Result of FASTA (ccds) for
pF1KB8136
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8136, 433 aa
1>>>pF1KB8136 433 - 433 aa - 433 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6961+/-0.000983; mu= 10.0292+/- 0.058
mean_var=109.1388+/-22.938, 0's: 0 Z-trim(106.9): 117 B-trim: 0 in 0/51
Lambda= 0.122768
statistics sampled from 9109 (9241) to 9109 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.284), width: 16
Scan time: 2.360
The best scores are: opt bits E(32554)
CCDS13737.1 PRMT2 gene_id:3275|Hs108|chr21 ( 433) 2976 538.3 5.6e-153
CCDS68230.1 PRMT2 gene_id:3275|Hs108|chr21 ( 289) 1892 346.2 2.5e-95
CCDS56220.1 PRMT2 gene_id:3275|Hs108|chr21 ( 331) 1488 274.7 9.7e-74
CCDS74806.1 PRMT2 gene_id:3275|Hs108|chr21 ( 228) 1485 274.0 1e-73
CCDS56219.1 PRMT2 gene_id:3275|Hs108|chr21 ( 284) 1485 274.1 1.2e-73
CCDS68231.1 PRMT2 gene_id:3275|Hs108|chr21 ( 301) 1485 274.1 1.3e-73
CCDS44554.1 PRMT3 gene_id:10196|Hs108|chr11 ( 469) 732 140.9 2.6e-33
CCDS7853.1 PRMT3 gene_id:10196|Hs108|chr11 ( 531) 732 140.9 2.9e-33
CCDS41360.2 PRMT6 gene_id:55170|Hs108|chr1 ( 375) 714 137.6 2e-32
CCDS42592.1 PRMT1 gene_id:3276|Hs108|chr19 ( 353) 622 121.3 1.5e-27
CCDS12250.1 CARM1 gene_id:10498|Hs108|chr19 ( 608) 625 122.0 1.6e-27
CCDS58200.1 PRMT8 gene_id:56341|Hs108|chr12 ( 385) 619 120.8 2.4e-27
CCDS8521.2 PRMT8 gene_id:56341|Hs108|chr12 ( 394) 619 120.8 2.4e-27
CCDS46145.1 PRMT1 gene_id:3276|Hs108|chr19 ( 371) 618 120.6 2.6e-27
CCDS74425.1 PRMT1 gene_id:3276|Hs108|chr19 ( 285) 424 86.2 4.6e-17
>>CCDS13737.1 PRMT2 gene_id:3275|Hs108|chr21 (433 aa)
initn: 2976 init1: 2976 opt: 2976 Z-score: 2860.0 bits: 538.3 E(32554): 5.6e-153
Smith-Waterman score: 2976; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 SEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPT
370 380 390 400 410 420
430
pF1KB8 SQKVGEKVFPIWR
:::::::::::::
CCDS13 SQKVGEKVFPIWR
430
>>CCDS68230.1 PRMT2 gene_id:3275|Hs108|chr21 (289 aa)
initn: 1892 init1: 1892 opt: 1892 Z-score: 1825.0 bits: 346.2 E(32554): 2.5e-95
Smith-Waterman score: 1892; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
:::::::::::::::::::::::::::::::::::::
CCDS68 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKLEKKSSPSGDDS
250 260 270 280
310 320 330 340 350 360
pF1KB8 SEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLS
>>CCDS56220.1 PRMT2 gene_id:3275|Hs108|chr21 (331 aa)
initn: 1485 init1: 1485 opt: 1488 Z-score: 1437.4 bits: 274.7 E(32554): 9.7e-74
Smith-Waterman score: 2068; 76.4% identity (76.4% similar) in 433 aa overlap (1-433:1-331)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::
CCDS56 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLL----------------------
190 200 210
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
CCDS56 ------------------------------------------------------------
310 320 330 340 350 360
pF1KB8 SEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLS
::::::::::::::::::::::::::::::::::::::::
CCDS56 --------------------TLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLS
220 230 240 250
370 380 390 400 410 420
pF1KB8 TGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPT
260 270 280 290 300 310
430
pF1KB8 SQKVGEKVFPIWR
:::::::::::::
CCDS56 SQKVGEKVFPIWR
320 330
>>CCDS74806.1 PRMT2 gene_id:3275|Hs108|chr21 (228 aa)
initn: 1546 init1: 1485 opt: 1485 Z-score: 1436.9 bits: 274.0 E(32554): 1e-73
Smith-Waterman score: 1485; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::
CCDS74 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLVGEKVFPIWR
190 200 210 220
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
>>CCDS56219.1 PRMT2 gene_id:3275|Hs108|chr21 (284 aa)
initn: 1521 init1: 1485 opt: 1485 Z-score: 1435.5 bits: 274.1 E(32554): 1.2e-73
Smith-Waterman score: 1485; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::
CCDS56 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLAAPLLSCRILPCTCASGPLHVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
CCDS56 LACCLPLPCTCASVPLHVLLACCLPVLRAPQPSGLHLSWPIFLL
250 260 270 280
>>CCDS68231.1 PRMT2 gene_id:3275|Hs108|chr21 (301 aa)
initn: 1485 init1: 1485 opt: 1485 Z-score: 1435.1 bits: 274.1 E(32554): 1.3e-73
Smith-Waterman score: 1485; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB8 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 MATSGDCPRSESQGEEPAECSEAGLLQEGVQPEEFVAIADYAATDETQLSFLRGEKILIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 RQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 RTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVI
::::::::::::::::::::::::::::::::::::::
CCDS68 LQNGFADIITVYQQKVEDVVLPEKVDVLVSEWMGTCLLHHTLEADAVHDGRPSPCPYRRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 WPTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCL
CCDS68 GHGFSCVAEKPSVEKAHVCGSELGCHFQTRPHISKSWRKSLPHLEMTVDALFGKQCAYLE
250 260 270 280 290 300
>>CCDS44554.1 PRMT3 gene_id:10196|Hs108|chr11 (469 aa)
initn: 549 init1: 430 opt: 732 Z-score: 711.5 bits: 140.9 E(32554): 2.6e-33
Smith-Waterman score: 732; 37.3% identity (69.6% similar) in 319 aa overlap (95-410:149-458)
70 80 90 100 110 120
pF1KB8 ADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEE--YFGSYGTLKLHLEMLADQPRT
: .::. ::.::: .: ::: :. ::
CCDS44 EDLQKMKQFAQDFVMHTDVRTCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRT
120 130 140 150 160 170
130 140 150 160 170 180
pF1KB8 TKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLVLQ
.:.. : :: . . :::.:::::::::.:.: :. : . : .:. ::. .. ...
CCDS44 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRL
180 190 200 210 220 230
190 200 210 220 230 240
pF1KB8 NGFADIITVYQQKVEDVVLP-EKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVIW
: . : ::. . :.:.: :: :::::..::::: :::: :..:.:::.. .: . : ..
CCDS44 NKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB8 PTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCLS
: . .. :: : . . ... :::..: :..: .:. .. : ..: :. .:
CCDS44 PDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKAVIPE-----AVVEVLDPKTLIS
300 310 320 330 340 350
310 320 330 340 350 360
pF1KB8 EPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLST
::: : ..: .:..::::: . ... . : ... .....:...:. .. . :.::
CCDS44 EPCGIKHIDCHTTSISDLE-FSSDFTLKITRTSMCTAIAGYFDIYFE--KNCHNRVVFST
360 370 380 390 400
370 380 390 400 410 420
pF1KB8 GPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPTS
:: ::::::.:... : :..:... :.:....: : ..:.:.
CCDS44 GPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNNSTQTYGLQ
410 420 430 440 450 460
430
pF1KB8 QKVGEKVFPIWR
>>CCDS7853.1 PRMT3 gene_id:10196|Hs108|chr11 (531 aa)
initn: 549 init1: 430 opt: 732 Z-score: 710.7 bits: 140.9 E(32554): 2.9e-33
Smith-Waterman score: 732; 37.3% identity (69.6% similar) in 319 aa overlap (95-410:211-520)
70 80 90 100 110 120
pF1KB8 ADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEE--YFGSYGTLKLHLEMLADQPRT
: .::. ::.::: .: ::: :. ::
CCDS78 EDLQKMKQFAQDFVMHTDVRTCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRT
190 200 210 220 230 240
130 140 150 160 170 180
pF1KB8 TKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLVLQ
.:.. : :: . . :::.:::::::::.:.: :. : . : .:. ::. .. ...
CCDS78 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRL
250 260 270 280 290
190 200 210 220 230 240
pF1KB8 NGFADIITVYQQKVEDVVLP-EKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVIW
: . : ::. . :.:.: :: :::::..::::: :::: :..:.:::.. .: . : ..
CCDS78 NKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY
300 310 320 330 340 350
250 260 270 280 290 300
pF1KB8 PTMAALHLVPCSADKDYRSKVLFWDNAYEFNLSALKSLAVKEFFSKPKYNHILKPEDCLS
: . .. :: : . . ... :::..: :..: .:. .. : ..: :. .:
CCDS78 PDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKAVIPE-----AVVEVLDPKTLIS
360 370 380 390 400 410
310 320 330 340 350 360
pF1KB8 EPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLST
::: : ..: .:..::::: . ... . : ... .....:...:. .. . :.::
CCDS78 EPCGIKHIDCHTTSISDLE-FSSDFTLKITRTSMCTAIAGYFDIYFE--KNCHNRVVFST
420 430 440 450 460 470
370 380 390 400 410 420
pF1KB8 GPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWAVTSRQDPTS
:: ::::::.:... : :..:... :.:....: : ..:.:.
CCDS78 GPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNNSTQTYGLQ
480 490 500 510 520 530
430
pF1KB8 QKVGEKVFPIWR
>>CCDS41360.2 PRMT6 gene_id:55170|Hs108|chr1 (375 aa)
initn: 649 init1: 278 opt: 714 Z-score: 695.7 bits: 137.6 E(32554): 2e-32
Smith-Waterman score: 714; 38.9% identity (68.4% similar) in 332 aa overlap (98-420:43-368)
70 80 90 100 110 120
pF1KB8 WWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLEMLADQPRTTKYHS
.:. :. :. ...: ::.::. :: :.
CCDS41 GGGEGGEGTEEEDGAEREAALERPRRTKRERDQLYYECYSDVSVHEEMIADRVRTDAYRL
20 30 40 50 60 70
130 140 150 160 170 180
pF1KB8 VILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQHTGQLVLQNGFAD
::.: .: :..:::: ::::.:.:::. : : ::::::: . :.. ..: ::. :
CCDS41 GILRNWAALRGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASAIWQQAREVVRFNGLED
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB8 IITVYQQKVEDVVLPEKVDVLVSEWMGTCLLFEFMIESILYARDAWLKEDGVIWPTMAAL
. : :: : :::.::..:::::: :: : :. :.:.:: :::: :.. :. : :
CCDS41 RVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAEL
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB8 HLVPCSADKDYRSKVLFWDNA---YEFNLSALKSLAVKEFFSKPKYN-HILKPEDCLSEP
..: : :. . .. ::... : ..: :...:.. .... . . :. :: :..:
CCDS41 FIAPIS-DQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARP
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB8 CTILQLDMRTVQI-SDLET-LRGELRFDIRKAGTLHGFTAWFSVHFQSLQEGQPPQVLST
. ::.. . . ..::. . :..: . .. .:::. ::.: : . :.. : ::::
CCDS41 QRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPG-GESEKPLVLST
260 270 280 290 300
370 380 390 400 410
pF1KB8 GPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVL---QRNPVWRRHMSVALSWAVTSRQD
.::::.:::::.:.....:: :. :.: ..: . :: :.. : : . : ....
CCDS41 SPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNP---RRLRVLLRYKVGDQEE
310 320 330 340 350 360
420 430
pF1KB8 PTSQKVGEKVFPIWR
:
CCDS41 KTKDFAMED
370
>>CCDS42592.1 PRMT1 gene_id:3276|Hs108|chr19 (353 aa)
initn: 533 init1: 415 opt: 622 Z-score: 608.0 bits: 121.3 E(32554): 1.5e-27
Smith-Waterman score: 732; 34.3% identity (68.6% similar) in 341 aa overlap (71-409:5-333)
50 60 70 80 90 100
pF1KB8 YAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDE
: :.: . ... . .. . :: . .
CCDS42 MAAAEAANCIMEVSCGQA-ESSEKPNAEDMTSKD
10 20 30
110 120 130 140 150 160
pF1KB8 EYFGSYGTLKLHLEMLADQPRTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYAR
:: ::. . .: ::: :. :: :.. ...:.. . :::.:::: ::::. .: :. :
CCDS42 YYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAK-AG
40 50 60 70 80 90
170 180 190 200 210
pF1KB8 PRAVYAVEASEMAQHTGQLVLQNGFADIITVYQQKVEDVVLP-EKVDVLVSEWMGTCLLF
: : ..: : ..... ..: : . ..:. . :::.: :: ::::...::::: ::..
CCDS42 ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFY
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB8 EFMIESILYARDAWLKEDGVIWPTMAALHLVPCSADKDYRS-KVLFWDNAYEFNLSALKS
: :....::::: :: ::.:.: :.:. : :..:.. :. .:.:.: :..: .:.
CCDS42 ESMLNTVLYARDKWLAPDGLIFPDRATLY-VTAIEDRQYKDYKIHWWENVYGFDMSCIKD
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB8 LAVKEFFSKPKYNHILKPEDCLSEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHG
.:.:: : . .. :.. ... : : ..:. ::.. :: :. . . ..... .:.
CCDS42 VAIKE----PLVD-VVDPKQLVTNACLIKEVDIYTVKVEDL-TFTSPFCLQVKRNDYVHA
220 230 240 250 260
340 350 360 370 380 390
pF1KB8 FTAWFSVHFQSLQEGQPPQVLSTGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRN
..:.:...: .. .::.: : ::::::.:.:.: . :.::. . :.. .. :
CCDS42 LVAYFNIEFTRCHKRTG---FSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPN
270 280 290 300 310 320
400 410 420 430
pF1KB8 PVWRRHMSVALSWAVTSRQDPTSQKVGEKVFPIWR
: .. ..
CCDS42 AKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
330 340 350
433 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:52:17 2016 done: Fri Nov 4 09:52:18 2016
Total Scan time: 2.360 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]