Result of FASTA (omim) for
pF1KB7910
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7910, 330 aa
1>>>pF1KB7910 330 - 330 aa - 330 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5054+/-0.00041; mu= 7.6385+/- 0.025
mean_var=257.6052+/-53.256, 0's: 0 Z-trim(120.3): 1908 B-trim: 148 in 1/56
Lambda= 0.079909
statistics sampled from 33037 (35294) to 33037 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.414), width: 16
Scan time: 8.050
The best scores are: opt bits E(85289)
NP_004179 (OMIM: 187900,604383) zinc finger protei ( 330) 2348 283.6 3.9e-76
XP_011517372 (OMIM: 187900,604383) PREDICTED: zinc ( 330) 2348 283.6 3.9e-76
XP_016870664 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 1749 214.6 2.5e-55
XP_006717360 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 1749 214.6 2.5e-55
XP_011517371 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 1749 214.6 2.5e-55
XP_011517370 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 1749 214.6 2.5e-55
XP_016870665 (OMIM: 187900,604383) PREDICTED: zinc ( 284) 1200 151.2 2.4e-36
NP_001128503 (OMIM: 187900,604383) zinc finger pro ( 284) 1200 151.2 2.4e-36
XP_005270806 (OMIM: 600871,607847,613107) PREDICTE ( 422) 1126 142.9 1.1e-33
XP_011539547 (OMIM: 600871,607847,613107) PREDICTE ( 422) 1126 142.9 1.1e-33
NP_001120687 (OMIM: 600871,607847,613107) zinc fin ( 422) 1126 142.9 1.1e-33
NP_005254 (OMIM: 600871,607847,613107) zinc finger ( 422) 1126 142.9 1.1e-33
NP_001120688 (OMIM: 600871,607847,613107) zinc fin ( 422) 1126 142.9 1.1e-33
XP_011539548 (OMIM: 600871,607847,613107) PREDICTE ( 422) 1126 142.9 1.1e-33
NP_001153736 (OMIM: 613301,616030) fez family zinc ( 425) 619 84.4 4.5e-16
XP_011514504 (OMIM: 613301,616030) PREDICTED: fez ( 425) 619 84.4 4.5e-16
XP_005250394 (OMIM: 613301,616030) PREDICTED: fez ( 475) 619 84.5 4.8e-16
NP_001019784 (OMIM: 613301,616030) fez family zinc ( 475) 619 84.5 4.8e-16
NP_060478 (OMIM: 607414) fez family zinc finger pr ( 459) 606 83.0 1.3e-15
NP_066575 (OMIM: 194532) zinc finger protein 8 [Ho ( 575) 592 81.5 4.7e-15
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 589 80.9 4.7e-15
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 589 80.9 4.7e-15
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 589 80.9 4.7e-15
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 589 80.9 4.7e-15
XP_016873758 (OMIM: 605015) PREDICTED: zinc finger ( 592) 591 81.4 5.2e-15
XP_011518659 (OMIM: 605015) PREDICTED: zinc finger ( 592) 591 81.4 5.2e-15
XP_006718372 (OMIM: 605015) PREDICTED: zinc finger ( 592) 591 81.4 5.2e-15
XP_005253186 (OMIM: 605015) PREDICTED: zinc finger ( 592) 591 81.4 5.2e-15
XP_005253185 (OMIM: 605015) PREDICTED: zinc finger ( 606) 591 81.4 5.3e-15
XP_006718371 (OMIM: 605015) PREDICTED: zinc finger ( 606) 591 81.4 5.3e-15
NP_037381 (OMIM: 605015) zinc finger protein 214 [ ( 606) 591 81.4 5.3e-15
XP_011518657 (OMIM: 605015) PREDICTED: zinc finger ( 617) 591 81.4 5.3e-15
XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 588 81.0 6e-15
XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 588 81.0 6e-15
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 589 81.2 6e-15
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 589 81.2 6e-15
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 589 81.2 6e-15
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 589 81.2 6e-15
NP_068735 (OMIM: 194544) zinc finger protein 70 [H ( 446) 587 80.8 6e-15
XP_005255861 (OMIM: 609451) PREDICTED: zinc finger ( 636) 588 81.1 6.9e-15
NP_001292132 (OMIM: 609451) zinc finger protein 90 ( 636) 588 81.1 6.9e-15
NP_597715 (OMIM: 609451) zinc finger protein 90 ho ( 636) 588 81.1 6.9e-15
XP_016881640 (OMIM: 604750) PREDICTED: zinc finger ( 669) 588 81.1 7.1e-15
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 585 80.6 7.1e-15
XP_016881639 (OMIM: 604750) PREDICTED: zinc finger ( 688) 588 81.2 7.2e-15
XP_016881638 (OMIM: 604750) PREDICTED: zinc finger ( 700) 588 81.2 7.3e-15
NP_006621 (OMIM: 604750) zinc finger protein 234 [ ( 700) 588 81.2 7.3e-15
NP_001138296 (OMIM: 604750) zinc finger protein 23 ( 700) 588 81.2 7.3e-15
XP_006723037 (OMIM: 604750) PREDICTED: zinc finger ( 700) 588 81.2 7.3e-15
NP_001070663 (OMIM: 611703) zinc finger protein 43 ( 470) 585 80.6 7.3e-15
>>NP_004179 (OMIM: 187900,604383) zinc finger protein Gf (330 aa)
initn: 2348 init1: 2348 opt: 2348 Z-score: 1487.9 bits: 283.6 E(85289): 3.9e-76
Smith-Waterman score: 2348; 100.0% identity (100.0% similar) in 330 aa overlap (1-330:1-330)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
250 260 270 280 290 300
310 320 330
pF1KB7 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::
NP_004 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330
>>XP_011517372 (OMIM: 187900,604383) PREDICTED: zinc fin (330 aa)
initn: 2348 init1: 2348 opt: 2348 Z-score: 1487.9 bits: 283.6 E(85289): 3.9e-76
Smith-Waterman score: 2348; 100.0% identity (100.0% similar) in 330 aa overlap (1-330:1-330)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
250 260 270 280 290 300
310 320 330
pF1KB7 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::
XP_011 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330
>>XP_016870664 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 1829 init1: 1528 opt: 1749 Z-score: 1114.4 bits: 214.6 E(85289): 2.5e-55
Smith-Waterman score: 2294; 93.8% identity (93.8% similar) in 352 aa overlap (1-330:1-352)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQ----------------------ER
:::::::::::::::::::::::::::::::::::: ::
XP_016 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQER
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330 340 350
>>XP_006717360 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 1829 init1: 1528 opt: 1749 Z-score: 1114.4 bits: 214.6 E(85289): 2.5e-55
Smith-Waterman score: 2294; 93.8% identity (93.8% similar) in 352 aa overlap (1-330:1-352)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQ----------------------ER
:::::::::::::::::::::::::::::::::::: ::
XP_006 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQER
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330 340 350
>>XP_011517371 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 1829 init1: 1528 opt: 1749 Z-score: 1114.4 bits: 214.6 E(85289): 2.5e-55
Smith-Waterman score: 2294; 93.8% identity (93.8% similar) in 352 aa overlap (1-330:1-352)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQ----------------------ER
:::::::::::::::::::::::::::::::::::: ::
XP_011 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQER
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330 340 350
>>XP_011517370 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 1829 init1: 1528 opt: 1749 Z-score: 1114.4 bits: 214.6 E(85289): 2.5e-55
Smith-Waterman score: 2294; 93.8% identity (93.8% similar) in 352 aa overlap (1-330:1-352)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
130 140 150 160 170 180
190 200 210
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQ----------------------ER
:::::::::::::::::::::::::::::::::::: ::
XP_011 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQER
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKC
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK
310 320 330 340 350
>>XP_016870665 (OMIM: 187900,604383) PREDICTED: zinc fin (284 aa)
initn: 1697 init1: 1200 opt: 1200 Z-score: 773.4 bits: 151.2 E(85289): 2.4e-36
Smith-Waterman score: 1918; 86.1% identity (86.1% similar) in 330 aa overlap (1-330:1-284)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNK----------
130 140 150 160 170
190 200 210 220 230 240
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
::::::::::::::::::::::::
XP_016 ------------------------------------ERSFECRMCGKAFKRSSTLSTHLL
180 190
250 260 270 280 290 300
pF1KB7 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
200 210 220 230 240 250
310 320 330
pF1KB7 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::
XP_016 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
260 270 280
>>NP_001128503 (OMIM: 187900,604383) zinc finger protein (284 aa)
initn: 1697 init1: 1200 opt: 1200 Z-score: 773.4 bits: 151.2 E(85289): 2.4e-36
Smith-Waterman score: 1918; 86.1% identity (86.1% similar) in 330 aa overlap (1-330:1-284)
10 20 30 40 50 60
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNK----------
130 140 150 160 170
190 200 210 220 230 240
pF1KB7 HVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL
::::::::::::::::::::::::
NP_001 ------------------------------------ERSFECRMCGKAFKRSSTLSTHLL
180 190
250 260 270 280 290 300
pF1KB7 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
200 210 220 230 240 250
310 320 330
pF1KB7 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
::::::::::::::::::::::::::::::
NP_001 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
260 270 280
>>XP_005270806 (OMIM: 600871,607847,613107) PREDICTED: z (422 aa)
initn: 1241 init1: 1126 opt: 1126 Z-score: 725.4 bits: 142.9 E(85289): 1.1e-33
Smith-Waterman score: 1127; 52.5% identity (71.6% similar) in 341 aa overlap (19-330:82-422)
10 20 30 40
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLW-PPALTPVP---RDQAPSNSP
: .: : .: ::. . : ... :: .
XP_005 RDRLSPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDE
60 70 80 90 100 110
50 60 70 80
pF1KB7 VLSTLFPNQCLDWTNL----------KREP--ELEQDQNLARM---APAPEGPIVLSRPQ
. .: . .:..: . .: ::. .:. . :: : : .: :.
XP_005 AQPFPLPFKPYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPK
120 130 140 150 160 170
90 100 110 120 130
pF1KB7 DGDSPLSDSPP---------FYKPSFS-WDTLATTYGHSYRQAPSTMQSAFLEHSVSLYG
. . . . : :... . .... . :.. .. . :.. .:..
XP_005 RAAGGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHA
180 190 200 210 220 230
140 150 160 170 180 190
pF1KB7 SPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGK
. . . . : : .:.:.::.:::::::::::::::::::::::::..:::
XP_005 DKGAGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGK
240 250 260 270 280 290
200 210 220 230 240 250
pF1KB7 TFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQ
::::::::::: ::::::::.:..:::.:::::::::::::::::::::::.:::::::
XP_005 TFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQ
300 310 320 330 340 350
260 270 280 290 300 310
pF1KB7 KSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDL
::::::::.::::::::::::::::::::::::::::::::::::.:.:: :::::::::
XP_005 KSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDL
360 370 380 390 400 410
320 330
pF1KB7 RRHRESQHNLK
:::::.::.::
XP_005 RRHRETQHGLK
420
>>XP_011539547 (OMIM: 600871,607847,613107) PREDICTED: z (422 aa)
initn: 1241 init1: 1126 opt: 1126 Z-score: 725.4 bits: 142.9 E(85289): 1.1e-33
Smith-Waterman score: 1127; 52.5% identity (71.6% similar) in 341 aa overlap (19-330:82-422)
10 20 30 40
pF1KB7 MPRSFLVKSKKAHTYHQPRVQEDEPLW-PPALTPVP---RDQAPSNSP
: .: : .: ::. . : ... :: .
XP_011 RDRLSPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDE
60 70 80 90 100 110
50 60 70 80
pF1KB7 VLSTLFPNQCLDWTNL----------KREP--ELEQDQNLARM---APAPEGPIVLSRPQ
. .: . .:..: . .: ::. .:. . :: : : .: :.
XP_011 AQPFPLPFKPYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPK
120 130 140 150 160 170
90 100 110 120 130
pF1KB7 DGDSPLSDSPP---------FYKPSFS-WDTLATTYGHSYRQAPSTMQSAFLEHSVSLYG
. . . . : :... . .... . :.. .. . :.. .:..
XP_011 RAAGGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHA
180 190 200 210 220 230
140 150 160 170 180 190
pF1KB7 SPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGK
. . . . : : .:.:.::.:::::::::::::::::::::::::..:::
XP_011 DKGAGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGK
240 250 260 270 280 290
200 210 220 230 240 250
pF1KB7 TFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQ
::::::::::: ::::::::.:..:::.:::::::::::::::::::::::.:::::::
XP_011 TFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQ
300 310 320 330 340 350
260 270 280 290 300 310
pF1KB7 KSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDL
::::::::.::::::::::::::::::::::::::::::::::::.:.:: :::::::::
XP_011 KSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDL
360 370 380 390 400 410
320 330
pF1KB7 RRHRESQHNLK
:::::.::.::
XP_011 RRHRETQHGLK
420
330 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:09:55 2016 done: Sat Nov 5 10:09:56 2016
Total Scan time: 8.050 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]