FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7868, 634 aa
  1>>>pF1KB7868 634 - 634 aa - 634 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.0902+/-0.000928; mu= -0.7748+/- 0.055
 mean_var=364.8896+/-84.811, 0's: 0 Z-trim(117.0): 624  B-trim: 898 in 1/50
 Lambda= 0.067142
 statistics sampled from 16868 (17723) to 16868 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.544), width:  16
 Scan time:  4.280

The best scores are:                                      opt bits E(32554)
CCDS4775.1 ZBTB22 gene_id:9278|Hs108|chr6          ( 634) 4348 435.3 1.2e-121


>>CCDS4775.1 ZBTB22 gene_id:9278|Hs108|chr6               (634 aa)
 initn: 4348 init1: 4348 opt: 4348  Z-score: 2297.3  bits: 435.3 E(32554): 1.2e-121
Smith-Waterman score: 4348; 99.8% identity (100.0% similar) in 634 aa overlap (1-634:1-634)

               10        20        30        40        50        60
pF1KB7 MEPSPLSPSGAALPLPLSLAPPPLPLPAAAVVHVSFPEVTSALLESLNQQRLQGQLCDVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MEPSPLSPSGAALPLPLSLAPPPLPLPAAAVVHVSFPEVTSALLESLNQQRLQGQLCDVS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 IRVQGREFRAHRAVLAASSPYFHDQVLLKGMTSISLPSVMDPGAFETVLASAYTGRLSMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IRVQGREFRAHRAVLAASSPYFHDQVLLKGMTSISLPSVMDPGAFETVLASAYTGRLSMA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 AADIVNFLTVGSVLQMWHIVDKCTELLREGRASATTTITTAAATSVTVPGAGVPSGSGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AADIVNFLTVGSVLQMWHIVDKCTELLREGRASATTTITTAAATSVTVPGAGVPSGSGGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 VAPATMGSARSHASSRASENQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGERRGGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VAPATMGSARSHASSRASENQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGERRGGGP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 VFPAPVVGSGGATSGKLLLEADELCDDGGDGRGAVVPGAGLRRPTYTPPSIMPQKHWVYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VFPAPVVGSGGATSGKLLLEADELCDDGGDGRGAVVPGAGLRRPTYTPPSIMPQKHWVYV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KRGGNCPAPAPLVPQDPDLEEEEEEEDLVLTCEDDEDEELGGSSRVPVGGGPEATLSISD
       :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KRGGNCPAPTPLVPQDPDLEEEEEEEDLVLTCEDDEDEELGGSSRVPVGGGPEATLSISD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 VRTLSEPPDKGEEQVNFCESSNDFGPYEGGGPVAGLDDSGGPTPSSYAPSHPPRPLLPLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VRTLSEPPDKGEEQVNFCESSNDFGPYEGGGPVAGLDDSGGPTPSSYAPSHPPRPLLPLD
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 MQGNQILVFPSSSSSSSSQAPGQPPGNQAEHGAVTVGGTSVGSLGVPGSVGGVPGGTGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MQGNQILVFPSSSSSSSSQAPGQPPGNQAEHGAVTVGGTSVGSLGVPGSVGGVPGGTGSG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 DGNKIFLCHCGKAFSHKSMRDRHVNMHLNLRPFDCPVCNKKFKMKHHLTEHMKTHTGLKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DGNKIFLCHCGKAFSHKSMRDRHVNMHLNLRPFDCPVCNKKFKMKHHLTEHMKTHTGLKP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB7 YECGVCAKKFMWRDSFMRHRGHCERRHRLGGVGAVPGPGTPTGPSLPSKRESPGVGGGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YECGVCAKKFMWRDSFMRHRGHCERRHRLGGVGAVPGPGTPTGPSLPSKRESPGVGGGSG
              550       560       570       580       590       600

              610       620       630    
pF1KB7 DEASAATPPSSRRVWSPPRVHKVEMGFGGGGGAN
       ::::::::::::::::::::::::::::::::::
CCDS47 DEASAATPPSSRRVWSPPRVHKVEMGFGGGGGAN
              610       620       630    




634 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 21:12:20 2016 done: Fri Nov  4 21:12:21 2016
 Total Scan time:  4.280 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]