Result of FASTA (omim) for
pF1KB7974
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7974, 413 aa
1>>>pF1KB7974 413 - 413 aa - 413 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.1077+/-0.000356; mu= -13.6975+/- 0.022
mean_var=360.4624+/-76.299, 0's: 0 Z-trim(125.2): 26 B-trim: 1462 in 2/59
Lambda= 0.067553
statistics sampled from 48261 (48287) to 48261 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.566), width: 16
Scan time: 11.980
The best scores are: opt bits E(85289)
NP_001941 (OMIM: 600659) transcription factor E2F4 ( 413) 2709 277.3 5e-74
NP_001942 (OMIM: 600967) transcription factor E2F5 ( 346) 1109 121.3 3.7e-27
NP_001077057 (OMIM: 600967) transcription factor E ( 345) 1105 120.9 4.9e-27
NP_004082 (OMIM: 600426) transcription factor E2F2 ( 437) 563 68.1 4.7e-11
XP_011539170 (OMIM: 600426) PREDICTED: transcripti ( 435) 547 66.6 1.4e-10
XP_011539172 (OMIM: 600426) PREDICTED: transcripti ( 350) 541 65.9 1.7e-10
XP_005248923 (OMIM: 600427) PREDICTED: transcripti ( 335) 514 63.3 1e-09
XP_011512630 (OMIM: 600427) PREDICTED: transcripti ( 338) 514 63.3 1e-09
XP_005248922 (OMIM: 600427) PREDICTED: transcripti ( 340) 514 63.3 1.1e-09
XP_016865819 (OMIM: 600427) PREDICTED: transcripti ( 379) 514 63.3 1.2e-09
NP_001940 (OMIM: 600427) transcription factor E2F3 ( 465) 514 63.4 1.4e-09
NP_001230005 (OMIM: 600427) transcription factor E ( 334) 502 62.1 2.3e-09
XP_011512626 (OMIM: 600427) PREDICTED: transcripti ( 459) 502 62.2 3e-09
NP_001077058 (OMIM: 600967) transcription factor E ( 185) 462 58.1 2.1e-08
NP_005216 (OMIM: 189971) transcription factor E2F1 ( 437) 459 58.0 5.3e-08
NP_001265204 (OMIM: 602944) transcription factor E ( 249) 389 51.0 3.8e-06
NP_937987 (OMIM: 602944) transcription factor E2F6 ( 281) 389 51.1 4.2e-06
NP_001265207 (OMIM: 602944) transcription factor E ( 206) 356 47.8 3e-05
NP_001265206 (OMIM: 602944) transcription factor E ( 206) 356 47.8 3e-05
NP_001265205 (OMIM: 602944) transcription factor E ( 206) 356 47.8 3e-05
XP_016859037 (OMIM: 602944) PREDICTED: transcripti ( 287) 350 47.3 5.9e-05
XP_016859036 (OMIM: 602944) PREDICTED: transcripti ( 319) 350 47.3 6.5e-05
XP_016859038 (OMIM: 602944) PREDICTED: transcripti ( 244) 317 44.0 0.00048
>>NP_001941 (OMIM: 600659) transcription factor E2F4 [Ho (413 aa)
initn: 2709 init1: 2709 opt: 2709 Z-score: 1450.1 bits: 277.3 E(85289): 5e-74
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413)
10 20 30 40 50 60
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTR
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 ECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL
370 380 390 400 410
>>NP_001942 (OMIM: 600967) transcription factor E2F5 iso (346 aa)
initn: 1065 init1: 864 opt: 1109 Z-score: 608.5 bits: 121.3 E(85289): 3.7e-27
Smith-Waterman score: 1149; 52.2% identity (64.5% similar) in 414 aa overlap (6-412:33-345)
10 20
pF1KB7 MAEAGPQAPPPP------GTPSRHEKSLGLLTTKF
:: :::: : ::::::::::::::
NP_001 AAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTTKF
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB7 VSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCN
::::::::::::::: ::::::::::::::::::::::: :::::::::::::::: :::
NP_001 VSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCN
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB7 TREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCF
:.:. :.: ::::::.:. .:.::::.:.:.::::.:: .: :. ..:::::::: ::
NP_001 TKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCF
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB7 AGDTLLAIRAPSGTSLEVPIPE-GLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVP
:::::::.:::::.::::::: : ::::::::.::: ::::.:::.:::. :: ::. :
NP_001 NGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFP
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB7 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI
::::.:: : :.: .:::.
NP_001 VPPPDDLTQ------------------------PSSQSLTPV------------------
250 260
270 280 290 300 310 320
pF1KB7 TVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSG
: .:.: ..:: .. .. ::... : ::..:
NP_001 -------TPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGS----------------
270 280 290
330 340 350 360 370 380
pF1KB7 PNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPLLRLSPPPG
.:.....:::::.:: ::::::: :.
NP_001 ----------------------------------ISGDIIDELMSSDVF-PLLRLSPTPA
300 310 320
390 400 410
pF1KB7 DHDYIYNLDESEGVCDLFDVPVLNL
: :: .:::..::::::::: .::
NP_001 D-DYNFNLDDNEGVCDLFDVQILNY
330 340
>>NP_001077057 (OMIM: 600967) transcription factor E2F5 (345 aa)
initn: 1065 init1: 864 opt: 1105 Z-score: 606.4 bits: 120.9 E(85289): 4.9e-27
Smith-Waterman score: 1146; 52.2% identity (64.3% similar) in 414 aa overlap (6-412:33-344)
10 20
pF1KB7 MAEAGPQAPPPP------GTPSRHEKSLGLLTTKF
:: :::: : ::::::::::::::
NP_001 AAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTTKF
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB7 VSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCN
::::::::::::::: ::::::::::::::::::::::: :::::::::::::::: :::
NP_001 VSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCN
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB7 TREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCF
:.:. :.: ::::::.:. .:.::::.:.:.::::.:: .: :. ..:::::::: ::
NP_001 TKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCF
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB7 AGDTLLAIRAPSGTSLEVPIPE-GLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVP
:::::::.:::::.::::::: : ::::::::.::: ::::.:::.:::. :: ::. :
NP_001 NGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFP
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB7 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI
::::.:: : :.: .:::.
NP_001 VPPPDDLTQ------------------------PSSQSLTPV------------------
250 260
270 280 290 300 310 320
pF1KB7 TVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSG
: .:.: ..:: .. .. ::... : ::.:
NP_001 -------TPQKSSMATQNLPEQHVSERSQALQQTSATDISSGS-----------------
270 280 290
330 340 350 360 370 380
pF1KB7 PNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPLLRLSPPPG
.:.....:::::.:: ::::::: :.
NP_001 ----------------------------------ISGDIIDELMSSDVF-PLLRLSPTPA
300 310 320
390 400 410
pF1KB7 DHDYIYNLDESEGVCDLFDVPVLNL
: :: .:::..::::::::: .::
NP_001 D-DYNFNLDDNEGVCDLFDVQILNY
330 340
>>NP_004082 (OMIM: 600426) transcription factor E2F2 [Ho (437 aa)
initn: 460 init1: 184 opt: 563 Z-score: 319.4 bits: 68.1 E(85289): 4.7e-11
Smith-Waterman score: 563; 43.8% identity (64.9% similar) in 251 aa overlap (6-253:118-360)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :: .:.. :::::: ::. ::.:
NP_004 KLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSE
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
..::::::. ::..: : ::::::::::::::: ::.::.::.::: : : . .
NP_004 SEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQLIRKKAKNNIQWVGRGMFEDPTR-PG
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 KLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDI--CRCFAGDT
: .: :..::.. :: ::: . :....::: :. :::::..:: : .:
NP_004 KQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTEDKANKRLAYVTYQDIRAVGNFKEQT
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB7 LLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWS-SPPVAVPVPPP
..:..:: : :::: . . ::.:::..::::: : .:. . : :.:
NP_004 VIAVKAPPQTRLEVPD----RTEDNLQIYLKSTQGPIEVYLCPEEVQEPDSPSEEPLPST
270 280 290 300 310 320
220 230 240 250 260 270
pF1KB7 EDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSG
: ::.. . : :.. . .: : .: :: .:
NP_004 STLCPSPDS-AQPSSSTDPSIMEPTASSVP-APAPTPQQAPPPPSLVPLEATDSLLELPH
330 340 350 360 370
280 290 300 310 320 330
pF1KB7 GPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPS
NP_004 PLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLWGLEAGEGISDLFDSYDLGDLLIN
380 390 400 410 420 430
>>XP_011539170 (OMIM: 600426) PREDICTED: transcription f (435 aa)
initn: 512 init1: 184 opt: 547 Z-score: 311.0 bits: 66.6 E(85289): 1.4e-10
Smith-Waterman score: 547; 43.8% identity (64.9% similar) in 251 aa overlap (6-253:118-358)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :: .:.. :::::: ::. ::.:
XP_011 KLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSE
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
..::::::. ::..: : ::::::::::::::: ::.::.::.:: .:. ::
XP_011 SEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQLIRKKAKNNIQGRGMFED-PTRP--G
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 KLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDI--CRCFAGDT
: .: :..::.. :: ::: . :....::: :. :::::..:: : .:
XP_011 KQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTEDKANKRLAYVTYQDIRAVGNFKEQT
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB7 LLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWS-SPPVAVPVPPP
..:..:: : :::: . . ::.:::..::::: : .:. . : :.:
XP_011 VIAVKAPPQTRLEVPD----RTEDNLQIYLKSTQGPIEVYLCPEEVQEPDSPSEEPLPST
270 280 290 300 310
220 230 240 250 260 270
pF1KB7 EDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSG
: ::.. . : :.. . .: : .: :: .:
XP_011 STLCPSPDS-AQPSSSTDPSIMEPTASSVP-APAPTPQQAPPPPSLVPLEATDSLLELPH
320 330 340 350 360 370
280 290 300 310 320 330
pF1KB7 GPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPS
XP_011 PLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLWGLEAGEGISDLFDSYDLGDLLIN
380 390 400 410 420 430
>>XP_011539172 (OMIM: 600426) PREDICTED: transcription f (350 aa)
initn: 523 init1: 184 opt: 541 Z-score: 309.2 bits: 65.9 E(85289): 1.7e-10
Smith-Waterman score: 541; 46.2% identity (66.7% similar) in 234 aa overlap (6-231:118-344)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :: .:.. :::::: ::. ::.:
XP_011 KLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSE
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCN-TREIA
..::::::. ::..: : ::::::::::::::: ::.::.::.::: : : . ::
XP_011 SEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQLIRKKAKNNIQWVGRGMFEDPTRP--
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 DKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDI--CRCFAGD
: .: :..::.. :: ::: . :....::: :. :::::..:: : .
XP_011 GKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTEDKANKRLAYVTYQDIRAVGNFKEQ
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB7 TLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWS-SPPVAVPVPP
:..:..:: : :::: . . ::.:::..::::: : .:. . : :.:
XP_011 TVIAVKAPPQTRLEVPD----RTEDNLQIYLKSTQGPIEVYLCPEEVQEPDSPSEEPLPS
270 280 290 300 310 320
220 230 240 250 260
pF1KB7 PEDLLQSPSAV----STPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAE
: ::... :: : . .:
XP_011 TSTLCPSPDSAQPSSSTDPSIMEPTASSAS
330 340 350
>>XP_005248923 (OMIM: 600427) PREDICTED: transcription f (335 aa)
initn: 578 init1: 172 opt: 514 Z-score: 295.3 bits: 63.3 E(85289): 1e-09
Smith-Waterman score: 522; 41.6% identity (65.6% similar) in 262 aa overlap (6-244:37-287)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :. .:.. :::::: ::..::..
XP_005 ELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQ
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
. ::::::. ::..: : ::::::::::::::: ::.:::::..:: ::. : .
XP_005 SPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKSKNNVQWM----GCSLSEDGG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 KLIE---LKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFAG-
: . :. :. ::.:.:..::. ... .::: .:. :::::..:: : ..:
XP_005 MLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQRLAYVTYQDI-RKISGL
130 140 150 160 170 180
160 170 180 190 200
pF1KB7 --DTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVA---
.:.....:: : :::: .. .. :::: :..::::: : .:. . :.
XP_005 KDQTVIVVKAPPETRLEVP-----DSIESLQIHLASTQGPIEVYLCPEETETHSPMKTNN
190 200 210 220 230
210 220 230 240 250
pF1KB7 ------VPVPPPEDLLQSPS-----AVSTP--PPLPKPA-LAQSQEASRPNSPQLTPTAV
.: : .:: .. : .:: :: .:: : :. : . :..
XP_005 QDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQQTEDQIPSNLEGPFVNL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB7 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS
XP_005 LPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPLVEDFMCS
300 310 320 330
>>XP_011512630 (OMIM: 600427) PREDICTED: transcription f (338 aa)
initn: 578 init1: 172 opt: 514 Z-score: 295.2 bits: 63.3 E(85289): 1e-09
Smith-Waterman score: 522; 41.6% identity (65.6% similar) in 262 aa overlap (6-244:40-290)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :. .:.. :::::: ::..::..
XP_011 ELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQ
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
. ::::::. ::..: : ::::::::::::::: ::.:::::..:: ::. : .
XP_011 SPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKSKNNVQWM----GCSLSEDGG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 KLIE---LKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFAG-
: . :. :. ::.:.:..::. ... .::: .:. :::::..:: : ..:
XP_011 MLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQRLAYVTYQDI-RKISGL
130 140 150 160 170 180
160 170 180 190 200
pF1KB7 --DTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVA---
.:.....:: : :::: .. .. :::: :..::::: : .:. . :.
XP_011 KDQTVIVVKAPPETRLEVP-----DSIESLQIHLASTQGPIEVYLCPEETETHSPMKTNN
190 200 210 220 230
210 220 230 240 250
pF1KB7 ------VPVPPPEDLLQSPS-----AVSTP--PPLPKPA-LAQSQEASRPNSPQLTPTAV
.: : .:: .. : .:: :: .:: : :. : . :..
XP_011 QDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQQTEDQIPSNLEGPFVNL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB7 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS
XP_011 LPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPLVEDFMCS
300 310 320 330
>>XP_005248922 (OMIM: 600427) PREDICTED: transcription f (340 aa)
initn: 578 init1: 172 opt: 514 Z-score: 295.2 bits: 63.3 E(85289): 1.1e-09
Smith-Waterman score: 522; 41.6% identity (65.6% similar) in 262 aa overlap (6-244:42-292)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :. .:.. :::::: ::..::..
XP_005 ELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQ
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
. ::::::. ::..: : ::::::::::::::: ::.:::::..:: ::. : .
XP_005 SPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKSKNNVQWM----GCSLSEDGG
80 90 100 110 120
100 110 120 130 140 150
pF1KB7 KLIE---LKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFAG-
: . :. :. ::.:.:..::. ... .::: .:. :::::..:: : ..:
XP_005 MLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQRLAYVTYQDI-RKISGL
130 140 150 160 170 180
160 170 180 190 200
pF1KB7 --DTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVA---
.:.....:: : :::: .. .. :::: :..::::: : .:. . :.
XP_005 KDQTVIVVKAPPETRLEVP-----DSIESLQIHLASTQGPIEVYLCPEETETHSPMKTNN
190 200 210 220 230 240
210 220 230 240 250
pF1KB7 ------VPVPPPEDLLQSPS-----AVSTP--PPLPKPA-LAQSQEASRPNSPQLTPTAV
.: : .:: .. : .:: :: .:: : :. : . :..
XP_005 QDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQQTEDQIPSNLEGPFVNL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB7 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS
XP_005 LPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPLVEDFMCS
310 320 330 340
>>XP_016865819 (OMIM: 600427) PREDICTED: transcription f (379 aa)
initn: 578 init1: 172 opt: 514 Z-score: 294.5 bits: 63.3 E(85289): 1.2e-09
Smith-Waterman score: 522; 41.6% identity (65.6% similar) in 262 aa overlap (6-244:81-331)
10 20 30
pF1KB7 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQE
:..: :. .:.. :::::: ::..::..
XP_016 ELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQ
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB7 AKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD
. ::::::. ::..: : ::::::::::::::: ::.:::::..:: ::. : .
XP_016 SPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKSKNNVQWM----GCSLSEDGG
120 130 140 150 160
100 110 120 130 140 150
pF1KB7 KLIE---LKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFAG-
: . :. :. ::.:.:..::. ... .::: .:. :::::..:: : ..:
XP_016 MLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQRLAYVTYQDI-RKISGL
170 180 190 200 210 220
160 170 180 190 200
pF1KB7 --DTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVA---
.:.....:: : :::: .. .. :::: :..::::: : .:. . :.
XP_016 KDQTVIVVKAPPETRLEVP-----DSIESLQIHLASTQGPIEVYLCPEETETHSPMKTNN
230 240 250 260 270
210 220 230 240 250
pF1KB7 ------VPVPPPEDLLQSPS-----AVSTP--PPLPKPA-LAQSQEASRPNSPQLTPTAV
.: : .:: .. : .:: :: .:: : :. : . :..
XP_016 QDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQQTEDQIPSNLEGPFVNL
280 290 300 310 320 330
260 270 280 290 300 310
pF1KB7 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS
XP_016 LPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPLVEDFMCS
340 350 360 370
413 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:47:02 2016 done: Mon Nov 7 04:47:03 2016
Total Scan time: 11.980 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]