.. ::: : .. . :: : ..: ..:
CCDS46 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN
500 510 520 530 540 550
450 460 470 480 490 500
pF1KB7 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI
CCDS46 MFPNHYREAAFGGGLLSPGPEAT
560 570
551 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:09:00 2016 done: Fri Nov 4 21:09:00 2016
Total Scan time: 3.630 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]