Result of FASTA (omim) for
pF1KB8001
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8001, 265 aa
1>>>pF1KB8001 265 - 265 aa - 265 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5275+/-0.000391; mu= 0.3240+/- 0.024
mean_var=243.4551+/-50.444, 0's: 0 Z-trim(119.9): 95 B-trim: 1198 in 1/52
Lambda= 0.082199
statistics sampled from 34467 (34573) to 34467 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.405), width: 16
Scan time: 6.050
The best scores are: opt bits E(85289)
NP_001027553 (OMIM: 300463,309500) polyglutamine-b ( 265) 1833 229.9 3.7e-60
NP_001027555 (OMIM: 300463,309500) polyglutamine-b ( 265) 1833 229.9 3.7e-60
NP_001027556 (OMIM: 300463,309500) polyglutamine-b ( 265) 1833 229.9 3.7e-60
NP_001027554 (OMIM: 300463,309500) polyglutamine-b ( 265) 1833 229.9 3.7e-60
XP_011542186 (OMIM: 300463,309500) PREDICTED: poly ( 265) 1833 229.9 3.7e-60
NP_005701 (OMIM: 300463,309500) polyglutamine-bind ( 265) 1833 229.9 3.7e-60
NP_001161461 (OMIM: 300463,309500) polyglutamine-b ( 264) 1816 227.9 1.5e-59
XP_005272628 (OMIM: 300463,309500) PREDICTED: poly ( 264) 1816 227.9 1.5e-59
XP_016884696 (OMIM: 300463,309500) PREDICTED: poly ( 264) 1816 227.9 1.5e-59
NP_001161462 (OMIM: 300463,309500) polyglutamine-b ( 257) 1742 219.1 6.3e-57
XP_005272629 (OMIM: 300463,309500) PREDICTED: poly ( 170) 685 93.6 2.6e-19
NP_652766 (OMIM: 300463,309500) polyglutamine-bind ( 170) 685 93.6 2.6e-19
NP_001161464 (OMIM: 300463,309500) polyglutamine-b ( 165) 667 91.4 1.1e-18
NP_001310463 (OMIM: 609268) splicing regulatory gl ( 359) 236 40.7 0.0046
XP_016864545 (OMIM: 609268) PREDICTED: splicing re ( 359) 236 40.7 0.0046
XP_011541473 (OMIM: 609268) PREDICTED: splicing re ( 508) 236 40.8 0.0059
NP_001310456 (OMIM: 609268) splicing regulatory gl ( 508) 236 40.8 0.0059
NP_631907 (OMIM: 609268) splicing regulatory gluta ( 508) 236 40.8 0.0059
NP_001070667 (OMIM: 609268) splicing regulatory gl ( 624) 236 40.9 0.0068
NP_001310464 (OMIM: 609268) splicing regulatory gl ( 358) 227 39.6 0.0097
>>NP_001027553 (OMIM: 300463,309500) polyglutamine-bindi (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>NP_001027555 (OMIM: 300463,309500) polyglutamine-bindi (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>NP_001027556 (OMIM: 300463,309500) polyglutamine-bindi (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>NP_001027554 (OMIM: 300463,309500) polyglutamine-bindi (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>XP_011542186 (OMIM: 300463,309500) PREDICTED: polyglut (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
XP_011 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>NP_005701 (OMIM: 300463,309500) polyglutamine-binding (265 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 1201.1 bits: 229.9 E(85289): 3.7e-60
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230 240
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_005 QQRPYPSPGAVLRANAEASRTKQQD
250 260
>>NP_001161461 (OMIM: 300463,309500) polyglutamine-bindi (264 aa)
initn: 1664 init1: 1349 opt: 1816 Z-score: 1190.2 bits: 227.9 E(85289): 1.5e-59
Smith-Waterman score: 1816; 99.6% identity (99.6% similar) in 265 aa overlap (1-265:1-264)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKK-VSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
240 250 260
>>XP_005272628 (OMIM: 300463,309500) PREDICTED: polyglut (264 aa)
initn: 1664 init1: 1349 opt: 1816 Z-score: 1190.2 bits: 227.9 E(85289): 1.5e-59
Smith-Waterman score: 1816; 99.6% identity (99.6% similar) in 265 aa overlap (1-265:1-264)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REELAPYPKSKK-VSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
XP_005 QQRPYPSPGAVLRANAEASRTKQQD
240 250 260
>>XP_016884696 (OMIM: 300463,309500) PREDICTED: polyglut (264 aa)
initn: 1664 init1: 1349 opt: 1816 Z-score: 1190.2 bits: 227.9 E(85289): 1.5e-59
Smith-Waterman score: 1816; 99.6% identity (99.6% similar) in 265 aa overlap (1-265:1-264)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REELAPYPKSKK-VSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
190 200 210 220 230
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
XP_016 QQRPYPSPGAVLRANAEASRTKQQD
240 250 260
>>NP_001161462 (OMIM: 300463,309500) polyglutamine-bindi (257 aa)
initn: 1441 init1: 1441 opt: 1742 Z-score: 1143.0 bits: 219.1 E(85289): 6.3e-57
Smith-Waterman score: 1742; 97.0% identity (97.0% similar) in 265 aa overlap (1-265:1-257)
10 20 30 40 50 60
pF1KB8 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSC
::::::::::::::::::::::::::::::::::::::::::::::::: :::
NP_001 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLP--------PSC
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPYYWNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLF
180 190 200 210 220 230
250 260
pF1KB8 QQRPYPSPGAVLRANAEASRTKQQD
:::::::::::::::::::::::::
NP_001 QQRPYPSPGAVLRANAEASRTKQQD
240 250
265 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 23:10:46 2016 done: Wed Nov 2 23:10:47 2016
Total Scan time: 6.050 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]