FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8115, 400 aa
  1>>>pF1KB8115 400 - 400 aa - 400 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7373+/-0.00103; mu= 5.4956+/- 0.061
 mean_var=135.5404+/-26.718, 0's: 0 Z-trim(107.8): 29  B-trim: 10 in 1/51
 Lambda= 0.110164
 statistics sampled from 9812 (9822) to 9812 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.302), width:  16
 Scan time:  1.930

The best scores are:                                      opt bits E(32554)
CCDS1278.1 BLZF1 gene_id:8548|Hs108|chr1           ( 400) 2580 421.7 6.1e-118
CCDS81397.1 BLZF1 gene_id:8548|Hs108|chr1          ( 174) 1004 171.0 7.6e-43


>>CCDS1278.1 BLZF1 gene_id:8548|Hs108|chr1                (400 aa)
 initn: 2580 init1: 2580 opt: 2580  Z-score: 2230.9  bits: 421.7 E(32554): 6.1e-118
Smith-Waterman score: 2580; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)

               10        20        30        40        50        60
pF1KB8 MTTKNLETKVTVTSSPIRGAGDGMETEEPPKSVEVTSGVQSRKHHSLQSPWKKAVPSESP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTTKNLETKVTVTSSPIRGAGDGMETEEPPKSVEVTSGVQSRKHHSLQSPWKKAVPSESP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GVLQLGKMLTEKAMEVKAVRILVPKAAITHDIPNKNTKVKSLGHHKGEFLGQSEGVIEPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GVLQLGKMLTEKAMEVKAVRILVPKAAITHDIPNKNTKVKSLGHHKGEFLGQSEGVIEPN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 KELSEVKNVLEKLKNSERRLLQDKEGLSNQLRVQTEVNRELKKLLVASVGDDLQYHFERL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KELSEVKNVLEKLKNSERRLLQDKEGLSNQLRVQTEVNRELKKLLVASVGDDLQYHFERL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 AREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLASRVMADELTNSRAALQRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLASRVMADELTNSRAALQRQN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 RDAHGAIQDLLSEREQFRQEMIATQKLLEELLVSLQWGREQTYSPSVQPHSTAELALTNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RDAHGAIQDLLSEREQFRQEMIATQKLLEELLVSLQWGREQTYSPSVQPHSTAELALTNH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 KLAKAVNSHLLGNVGINNQKKIPSTVEFCSTPAEKMAETVLRILDPVTCKESSPDNPFFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KLAKAVNSHLLGNVGINNQKKIPSTVEFCSTPAEKMAETVLRILDPVTCKESSPDNPFFE
              310       320       330       340       350       360

              370       380       390       400
pF1KB8 SSPTTLLATKKNIGRFHPYTRYENITFNCCNHCRGELIAL
       ::::::::::::::::::::::::::::::::::::::::
CCDS12 SSPTTLLATKKNIGRFHPYTRYENITFNCCNHCRGELIAL
              370       380       390       400

>>CCDS81397.1 BLZF1 gene_id:8548|Hs108|chr1               (174 aa)
 initn: 1022 init1: 1004 opt: 1004  Z-score: 882.7  bits: 171.0 E(32554): 7.6e-43
Smith-Waterman score: 1004; 98.8% identity (98.8% similar) in 161 aa overlap (1-161:1-161)

               10        20        30        40        50        60
pF1KB8 MTTKNLETKVTVTSSPIRGAGDGMETEEPPKSVEVTSGVQSRKHHSLQSPWKKAVPSESP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MTTKNLETKVTVTSSPIRGAGDGMETEEPPKSVEVTSGVQSRKHHSLQSPWKKAVPSESP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GVLQLGKMLTEKAMEVKAVRILVPKAAITHDIPNKNTKVKSLGHHKGEFLGQSEGVIEPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GVLQLGKMLTEKAMEVKAVRILVPKAAITHDIPNKNTKVKSLGHHKGEFLGQSEGVIEPN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 KELSEVKNVLEKLKNSERRLLQDKEGLSNQLRVQTEVNRELKKLLVASVGDDLQYHFERL
       ::::::::::::::::::::::::::::::::::::: : :                   
CCDS81 KELSEVKNVLEKLKNSERRLLQDKEGLSNQLRVQTEVRRALIDKMSTTLYVWTF      
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KB8 AREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLASRVMADELTNSRAALQRQN




400 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:39:08 2016 done: Fri Nov  4 09:39:08 2016
 Total Scan time:  1.930 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]