Result of FASTA (omim) for
pF1KB7952
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7952, 394 aa
1>>>pF1KB7952 394 - 394 aa - 394 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8180+/-0.000499; mu= 12.0135+/- 0.031
mean_var=291.7401+/-61.314, 0's: 0 Z-trim(116.9): 1881 B-trim: 123 in 1/53
Lambda= 0.075089
statistics sampled from 26180 (28417) to 26180 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.333), width: 16
Scan time: 7.790
The best scores are: opt bits E(85289)
XP_016866756 (OMIM: 602246) PREDICTED: zinc finger ( 394) 2761 313.0 7.7e-85
NP_001186409 (OMIM: 602246) zinc finger and SCAN d ( 394) 2761 313.0 7.7e-85
NP_006290 (OMIM: 602246) zinc finger and SCAN doma ( 394) 2761 313.0 7.7e-85
XP_011513180 (OMIM: 602246) PREDICTED: zinc finger ( 526) 2761 313.3 8.9e-85
NP_001186408 (OMIM: 602246) zinc finger and SCAN d ( 445) 1481 174.5 4.5e-43
XP_011513178 (OMIM: 602246) PREDICTED: zinc finger ( 577) 1481 174.7 5.1e-43
XP_011513177 (OMIM: 602246) PREDICTED: zinc finger ( 583) 1481 174.7 5.2e-43
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1228 147.0 7.7e-35
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1228 147.0 7.7e-35
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 1061 128.8 2e-29
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 1061 128.8 2e-29
NP_001309215 (OMIM: 609600) zinc finger protein 39 ( 335) 904 111.8 2.6e-24
XP_016881176 (OMIM: 609600) PREDICTED: zinc finger ( 335) 904 111.8 2.6e-24
NP_001309219 (OMIM: 609600) zinc finger protein 39 ( 335) 904 111.8 2.6e-24
XP_016881177 (OMIM: 609600) PREDICTED: zinc finger ( 335) 904 111.8 2.6e-24
XP_006722495 (OMIM: 609600) PREDICTED: zinc finger ( 335) 904 111.8 2.6e-24
NP_001307884 (OMIM: 616463) zinc finger protein 23 ( 416) 903 111.8 3.1e-24
XP_016880511 (OMIM: 616463) PREDICTED: zinc finger ( 368) 887 110.0 9.6e-24
NP_665699 (OMIM: 609600) zinc finger protein 396 i ( 333) 809 101.5 3.2e-21
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 800 100.6 6.8e-21
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 800 100.6 6.8e-21
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 800 100.6 6.8e-21
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 800 100.6 6.8e-21
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 800 100.9 8.3e-21
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 800 100.9 8.3e-21
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 800 100.9 8.3e-21
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 800 100.9 8.3e-21
NP_001291435 (OMIM: 611643) zinc finger protein wi ( 390) 750 95.2 2.9e-19
XP_016866333 (OMIM: 611643) PREDICTED: zinc finger ( 390) 750 95.2 2.9e-19
XP_011512891 (OMIM: 611643) PREDICTED: zinc finger ( 390) 750 95.2 2.9e-19
XP_006715158 (OMIM: 611643) PREDICTED: zinc finger ( 408) 750 95.2 3e-19
XP_005249157 (OMIM: 611643) PREDICTED: zinc finger ( 418) 750 95.2 3e-19
XP_005249155 (OMIM: 611643) PREDICTED: zinc finger ( 442) 750 95.3 3.1e-19
XP_005249154 (OMIM: 611643) PREDICTED: zinc finger ( 442) 750 95.3 3.1e-19
XP_011512890 (OMIM: 611643) PREDICTED: zinc finger ( 516) 750 95.4 3.4e-19
NP_061983 (OMIM: 611643) zinc finger protein with ( 545) 750 95.4 3.4e-19
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545) 750 95.4 3.4e-19
XP_006715281 (OMIM: 612791) PREDICTED: zinc finger ( 390) 744 94.5 4.6e-19
>>XP_016866756 (OMIM: 602246) PREDICTED: zinc finger and (394 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 1644.2 bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
310 320 330 340 350 360
370 380 390
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::::::::::::::::::::::::::::::::::
XP_016 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
370 380 390
>>NP_001186409 (OMIM: 602246) zinc finger and SCAN domai (394 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 1644.2 bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
310 320 330 340 350 360
370 380 390
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::::::::::::::::::::::::::::::::::
NP_001 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
370 380 390
>>NP_006290 (OMIM: 602246) zinc finger and SCAN domain-c (394 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 1644.2 bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
310 320 330 340 350 360
370 380 390
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::::::::::::::::::::::::::::::::::
NP_006 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
370 380 390
>>XP_011513180 (OMIM: 602246) PREDICTED: zinc finger and (526 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 1643.0 bits: 313.3 E(85289): 8.9e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:133-526)
10 20 30
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAK
::::::::::::::::::::::::::::::
XP_011 TPMGFRQAPPRFVLKHSSSWRVPFKLFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAK
110 120 130 140 150 160
40 50 60 70 80 90
pF1KB7 SHLQWQESRLKRSNPLAREIFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHLQWQESRLKRSNPLAREIFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQ
170 180 190 200 210 220
100 110 120 130 140 150
pF1KB7 ILDLLVLEQFLSILPKELQGWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILDLLVLEQFLSILPKELQGWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEV
230 240 250 260 270 280
160 170 180 190 200 210
pF1KB7 LCKEMVPLAEQTPLTLQSQPKEPQLTCDSAQKCHSIGETDEVTKTEDRELVLRKDCPKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCKEMVPLAEQTPLTLQSQPKEPQLTCDSAQKCHSIGETDEVTKTEDRELVLRKDCPKIV
290 300 310 320 330 340
220 230 240 250 260 270
pF1KB7 EPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLI
350 360 370 380 390 400
280 290 300 310 320 330
pF1KB7 RHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQR
410 420 430 440 450 460
340 350 360 370 380 390
pF1KB7 IHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTV
470 480 490 500 510 520
pF1KB7 AELV
::::
XP_011 AELV
>>NP_001186408 (OMIM: 602246) zinc finger and SCAN domai (445 aa)
initn: 1723 init1: 1476 opt: 1481 Z-score: 894.3 bits: 174.5 E(85289): 4.5e-43
Smith-Waterman score: 2525; 88.0% identity (88.0% similar) in 426 aa overlap (20-394:20-445)
10 20 30 40 50 60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
:::::::::::::::::::::::::::::::::::::::::
NP_001 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
130 140 150 160 170 180
190
pF1KB7 QKCHSIGETD--------------------------------------------------
::::::::::
NP_001 QKCHSIGETDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGGETWPNNRGVLR
190 200 210 220 230 240
200 210 220 230 240
pF1KB7 -EVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLL
250 260 270 280 290 300
250 260 270 280 290 300
pF1KB7 GEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKR
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 YHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCI
370 380 390 400 410 420
370 380 390
pF1KB7 ECGKSFNRHCNLIRHQKIHTVAELV
:::::::::::::::::::::::::
NP_001 ECGKSFNRHCNLIRHQKIHTVAELV
430 440
>>XP_011513178 (OMIM: 602246) PREDICTED: zinc finger and (577 aa)
initn: 1723 init1: 1476 opt: 1481 Z-score: 893.2 bits: 174.7 E(85289): 5.1e-43
Smith-Waterman score: 2525; 88.0% identity (88.0% similar) in 426 aa overlap (20-394:152-577)
10 20 30 40
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLARE
::::::::::::::::::::::::::::::
XP_011 WRVPFKLFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLARE
130 140 150 160 170 180
50 60 70 80 90 100
pF1KB7 IFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQ
190 200 210 220 230 240
110 120 130 140 150 160
pF1KB7 GWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQ
250 260 270 280 290 300
170 180 190
pF1KB7 PKEPQLTCDSAQKCHSIGETD---------------------------------------
:::::::::::::::::::::
XP_011 PKEPQLTCDSAQKCHSIGETDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGG
310 320 330 340 350 360
200 210 220 230
pF1KB7 ------------EVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETWPNNRGVLRDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
370 380 390 400 410 420
240 250 260 270 280 290
pF1KB7 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
430 440 450 460 470 480
300 310 320 330 340 350
pF1KB7 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
490 500 510 520 530 540
360 370 380 390
pF1KB7 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::::::::::::::::::::::::::::::::::::
XP_011 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
550 560 570
>>XP_011513177 (OMIM: 602246) PREDICTED: zinc finger and (583 aa)
initn: 2747 init1: 1476 opt: 1481 Z-score: 893.2 bits: 174.7 E(85289): 5.2e-43
Smith-Waterman score: 2479; 86.6% identity (86.6% similar) in 426 aa overlap (26-394:158-583)
10 20 30 40 50
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHF
::::::::::::::::::::::::::::::
XP_011 LFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHF
130 140 150 160 170 180
60 70 80 90 100 110
pF1KB7 RQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREH
190 200 210 220 230 240
120 130 140 150 160 170
pF1KB7 CPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQL
250 260 270 280 290 300
180
pF1KB7 TCDSAQKCHSIGET----------------------------------------------
::::::::::::::
XP_011 TCDSAQKCHSIGETAPLWISDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGG
310 320 330 340 350 360
190 200 210 220 230
pF1KB7 -----------DEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETWPNNRGVLRDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
370 380 390 400 410 420
240 250 260 270 280 290
pF1KB7 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
430 440 450 460 470 480
300 310 320 330 340 350
pF1KB7 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
490 500 510 520 530 540
360 370 380 390
pF1KB7 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::::::::::::::::::::::::::::::::::::
XP_011 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
550 560 570 580
>>XP_011513111 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1147 init1: 662 opt: 1228 Z-score: 746.5 bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)
10 20 30 40 50
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
:: .: :... : ::..:. .: ..: :. :::.
XP_011 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
10 20 30 40
60 70 80 90 100 110
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_011 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
:::::: ..::::.::.:: .. :.: ..::: ... : ..: : .: :: ::
XP_011 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
.: : :.. : : . :..::. ... : .: : .. .:: : .. :.
XP_011 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
.. .. :.: .. :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_011 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
.: .:: :. .: :.::::::.:: : :: .:.::: :::::.:. :.:.. : :..
XP_011 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
290 300 310 320 330 340
360 370 380 390
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::: ::::. .:: ::::.: .. .:..: ..::
XP_011 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
350 360 370 380 390 400
XP_011 HTGERP
>>XP_011513110 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1147 init1: 662 opt: 1228 Z-score: 746.5 bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)
10 20 30 40 50
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
:: .: :... : ::..:. .: ..: :. :::.
XP_011 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
10 20 30 40
60 70 80 90 100 110
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_011 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
:::::: ..::::.::.:: .. :.: ..::: ... : ..: : .: :: ::
XP_011 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
.: : :.. : : . :..::. ... : .: : .. .:: : .. :.
XP_011 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
.. .. :.: .. :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_011 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
.: .:: :. .: :.::::::.:: : :: .:.::: :::::.:. :.:.. : :..
XP_011 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
290 300 310 320 330 340
360 370 380 390
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::: ::::. .:: ::::.: .. .:..: ..::
XP_011 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
350 360 370 380 390 400
XP_011 HTGERP
>>XP_005249353 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1147 init1: 662 opt: 1228 Z-score: 746.5 bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)
10 20 30 40 50
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
:: .: :... : ::..:. .: ..: :. :::.
XP_005 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
10 20 30 40
60 70 80 90 100 110
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_005 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
:::::: ..::::.::.:: .. :.: ..::: ... : ..: : .: :: ::
XP_005 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
.: : :.. : : . :..::. ... : .: : .. .:: : .. :.
XP_005 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
.. .. :.: .. :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_005 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
.: .:: :. .: :.::::::.:: : :: .:.::: :::::.:. :.:.. : :..
XP_005 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
290 300 310 320 330 340
360 370 380 390
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
::: ::::. .:: ::::.: .. .:..: ..::
XP_005 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
350 360 370 380 390 400
XP_005 HTGERP
394 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:50:07 2016 done: Sat Nov 5 19:50:08 2016
Total Scan time: 7.790 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]