Result of FASTA (omim) for
pF1KB7966
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7966, 401 aa
1>>>pF1KB7966 401 - 401 aa - 401 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5252+/-0.000328; mu= 6.0614+/- 0.021
mean_var=258.6000+/-53.561, 0's: 0 Z-trim(124.5): 88 B-trim: 2683 in 2/60
Lambda= 0.079755
statistics sampled from 46249 (46360) to 46249 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.821), E-opt: 0.2 (0.544), width: 16
Scan time: 10.850
The best scores are: opt bits E(85289)
NP_733796 (OMIM: 142946,602630) homeobox protein T ( 401) 2747 328.5 1.8e-89
NP_775299 (OMIM: 142946,602630) homeobox protein T ( 286) 1787 217.9 2.5e-56
XP_016881447 (OMIM: 142946,602630) PREDICTED: home ( 272) 1784 217.5 3.1e-56
NP_001265613 (OMIM: 142946,602630) homeobox protei ( 272) 1784 217.5 3.1e-56
NP_003235 (OMIM: 142946,602630) homeobox protein T ( 272) 1784 217.5 3.1e-56
NP_775300 (OMIM: 142946,602630) homeobox protein T ( 272) 1784 217.5 3.1e-56
NP_001265611 (OMIM: 142946,602630) homeobox protei ( 275) 1773 216.3 7.4e-56
XP_011524037 (OMIM: 142946,602630) PREDICTED: home ( 252) 1688 206.4 6.2e-53
NP_775301 (OMIM: 142946,602630) homeobox protein T ( 252) 1688 206.4 6.2e-53
NP_001265615 (OMIM: 142946,602630) homeobox protei ( 252) 1688 206.4 6.2e-53
NP_777480 (OMIM: 142946,602630) homeobox protein T ( 252) 1688 206.4 6.2e-53
NP_775302 (OMIM: 142946,602630) homeobox protein T ( 252) 1688 206.4 6.2e-53
XP_016881448 (OMIM: 142946,602630) PREDICTED: home ( 252) 1688 206.4 6.2e-53
NP_775303 (OMIM: 142946,602630) homeobox protein T ( 252) 1688 206.4 6.2e-53
NP_001186442 (OMIM: 607294) homeobox protein TGIF2 ( 237) 533 73.5 6e-13
NP_068581 (OMIM: 607294) homeobox protein TGIF2 [H ( 237) 533 73.5 6e-13
NP_001186443 (OMIM: 607294) homeobox protein TGIF2 ( 237) 533 73.5 6e-13
NP_001186444 (OMIM: 607294) homeobox protein TGIF2 ( 237) 533 73.5 6e-13
NP_631960 (OMIM: 400025) homeobox protein TGIF2LY ( 185) 383 56.1 8e-08
NP_620410 (OMIM: 300411) homeobox protein TGIF2LX ( 241) 383 56.3 9.5e-08
XP_016859633 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 266 42.9 0.0013
XP_016859634 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 266 42.9 0.0013
XP_005264381 (OMIM: 601739) PREDICTED: homeobox pr ( 400) 266 43.0 0.0015
XP_016873600 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 264 42.7 0.0016
XP_011541249 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 264 42.7 0.0016
XP_006718957 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 264 42.7 0.0016
XP_005264379 (OMIM: 601739) PREDICTED: homeobox pr ( 465) 266 43.1 0.0017
XP_005264378 (OMIM: 601739) PREDICTED: homeobox pr ( 481) 266 43.1 0.0017
XP_005271700 (OMIM: 613066) PREDICTED: homeobox pr ( 443) 264 42.9 0.0019
NP_733776 (OMIM: 601740) homeobox protein Meis2 is ( 470) 264 42.9 0.002
NP_001207411 (OMIM: 601740) homeobox protein Meis2 ( 470) 264 42.9 0.002
XP_011541247 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 264 42.9 0.002
XP_005271699 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 264 42.9 0.002
XP_011541246 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 264 42.9 0.002
NP_071345 (OMIM: 613066) homeobox protein PKNOX2 [ ( 472) 264 42.9 0.002
XP_016873599 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 264 42.9 0.002
XP_006720590 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 258 42.0 0.0025
XP_011519893 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 258 42.0 0.0025
XP_006720589 (OMIM: 601740) PREDICTED: homeobox pr ( 389) 258 42.1 0.0028
XP_006720586 (OMIM: 601740) PREDICTED: homeobox pr ( 476) 258 42.2 0.0032
NP_733775 (OMIM: 601740) homeobox protein Meis2 is ( 477) 258 42.2 0.0032
NP_001273187 (OMIM: 602100) homeobox protein PKNOX ( 319) 254 41.6 0.0034
NP_001307623 (OMIM: 602100) homeobox protein PKNOX ( 435) 254 41.7 0.0042
NP_004562 (OMIM: 602100) homeobox protein PKNOX1 i ( 436) 254 41.7 0.0042
XP_016859632 (OMIM: 601739) PREDICTED: homeobox pr ( 352) 251 41.3 0.0046
XP_016859631 (OMIM: 601739) PREDICTED: homeobox pr ( 417) 251 41.3 0.0052
XP_016859630 (OMIM: 601739) PREDICTED: homeobox pr ( 433) 251 41.3 0.0053
XP_016877694 (OMIM: 601740) PREDICTED: homeobox pr ( 306) 244 40.4 0.0073
NP_758527 (OMIM: 601740) homeobox protein Meis2 is ( 306) 244 40.4 0.0073
XP_016859635 (OMIM: 601739) PREDICTED: homeobox pr ( 246) 241 39.9 0.008
>>NP_733796 (OMIM: 142946,602630) homeobox protein TGIF1 (401 aa)
initn: 2747 init1: 2747 opt: 2747 Z-score: 1727.4 bits: 328.5 E(85289): 1.8e-89
Smith-Waterman score: 2747; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KB7 MVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG
310 320 330 340 350 360
370 380 390 400
pF1KB7 LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
:::::::::::::::::::::::::::::::::::::::::
NP_733 LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
370 380 390 400
>>NP_775299 (OMIM: 142946,602630) homeobox protein TGIF1 (286 aa)
initn: 1787 init1: 1787 opt: 1787 Z-score: 1132.2 bits: 217.9 E(85289): 2.5e-56
Smith-Waterman score: 1787; 97.8% identity (98.5% similar) in 275 aa overlap (127-401:12-286)
100 110 120 130 140 150
pF1KB7 ELGTKAGPRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDL
: : . .::::::::::::::::::::::
NP_775 MTCSGKSCALARSSLTSSQGIVAASGSETEDEDSMDIPLDL
10 20 30 40
160 170 180 190 200 210
pF1KB7 SSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 SSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFI
50 60 70 80 90 100
220 230 240 250 260 270
pF1KB7 NARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 NARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAG
110 120 130 140 150 160
280 290 300 310 320 330
pF1KB7 PNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 PNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKN
170 180 190 200 210 220
340 350 360 370 380 390
pF1KB7 FTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 FTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQ
230 240 250 260 270 280
400
pF1KB7 AKLTA
:::::
NP_775 AKLTA
>>XP_016881447 (OMIM: 142946,602630) PREDICTED: homeobox (272 aa)
initn: 1784 init1: 1784 opt: 1784 Z-score: 1130.6 bits: 217.5 E(85289): 3.1e-56
Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 268 aa overlap (134-401:5-272)
110 120 130 140 150 160
pF1KB7 PRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG
::::::::::::::::::::::::::::::
XP_016 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSG
10 20 30
170 180 190 200 210 220
pF1KB7 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250 260 270
>>NP_001265613 (OMIM: 142946,602630) homeobox protein TG (272 aa)
initn: 1784 init1: 1784 opt: 1784 Z-score: 1130.6 bits: 217.5 E(85289): 3.1e-56
Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 268 aa overlap (134-401:5-272)
110 120 130 140 150 160
pF1KB7 PRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG
::::::::::::::::::::::::::::::
NP_001 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSG
10 20 30
170 180 190 200 210 220
pF1KB7 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250 260 270
>>NP_003235 (OMIM: 142946,602630) homeobox protein TGIF1 (272 aa)
initn: 1784 init1: 1784 opt: 1784 Z-score: 1130.6 bits: 217.5 E(85289): 3.1e-56
Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 268 aa overlap (134-401:5-272)
110 120 130 140 150 160
pF1KB7 PRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG
::::::::::::::::::::::::::::::
NP_003 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSG
10 20 30
170 180 190 200 210 220
pF1KB7 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250 260 270
>>NP_775300 (OMIM: 142946,602630) homeobox protein TGIF1 (272 aa)
initn: 1784 init1: 1784 opt: 1784 Z-score: 1130.6 bits: 217.5 E(85289): 3.1e-56
Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 268 aa overlap (134-401:5-272)
110 120 130 140 150 160
pF1KB7 PRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG
::::::::::::::::::::::::::::::
NP_775 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSG
10 20 30
170 180 190 200 210 220
pF1KB7 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250 260 270
>>NP_001265611 (OMIM: 142946,602630) homeobox protein TG (275 aa)
initn: 1773 init1: 1773 opt: 1773 Z-score: 1123.7 bits: 216.3 E(85289): 7.4e-56
Smith-Waterman score: 1773; 99.3% identity (100.0% similar) in 268 aa overlap (134-401:8-275)
110 120 130 140 150 160
pF1KB7 PRRPHRWELPRSPSQGAQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG
..::::::::::::::::::::::::::::
NP_001 MAAAHSGRSIVAASGSETEDEDSMDIPLDLSSSAGSG
10 20 30
170 180 190 200 210 220
pF1KB7 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250 260 270
>>XP_011524037 (OMIM: 142946,602630) PREDICTED: homeobox (252 aa)
initn: 1688 init1: 1688 opt: 1688 Z-score: 1071.4 bits: 206.4 E(85289): 6.2e-53
Smith-Waterman score: 1688; 100.0% identity (100.0% similar) in 252 aa overlap (150-401:1-252)
120 130 140 150 160 170
pF1KB7 AQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQIL
::::::::::::::::::::::::::::::
XP_011 MDIPLDLSSSAGSGKRRRRGNLPKESVQIL
10 20 30
180 190 200 210 220 230
pF1KB7 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB7 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
100 110 120 130 140 150
300 310 320 330 340 350
pF1KB7 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
160 170 180 190 200 210
360 370 380 390 400
pF1KB7 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::
XP_011 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250
>>NP_775301 (OMIM: 142946,602630) homeobox protein TGIF1 (252 aa)
initn: 1688 init1: 1688 opt: 1688 Z-score: 1071.4 bits: 206.4 E(85289): 6.2e-53
Smith-Waterman score: 1688; 100.0% identity (100.0% similar) in 252 aa overlap (150-401:1-252)
120 130 140 150 160 170
pF1KB7 AQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQIL
::::::::::::::::::::::::::::::
NP_775 MDIPLDLSSSAGSGKRRRRGNLPKESVQIL
10 20 30
180 190 200 210 220 230
pF1KB7 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB7 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
100 110 120 130 140 150
300 310 320 330 340 350
pF1KB7 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
160 170 180 190 200 210
360 370 380 390 400
pF1KB7 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::
NP_775 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250
>>NP_001265615 (OMIM: 142946,602630) homeobox protein TG (252 aa)
initn: 1688 init1: 1688 opt: 1688 Z-score: 1071.4 bits: 206.4 E(85289): 6.2e-53
Smith-Waterman score: 1688; 100.0% identity (100.0% similar) in 252 aa overlap (150-401:1-252)
120 130 140 150 160 170
pF1KB7 AQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQIL
::::::::::::::::::::::::::::::
NP_001 MDIPLDLSSSAGSGKRRRRGNLPKESVQIL
10 20 30
180 190 200 210 220 230
pF1KB7 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTI
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB7 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARP
100 110 120 130 140 150
300 310 320 330 340 350
pF1KB7 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQS
160 170 180 190 200 210
360 370 380 390 400
pF1KB7 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
::::::::::::::::::::::::::::::::::::::::::
NP_001 GLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
220 230 240 250
401 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:18:09 2016 done: Sat Nov 5 10:18:11 2016
Total Scan time: 10.850 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]