Result of FASTA (omim) for
pF1KB8135
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8135, 497 aa
1>>>pF1KB8135 497 - 497 aa - 497 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2840+/-0.000321; mu= 6.0598+/- 0.020
mean_var=176.1848+/-36.270, 0's: 0 Z-trim(122.0): 159 B-trim: 942 in 1/61
Lambda= 0.096625
statistics sampled from 39223 (39398) to 39223 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.462), width: 16
Scan time: 11.630
The best scores are: opt bits E(85289)
NP_066288 (OMIM: 602635,615828) deformed epidermal ( 565) 3339 477.3 4.8e-134
XP_011518144 (OMIM: 602635,615828) PREDICTED: defo ( 551) 3111 445.6 1.8e-124
NP_001280563 (OMIM: 602635,615828) deformed epider ( 490) 1099 165.0 4.3e-40
XP_016869430 (OMIM: 133435) PREDICTED: protein CBF ( 361) 265 48.7 3.4e-05
XP_016869429 (OMIM: 133435) PREDICTED: protein CBF ( 382) 265 48.7 3.5e-05
XP_016869428 (OMIM: 133435) PREDICTED: protein CBF ( 382) 265 48.7 3.5e-05
XP_016869426 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
NP_783553 (OMIM: 133435) protein CBFA2T1 isoform C ( 567) 265 48.8 4.8e-05
XP_016869424 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
XP_016869425 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
XP_016869423 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
XP_011515655 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
XP_006716739 (OMIM: 133435) PREDICTED: protein CBF ( 567) 265 48.8 4.8e-05
NP_783554 (OMIM: 133435) protein CBFA2T1 isoform C ( 567) 265 48.8 4.8e-05
XP_016869421 (OMIM: 133435) PREDICTED: protein CBF ( 577) 265 48.8 4.9e-05
NP_004340 (OMIM: 133435) protein CBFA2T1 isoform A ( 577) 265 48.8 4.9e-05
NP_001185561 (OMIM: 133435) protein CBFA2T1 isofor ( 577) 265 48.8 4.9e-05
XP_011515654 (OMIM: 133435) PREDICTED: protein CBF ( 577) 265 48.8 4.9e-05
XP_016869422 (OMIM: 133435) PREDICTED: protein CBF ( 577) 265 48.8 4.9e-05
NP_001185554 (OMIM: 133435) protein CBFA2T1 isofor ( 577) 265 48.8 4.9e-05
NP_001185562 (OMIM: 133435) protein CBFA2T1 isofor ( 584) 265 48.8 4.9e-05
NP_783552 (OMIM: 133435) protein CBFA2T1 isoform B ( 604) 265 48.8 5.1e-05
XP_011515653 (OMIM: 133435) PREDICTED: protein CBF ( 604) 265 48.8 5.1e-05
NP_001185558 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
XP_016869420 (OMIM: 133435) PREDICTED: protein CBF ( 604) 265 48.8 5.1e-05
NP_001185559 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
NP_001185555 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
NP_001185560 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
NP_001185556 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
NP_001185557 (OMIM: 133435) protein CBFA2T1 isofor ( 604) 265 48.8 5.1e-05
NP_001185563 (OMIM: 133435) protein CBFA2T1 isofor ( 615) 265 48.8 5.1e-05
XP_016869419 (OMIM: 133435) PREDICTED: protein CBF ( 632) 265 48.9 5.3e-05
NP_001185608 (OMIM: 133435) protein CBFA2T1 isofor ( 663) 265 48.9 5.5e-05
NP_787127 (OMIM: 603870) protein CBFA2T3 isoform 2 ( 567) 250 46.7 0.00021
XP_005256380 (OMIM: 603870) PREDICTED: protein CBF ( 628) 250 46.8 0.00022
NP_005178 (OMIM: 603870) protein CBFA2T3 isoform 1 ( 653) 250 46.8 0.00023
NP_001193630 (OMIM: 604585) nuclear autoantigen Sp ( 688) 231 44.1 0.0015
NP_003104 (OMIM: 604585) nuclear autoantigen Sp-10 ( 879) 233 44.5 0.0015
XP_016883614 (OMIM: 603672) PREDICTED: protein CBF ( 377) 225 43.1 0.0017
XP_011527409 (OMIM: 603672) PREDICTED: protein CBF ( 378) 225 43.1 0.0017
XP_016883613 (OMIM: 603672) PREDICTED: protein CBF ( 378) 225 43.1 0.0017
NP_001073860 (OMIM: 604585) nuclear autoantigen Sp ( 885) 231 44.2 0.0018
XP_011527404 (OMIM: 603672) PREDICTED: protein CBF ( 574) 225 43.3 0.0023
XP_016883610 (OMIM: 603672) PREDICTED: protein CBF ( 575) 225 43.3 0.0023
NP_001034798 (OMIM: 603672) protein CBFA2T2 isofor ( 575) 225 43.3 0.0023
XP_011527405 (OMIM: 603672) PREDICTED: protein CBF ( 575) 225 43.3 0.0023
XP_016883611 (OMIM: 603672) PREDICTED: protein CBF ( 594) 225 43.3 0.0024
NP_001028171 (OMIM: 603672) protein CBFA2T2 isofor ( 595) 225 43.3 0.0024
NP_005084 (OMIM: 603672) protein CBFA2T2 isoform M ( 604) 225 43.3 0.0024
XP_011527403 (OMIM: 603672) PREDICTED: protein CBF ( 614) 225 43.3 0.0024
>>NP_066288 (OMIM: 602635,615828) deformed epidermal aut (565 aa)
initn: 3339 init1: 3339 opt: 3339 Z-score: 2527.5 bits: 477.3 E(85289): 4.8e-134
Smith-Waterman score: 3339; 100.0% identity (100.0% similar) in 497 aa overlap (1-497:69-565)
10 20 30
pF1KB8 MAAEPGHMDMGAEALPGPDEAAAAAAFAEV
::::::::::::::::::::::::::::::
NP_066 EPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB8 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB8 LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAAS
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB8 CTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 CTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB8 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
340 350 360 370 380 390
340 350 360 370 380 390
pF1KB8 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
400 410 420 430 440 450
400 410 420 430 440 450
pF1KB8 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGC
460 470 480 490 500 510
460 470 480 490
pF1KB8 HKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
:::::::::::::::::::::::::::::::::::::::::::::::
NP_066 HKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
520 530 540 550 560
>>XP_011518144 (OMIM: 602635,615828) PREDICTED: deformed (551 aa)
initn: 3111 init1: 3111 opt: 3111 Z-score: 2355.8 bits: 445.6 E(85289): 1.8e-124
Smith-Waterman score: 3111; 100.0% identity (100.0% similar) in 463 aa overlap (1-463:69-531)
10 20 30
pF1KB8 MAAEPGHMDMGAEALPGPDEAAAAAAFAEV
::::::::::::::::::::::::::::::
XP_011 EPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB8 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB8 LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAAS
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB8 CTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB8 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
340 350 360 370 380 390
340 350 360 370 380 390
pF1KB8 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
400 410 420 430 440 450
400 410 420 430 440 450
pF1KB8 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGC
460 470 480 490 500 510
460 470 480 490
pF1KB8 HKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
:::::::::::::
XP_011 HKVNYCSTFCQRKSEVLNSPAITVELSGFCFCF
520 530 540 550
>>NP_001280563 (OMIM: 602635,615828) deformed epidermal (490 aa)
initn: 2087 init1: 1099 opt: 1099 Z-score: 840.8 bits: 165.0 E(85289): 4.3e-40
Smith-Waterman score: 2374; 77.7% identity (78.9% similar) in 511 aa overlap (1-497:69-490)
10 20 30
pF1KB8 MAAEPGHMDMGAEALPGPDEAAAAAAFAEV
::::::::::::::::::::::::::::::
NP_001 EPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTVTVANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIV
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB8 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB8 LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAAS
:::: : : : : .::..
NP_001 LGSG-----------W----------------DLK--------PSRCLLH----------
220 230
220 230 240 250 260 270
pF1KB8 CTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPS
:: :: ..: .:::::
NP_001 ----LCC--------------LLRR---HDL-----------------------ITVTPS
240
280 290 300 310 320 330
pF1KB8 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQ
250 260 270 280 290 300
340 350 360 370 380 390
pF1KB8 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEE
310 320 330 340 350 360
400 410 420 430
pF1KB8 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKE--------------QSC
::::::::::::::::::::::::::::::::::::::::::: :::
NP_001 MVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEVIHPPRLPKVLGLQQSC
370 380 390 400 410 420
440 450 460 470 480 490
pF1KB8 VNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVT
430 440 450 460 470 480
pF1KB8 V
:
NP_001 V
490
>>XP_016869430 (OMIM: 133435) PREDICTED: protein CBFA2T1 (361 aa)
initn: 283 init1: 261 opt: 265 Z-score: 214.4 bits: 48.7 E(85289): 3.4e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:193-327)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
170 180 190 200 210
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
220 230 240 250 260 270
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
280 290 300 310 320 330
XP_016 DTPPAATPRSTTPGTPSTIETTPR
340 350 360
>>XP_016869429 (OMIM: 133435) PREDICTED: protein CBFA2T1 (382 aa)
initn: 283 init1: 261 opt: 265 Z-score: 214.0 bits: 48.7 E(85289): 3.5e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:214-348)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
190 200 210 220 230
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
240 250 260 270 280 290
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
300 310 320 330 340 350
XP_016 DTPPAATPRSTTPGTPSTIETTPR
360 370 380
>>XP_016869428 (OMIM: 133435) PREDICTED: protein CBFA2T1 (382 aa)
initn: 283 init1: 261 opt: 265 Z-score: 214.0 bits: 48.7 E(85289): 3.5e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:214-348)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
190 200 210 220 230
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
240 250 260 270 280 290
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
300 310 320 330 340 350
XP_016 DTPPAATPRSTTPGTPSTIETTPR
360 370 380
>>XP_016869426 (OMIM: 133435) PREDICTED: protein CBFA2T1 (567 aa)
initn: 298 init1: 261 opt: 265 Z-score: 211.5 bits: 48.8 E(85289): 4.8e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:399-533)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
430 440 450 460 470 480
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
490 500 510 520 530 540
XP_016 DTPPAATPRSTTPGTPSTIETTPR
550 560
>>NP_783553 (OMIM: 133435) protein CBFA2T1 isoform C [Ho (567 aa)
initn: 298 init1: 261 opt: 265 Z-score: 211.5 bits: 48.8 E(85289): 4.8e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:399-533)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
NP_783 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
NP_783 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
430 440 450 460 470 480
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
NP_783 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
490 500 510 520 530 540
NP_783 DTPPAATPRSTTPGTPSTIETTPR
550 560
>>XP_016869424 (OMIM: 133435) PREDICTED: protein CBFA2T1 (567 aa)
initn: 298 init1: 261 opt: 265 Z-score: 211.5 bits: 48.8 E(85289): 4.8e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:399-533)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
430 440 450 460 470 480
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
490 500 510 520 530 540
XP_016 DTPPAATPRSTTPGTPSTIETTPR
550 560
>>XP_016869425 (OMIM: 133435) PREDICTED: protein CBFA2T1 (567 aa)
initn: 298 init1: 261 opt: 265 Z-score: 211.5 bits: 48.8 E(85289): 4.8e-05
Smith-Waterman score: 265; 35.7% identity (58.6% similar) in 140 aa overlap (356-491:399-533)
330 340 350 360 370 380
pF1KB8 YPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRSW
:: . : : : : :: :... ..
XP_016 GGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEA-VN--EVKR-QAM
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 LYLEEMVNSLLNTAQQLKTLFEQAKHASTY----REAATNQAKIHADAERKEQSCVNCGR
:.. :. :... : :.:: : :.:: . . . : . .:: ::::
XP_016 TELQKAVSEAERKAHDMITT-ERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGR
430 440 450 460 470 480
450 460 470 480 490
pF1KB8 EAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
.: :.::. . ::..:::.:::. :.:::::. . :.: :. ::
XP_016 KASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPM
490 500 510 520 530 540
XP_016 DTPPAATPRSTTPGTPSTIETTPR
550 560
497 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:12:15 2016 done: Sat Nov 5 02:12:17 2016
Total Scan time: 11.630 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]