Result of FASTA (ccds) for
pF1KB8104
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8104, 461 aa
1>>>pF1KB8104 461 - 461 aa - 461 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1832+/-0.000789; mu= 6.8213+/- 0.048
mean_var=190.4206+/-38.172, 0's: 0 Z-trim(115.0): 4 B-trim: 101 in 1/52
Lambda= 0.092943
statistics sampled from 15602 (15605) to 15602 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.479), width: 16
Scan time: 2.180
The best scores are: opt bits E(32554)
CCDS10076.1 ITPKA gene_id:3706|Hs108|chr15 ( 461) 3126 431.1 1.2e-120
CCDS1555.1 ITPKB gene_id:3707|Hs108|chr1 ( 946) 1448 206.4 1.1e-52
CCDS12563.1 ITPKC gene_id:80271|Hs108|chr19 ( 683) 1291 185.2 1.8e-46
>>CCDS10076.1 ITPKA gene_id:3706|Hs108|chr15 (461 aa)
initn: 3126 init1: 3126 opt: 3126 Z-score: 2279.8 bits: 431.1 E(32554): 1.2e-120
Smith-Waterman score: 3126; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB8 MTLPGGPTGMARPGGARPCSPGLERAPRRSVGELRLLFEARCAAVAAAAAAGEPRARGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MTLPGGPTGMARPGGARPCSPGLERAPRRSVGELRLLFEARCAAVAAAAAAGEPRARGAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQPRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQPRRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQKNHWQKIRTMVNLPVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQKNHWQKIRTMVNLPVIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 DGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 TEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKT
370 380 390 400 410 420
430 440 450 460
pF1KB8 TPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAER
:::::::::::::::::::::::::::::::::::::::::
CCDS10 TPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAER
430 440 450 460
>>CCDS1555.1 ITPKB gene_id:3707|Hs108|chr1 (946 aa)
initn: 1400 init1: 1189 opt: 1448 Z-score: 1059.5 bits: 206.4 E(32554): 1.1e-52
Smith-Waterman score: 1448; 57.2% identity (76.5% similar) in 400 aa overlap (67-460:545-941)
40 50 60 70 80 90
pF1KB8 LFEARCAAVAAAAAAGEPRARGAKRRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSP
:. ::. : : . . .. : : :.
CCDS15 KAGLAWTRGTGVQSEGTWESQRQDSDALPSPELLPQDPDKPFLRKACSPSNIPAVIITDM
520 530 540 550 560 570
100 110 120 130 140 150
pF1KB8 GPPERERDCLPAAGSSHLQQP-RRLSTSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQL
: : . . :: . . : :.::.::.:::: :: ::::.:. :: : : .
CCDS15 GTQE-DGALEETQGSPRGNLPLRKLSSSSASSTGFSSSYEDSEEDISSDPERTLDPNSAF
580 590 600 610 620 630
160 170 180 190 200 210
pF1KB8 EAGEDVGQK----NHWQKIRTMVNL-PVISPFKKRYAWVQLAGHTGSFKAAGTSGLILKR
: :: . :.::..::. : . :::.: :.:::::.::::::. .: :::.
CCDS15 LHTLD-QQKPRVSKSWRKIKNMVHWSPFVMSFKKKYPWIQLAGHAGSFKAAA-NGRILKK
640 650 660 670 680 690
220 230 240 250 260 270
pF1KB8 CSEPERYCLARLMADALRGCVPAFHGVVERDGESYLQLQDLLDGFDGPCVLDCKMGVRTY
: :. :: :::.:.:: :::.:: : .::: : :..::: ::.:::.:::::.:::
CCDS15 HCESEQRCLDRLMVDVLRPFVPAYHGDVVKDGERYNQMDDLLADFDSPCVMDCKMGIRTY
700 710 720 730 740 750
280 290 300 310 320 330
pF1KB8 LEEELTKARERPKLRKDMYKKMLAVDPEAPTEEEHAQRAVTKPRYMQWREGISSSTTLGF
:::::::::..:.::::::.::. ::::::::::.::::::::::::::: :::..::::
CCDS15 LEEELTKARKKPSLRKDMYQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETISSTATLGF
760 770 780 790 800 810
340 350 360 370 380 390
pF1KB8 RIEGIKKADGSCSTDFKTTRSREQVLRVFEEFVQGDEEVLRRYLNRLQQIRDTLEVSEFF
::::::: ::. . ::: :..:::: ..:.::..:....: : .::. :: ::::: ::
CCDS15 RIEGIKKEDGTVNRDFKKTKTREQVTEAFREFTKGNHNILIAYRDRLKAIRTTLEVSPFF
820 830 840 850 860 870
400 410 420 430 440 450
pF1KB8 RRHEVIGSSLLFVHDHCHRAGVWLIDFGKTTPLPDGQILDHRRPWEEGNREDGYLLGLDN
. ::::::::::.::. ..: ::.::::::::::.:: :.: ::.::::::::: ::.:
CCDS15 KCHEVIGSSLLFIHDKKEQAKVWMIDFGKTTPLPEGQTLQHDVPWQEGNREDGYLSGLNN
880 890 900 910 920 930
460
pF1KB8 LIGILASLAER
:. ::. ...
CCDS15 LVDILTEMSQDAPLA
940
>>CCDS12563.1 ITPKC gene_id:80271|Hs108|chr19 (683 aa)
initn: 1253 init1: 1145 opt: 1291 Z-score: 947.6 bits: 185.2 E(32554): 1.8e-46
Smith-Waterman score: 1311; 53.1% identity (75.4% similar) in 390 aa overlap (73-460:322-682)
50 60 70 80 90 100
pF1KB8 AAVAAAAAAGEPRARGAKRRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSP-GPPER
.: :: :.: .: : :. : ..: ::: :
CCDS12 DCLLGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPV-PRLIITPETPE-PEAQPVGPPSR
300 310 320 330 340
110 120 130 140 150 160
pF1KB8 ERDCLPAAGSSHLQQPRRLSTSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDV
. .::. . ::.:: ...::::... . . : ::
CCDS12 VE-----GGSGGF--------SSASS------FDESEDDVVAGGGGASD-------PEDR
350 360 370 380
170 180 190 200 210 220
pF1KB8 GQKNHWQKIRTMVNL-PVISPFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLA
. .. :.:..:... : . :.:.: ::::.::.:.:.: : .: :::: . :. :
CCDS12 SGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGNFQA-GEDGRILKRFCQCEQRSLE
390 400 410 420 430 440
230 240 250 260 270 280
pF1KB8 RLMADALRGCVPAFHGVVERDGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARE
.:: : :: :::..:.: .::... :..::: :.:: ..::::: ::::::::.::::
CCDS12 QLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSIMDCKMGSRTYLEEELVKARE
450 460 470 480 490 500
290 300 310 320 330 340
pF1KB8 RPKLRKDMYKKMLAVDPEAPTEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADG
::. :::::.::.:::: ::: ::::: :::::::::::: .::..::::::::::::::
CCDS12 RPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRETMSSTSTLGFRIEGIKKADG
510 520 530 540 550 560
350 360 370 380 390 400
pF1KB8 SCSTDFKTTRSREQVLRVFEEFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSL
.:.:.:: :.. ::: .:.:.::.::. .:..:. :...:..::.: ::. :::.::::
CCDS12 TCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLEELREALEISPFFKTHEVVGSSL
570 580 590 600 610 620
410 420 430 440 450 460
pF1KB8 LFVHDHCHRAGVWLIDFGKTTPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAE
:::::: : ::.::::::. ::: : :.:: :: ::::::::: ::::.: .: .::.
CCDS12 LFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEGNREDGYLWGLDNMICLLQGLAQ
630 640 650 660 670 680
pF1KB8 R
CCDS12 S
461 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:30:08 2016 done: Fri Nov 4 09:30:09 2016
Total Scan time: 2.180 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]