Result of FASTA (omim) for
pF1KB8126
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8126, 553 aa
1>>>pF1KB8126 553 - 553 aa - 553 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6228+/-0.000457; mu= 16.9068+/- 0.028
mean_var=67.5710+/-13.921, 0's: 0 Z-trim(108.0): 23 B-trim: 693 in 1/52
Lambda= 0.156025
statistics sampled from 16057 (16079) to 16057 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.536), E-opt: 0.2 (0.189), width: 16
Scan time: 9.660
The best scores are: opt bits E(85289)
NP_004037 (OMIM: 164360,615228,616045) ATP synthas ( 553) 3485 794.1 0
NP_001001937 (OMIM: 164360,615228,616045) ATP synt ( 553) 3485 794.1 0
XP_016881278 (OMIM: 164360,615228,616045) PREDICTE ( 586) 3327 758.6 1.2e-218
NP_001001935 (OMIM: 164360,615228,616045) ATP synt ( 503) 3181 725.7 8.4e-209
NP_001244264 (OMIM: 164360,615228,616045) ATP synt ( 503) 3181 725.7 8.4e-209
NP_001244263 (OMIM: 164360,615228,616045) ATP synt ( 531) 2502 572.8 9e-163
NP_001683 (OMIM: 192132,267300) V-type proton ATPa ( 513) 393 98.1 7.1e-20
XP_011531209 (OMIM: 192132,267300) PREDICTED: V-ty ( 553) 388 97.0 1.6e-19
NP_001684 (OMIM: 124480,606939,616455) V-type prot ( 511) 387 96.8 1.8e-19
NP_001677 (OMIM: 102910) ATP synthase subunit beta ( 529) 377 94.5 8.8e-19
NP_001681 (OMIM: 607027) V-type proton ATPase cata ( 617) 236 62.8 3.6e-09
>>NP_004037 (OMIM: 164360,615228,616045) ATP synthase su (553 aa)
initn: 3485 init1: 3485 opt: 3485 Z-score: 4238.8 bits: 794.1 E(85289): 0
Smith-Waterman score: 3485; 100.0% identity (100.0% similar) in 553 aa overlap (1-553:1-553)
10 20 30 40 50 60
pF1KB8 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
490 500 510 520 530 540
550
pF1KB8 KEIVTNFLAGFEA
:::::::::::::
NP_004 KEIVTNFLAGFEA
550
>>NP_001001937 (OMIM: 164360,615228,616045) ATP synthase (553 aa)
initn: 3485 init1: 3485 opt: 3485 Z-score: 4238.8 bits: 794.1 E(85289): 0
Smith-Waterman score: 3485; 100.0% identity (100.0% similar) in 553 aa overlap (1-553:1-553)
10 20 30 40 50 60
pF1KB8 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
490 500 510 520 530 540
550
pF1KB8 KEIVTNFLAGFEA
:::::::::::::
NP_001 KEIVTNFLAGFEA
550
>>XP_016881278 (OMIM: 164360,615228,616045) PREDICTED: A (586 aa)
initn: 3327 init1: 3327 opt: 3327 Z-score: 4046.2 bits: 758.6 E(85289): 1.2e-218
Smith-Waterman score: 3327; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KB8 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRYECNCWHLFLKLC
490 500 510 520 530 540
550
pF1KB8 KEIVTNFLAGFEA
XP_016 LRYEVKIIFKSVVRLVIKTFSRSELTTCFYFQIGLMERSQNNQMQS
550 560 570 580
>>NP_001001935 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 3869.6 bits: 725.7 E(85289): 8.4e-209
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 503 aa overlap (51-553:1-503)
30 40 50 60 70 80
pF1KB8 VSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDG
::::::::::::::::::::::::::::::
NP_001 MSSILEERILGADTSVDLEETGRVLSIGDG
10 20 30
90 100 110 120 130 140
pF1KB8 IARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 PVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 PIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 KRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAY
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB8 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQY
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB8 REVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLE
400 410 420 430 440 450
510 520 530 540 550
pF1KB8 PSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
460 470 480 490 500
>>NP_001244264 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 3869.6 bits: 725.7 E(85289): 8.4e-209
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 503 aa overlap (51-553:1-503)
30 40 50 60 70 80
pF1KB8 VSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDG
::::::::::::::::::::::::::::::
NP_001 MSSILEERILGADTSVDLEETGRVLSIGDG
10 20 30
90 100 110 120 130 140
pF1KB8 IARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 PVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 PIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 KRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAY
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB8 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQY
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB8 REVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLE
400 410 420 430 440 450
510 520 530 540 550
pF1KB8 PSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
460 470 480 490 500
>>NP_001244263 (OMIM: 164360,615228,616045) ATP synthase (531 aa)
initn: 2487 init1: 2487 opt: 2502 Z-score: 3043.3 bits: 572.8 E(85289): 9e-163
Smith-Waterman score: 3291; 96.0% identity (96.0% similar) in 553 aa overlap (1-553:1-531)
10 20 30 40 50 60
pF1KB8 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
::::::::::::::::::: :::::::::::::::::::
NP_001 NDKLIKEGDIVKRTGAIVD----------------------GPIGSKTRRRVGLKAPGII
130 140 150
190 200 210 220 230 240
pF1KB8 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB8 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB8 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
460 470 480 490 500 510
550
pF1KB8 KEIVTNFLAGFEA
:::::::::::::
NP_001 KEIVTNFLAGFEA
520 530
>>NP_001683 (OMIM: 192132,267300) V-type proton ATPase s (513 aa)
initn: 261 init1: 141 opt: 393 Z-score: 477.8 bits: 98.1 E(85289): 7.1e-20
Smith-Waterman score: 393; 25.6% identity (58.3% similar) in 472 aa overlap (74-522:44-504)
50 60 70 80 90 100
pF1KB8 QKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
: :.. .. . .. .: :.:.:. .:
NP_001 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
20 30 40 50 60 70
110 120 130 140 150
pF1KB8 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
NP_001 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
80 90 100 110 120 130
160 170 180 190 200 210
pF1KB8 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
NP_001 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
140 150 160 170 180 190
220 230 240 250 260 270
pF1KB8 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
NP_001 PHNEIAAQICRQAGLVKKSKAVLDYHDDN--FAIVFAAMGVNMETARFFKSDFEQNGTMG
200 210 220 230 240
280 290 300 310 320
pF1KB8 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
NP_001 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
250 260 270 280 290 300
330 340 350 360 370 380
pF1KB8 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
NP_001 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
310 320 330 340 350 360
390 400 410 420 430 440
pF1KB8 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
NP_001 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
370 380 390 400 410 420
450 460 470 480 490 500
pF1KB8 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
:. : : . .. . : . .. : ...:: : .. :.. . : . : .. :
NP_001 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDL---GWK--LLRIFP
430 440 450 460 470 480
510 520 530 540 550
pF1KB8 SKITK-FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
... : . .: ... :.. ::
NP_001 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
490 500 510
>>XP_011531209 (OMIM: 192132,267300) PREDICTED: V-type p (553 aa)
initn: 261 init1: 141 opt: 388 Z-score: 471.3 bits: 97.0 E(85289): 1.6e-19
Smith-Waterman score: 388; 25.9% identity (58.0% similar) in 455 aa overlap (91-522:101-544)
70 80 90 100 110
pF1KB8 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGV
: :.:.:. .: . :. :.. .. :
XP_011 ASQCQLNFLGILMASKGLWNISVSATWVFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIV
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB8 VVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK
:: :.. . . . :: :. .::.:..:::: .. :. :: :::. .. . ..
XP_011 QVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDIN
140 150 160 170 180
180 190 200 210 220
pF1KB8 APGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDT------II
. : : :: .: .::::. .: . :.:::. :.. .. :: . .
XP_011 GQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 NQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQY
..: : :.. . ...:.: . :. . . . . .: . . :.: . .
XP_011 KSKAVLDYHDDN--FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB8 LAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS
..: . . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. .
XP_011 ITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLA
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB8 RLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP
. :::.... :::.: .:.. :.. :: . ::.:::... .: . : :
XP_011 TIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYP
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB8 AINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVAAF-AQFGSDLDAATQQL
::: :.::. ..: ..: .. : .. .: : : ..: :. : : . .. . :
XP_011 PINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLL
430 440 450 460 470 480
470 480 490 500 510
pF1KB8 LSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITK-FENAFLSHVVS
. .. : ...:: : .. :.. . . .: . :... : . .: ... :
XP_011 YLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----PKEMLKRIPQAVIDEFYS
490 500 510 520 530
520 530 540 550
pF1KB8 QHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
.. ::
XP_011 REGALQDLAPDTAL
540 550
>>NP_001684 (OMIM: 124480,606939,616455) V-type proton A (511 aa)
initn: 357 init1: 135 opt: 387 Z-score: 470.6 bits: 96.8 E(85289): 1.8e-19
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (94-507:70-503)
70 80 90 100 110
pF1KB8 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
:.:... .: : :. :.. ... : ::
NP_001 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
NP_001 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB8 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
NP_001 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB8 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
NP_001 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB8 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
NP_001 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB8 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
NP_001 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
340 350 360 370 380 390
420 430 440 450 460
pF1KB8 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
:.:: .: . . .:.. . : ..: :. : : . .. . : .
NP_001 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
400 410 420 430 440 450
470 480 490 500 510
pF1KB8 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
.. : .. :: : .. : . . . .: . : .. : ...:
NP_001 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
460 470 480 490 500 510
520 530 540 550
pF1KB8 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
>>NP_001677 (OMIM: 102910) ATP synthase subunit beta, mi (529 aa)
initn: 277 init1: 214 opt: 377 Z-score: 458.2 bits: 94.5 E(85289): 8.8e-19
Smith-Waterman score: 397; 24.2% identity (55.2% similar) in 562 aa overlap (5-535:7-526)
10 20 30 40
pF1KB8 MLSVRVAAAVVRALPRR---------AGLVSRNALGSSFIAARNFHASNTHLQKTGTA
::::: . . :: : :. : : .. .:.. :... :.:.:
NP_001 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAA-PTAVHPVRDYAAQTSPSPKAGAA
10 20 30 40 50
50 60 70 80 90 100
pF1KB8 EMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNL
. ..:: ..:...: :. . . .::..: . . .. .:
NP_001 TGRIV---AVIGAVVDVQFDE---------GLPPILNALEVQGRE----TRLVLEVAQHL
60 70 80 90 100
110 120 130 140 150 160
pF1KB8 EPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT
..: .... :.. :.. :. : .:: . .::: : :::.....:. :: .::: .:
NP_001 GESTVRTIAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQ
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB8 RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN
. .:: .. .: . ::::.:: :.: ..: . ..: .::: . .. : :
NP_001 FAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB8 QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA------DAMKYTIVVSATASDA
. . : : .....:.. .: ... .. :: . . .: . ..
NP_001 VAKAHGG-------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEP
230 240 250 260 270
290 300 310 320 330 340
pF1KB8 APLQYLAPYSGCSMGEYFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV
. . .: ...:::::. :. .:.. :.. . . : ..: :: : :. .: .
NP_001 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB8 FYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY
. . :: . . ::.:.. .: . : :.. :..... :. : .
NP_001 ATDMGTMQERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAE
340 350 360 370 380 390
410 420 430 440 450
pF1KB8 KGIRPAINVGLSVSRV--GSAAQTRAMKQVAGTMKLELAQYREVA-AFAQFGSD-LDAAT
:: ::.. :.::. . . .. . . :..:. : .:. . .: .: : :.
NP_001 LGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI-LQDYKSLQDIIAILGMDELSEED
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB8 QQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSK--ITKFENAF---L
. .::. .. ..:.: :. ::: ...: .. :: : : : :.. .
NP_001 KLTVSRARKIQRFLSQ----PF----QVAEVFTG---HMGKLVPLKETIKGFQQILAGEY
460 470 480 490
520 530 540 550
pF1KB8 SHVVSQHQALLGTI-----RADGKISEQSDAKLKEIVTNFLAGFEA
.:. : ..: : .:: :..:.
NP_001 DHLPEQAFYMVGPIEEAVAKAD-KLAEEHSS
500 510 520
553 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:46:35 2016 done: Fri Nov 4 09:46:36 2016
Total Scan time: 9.660 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]