Result of FASTA (omim) for
pF1KB8139
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8139, 326 aa
1>>>pF1KB8139 326 - 326 aa - 326 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7513+/-0.000378; mu= 13.2034+/- 0.023
mean_var=76.6194+/-15.205, 0's: 0 Z-trim(112.6): 72 B-trim: 0 in 0/49
Lambda= 0.146523
statistics sampled from 21526 (21598) to 21526 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.253), width: 16
Scan time: 4.760
The best scores are: opt bits E(85289)
NP_060580 (OMIM: 608333) docking protein 4 isoform ( 326) 2214 477.7 1.4e-134
XP_005256100 (OMIM: 608333) PREDICTED: docking pro ( 326) 2214 477.7 1.4e-134
NP_001317485 (OMIM: 608333) docking protein 4 isof ( 365) 1978 427.8 1.6e-119
NP_689934 (OMIM: 611402) docking protein 6 [Homo s ( 331) 1422 310.3 3.6e-84
XP_011524177 (OMIM: 611402) PREDICTED: docking pro ( 289) 1395 304.5 1.7e-82
NP_060901 (OMIM: 608334) docking protein 5 isoform ( 306) 1242 272.2 9.7e-73
XP_016881100 (OMIM: 611402) PREDICTED: docking pro ( 223) 897 199.2 6.7e-51
XP_016881099 (OMIM: 611402) PREDICTED: docking pro ( 223) 897 199.2 6.7e-51
NP_808874 (OMIM: 608334) docking protein 5 isoform ( 198) 756 169.4 5.6e-42
XP_011527206 (OMIM: 608334) PREDICTED: docking pro ( 198) 756 169.4 5.6e-42
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 222 56.7 1.1e-07
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 222 56.7 1.1e-07
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 211 54.3 4.3e-07
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 211 54.3 4.3e-07
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318) 209 53.9 5.4e-07
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412) 209 53.9 6.7e-07
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258) 203 52.5 1.1e-06
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258) 203 52.5 1.1e-06
NP_006644 (OMIM: 607744) fibroblast growth factor ( 492) 176 47.0 9.8e-05
XP_011512557 (OMIM: 607744) PREDICTED: fibroblast ( 492) 176 47.0 9.8e-05
XP_011512556 (OMIM: 607744) PREDICTED: fibroblast ( 492) 176 47.0 9.8e-05
XP_016865682 (OMIM: 607744) PREDICTED: fibroblast ( 455) 175 46.8 0.00011
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338) 165 44.6 0.00036
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395) 165 44.6 0.00041
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440) 165 44.6 0.00045
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440) 165 44.6 0.00045
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440) 165 44.6 0.00045
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440) 165 44.6 0.00045
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440) 165 44.6 0.00045
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440) 165 44.6 0.00045
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496) 165 44.7 0.0005
NP_001265282 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
NP_001036020 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
XP_016874208 (OMIM: 607743) PREDICTED: fibroblast ( 508) 158 43.2 0.0014
NP_001265280 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
NP_001265283 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
NP_001265285 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
NP_006645 (OMIM: 607743) fibroblast growth factor ( 508) 158 43.2 0.0014
NP_001265284 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
NP_001265286 (OMIM: 607743) fibroblast growth fact ( 508) 158 43.2 0.0014
XP_016874207 (OMIM: 607743) PREDICTED: fibroblast ( 508) 158 43.2 0.0014
XP_016874206 (OMIM: 607743) PREDICTED: fibroblast ( 508) 158 43.2 0.0014
>>NP_060580 (OMIM: 608333) docking protein 4 isoform 1 [ (326 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 2536.9 bits: 477.7 E(85289): 1.4e-134
Smith-Waterman score: 2214; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
250 260 270 280 290 300
310 320
pF1KB8 DLLNRFILLKPKPSQGDSSEAKTPSQ
::::::::::::::::::::::::::
NP_060 DLLNRFILLKPKPSQGDSSEAKTPSQ
310 320
>>XP_005256100 (OMIM: 608333) PREDICTED: docking protein (326 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 2536.9 bits: 477.7 E(85289): 1.4e-134
Smith-Waterman score: 2214; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
250 260 270 280 290 300
310 320
pF1KB8 DLLNRFILLKPKPSQGDSSEAKTPSQ
::::::::::::::::::::::::::
XP_005 DLLNRFILLKPKPSQGDSSEAKTPSQ
310 320
>>NP_001317485 (OMIM: 608333) docking protein 4 isoform (365 aa)
initn: 1978 init1: 1978 opt: 1978 Z-score: 2266.6 bits: 427.8 E(85289): 1.6e-119
Smith-Waterman score: 2082; 89.1% identity (89.1% similar) in 358 aa overlap (1-319:1-358)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
250 260 270 280
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGE-----------
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGESLPCPTPTCQE
250 260 270 280 290 300
290 300 310 320
pF1KB8 ----------------------------GYGAAQASSETDLLNRFILLKPKPSQGDSSEA
::::::::::::::::::::::::::::::
NP_001 ALWRMRPIGQGSFDLALSSEPASVPTGEGYGAAQASSETDLLNRFILLKPKPSQGDSSEA
310 320 330 340 350 360
pF1KB8 KTPSQ
NP_001 KTPSQ
>>NP_689934 (OMIM: 611402) docking protein 6 [Homo sapie (331 aa)
initn: 1423 init1: 1308 opt: 1422 Z-score: 1632.0 bits: 310.3 E(85289): 3.6e-84
Smith-Waterman score: 1423; 63.9% identity (84.9% similar) in 324 aa overlap (1-324:1-314)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::.::.:::::::::..::::::.:::::::.:.:::::.::::.::::.. .:. :::
NP_689 MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
:. :.: .::::.:::..:::::: :....::.:.:::::::: : : .::::.::::::
NP_689 ELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
:::::::: ::: ::..::::.:.: ::::.:::: .:::::::::::::: .:::: ::
NP_689 LGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
: ::::::::.: ::::.:::::.::::.::::.:::.:::.::::::::::::.:..::
NP_689 LSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
::...:: .. :: .. . . ::::::::::: .....: : :.:.:... :
NP_689 MEQKARLQTSLTEPMTL--SKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQ
250 260 270 280 290
310 320
pF1KB8 DLLNRFILLKPKPSQGDSSEAKTPSQ
. :. . .: ::. :
NP_689 TF--------PSYAPEQSEEAQQPLSRSSSYGFSYSSSLIQ
300 310 320 330
>>XP_011524177 (OMIM: 611402) PREDICTED: docking protein (289 aa)
initn: 1396 init1: 1308 opt: 1395 Z-score: 1602.1 bits: 304.5 E(85289): 1.7e-82
Smith-Waterman score: 1395; 68.9% identity (89.3% similar) in 289 aa overlap (1-289:1-287)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::.::.:::::::::..::::::.:::::::.:.:::::.::::.::::.. .:. :::
XP_011 MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
:. :.: .::::.:::..:::::: :....::.:.:::::::: : : .::::.::::::
XP_011 ELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
:::::::: ::: ::..::::.:.: ::::.:::: .:::::::::::::: .:::: ::
XP_011 LGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
: ::::::::.: ::::.:::::.::::.::::.:::.:::.::::::::::::.:..::
XP_011 LSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
::...:: .. :: .. . . ::::::::::: .....: : :.
XP_011 MEQKARLQTSLTEPMTL--SKSISLPRSAYWHHITRQNSVGEIYSLQGKSL
250 260 270 280
310 320
pF1KB8 DLLNRFILLKPKPSQGDSSEAKTPSQ
>>NP_060901 (OMIM: 608334) docking protein 5 isoform a [ (306 aa)
initn: 1238 init1: 1176 opt: 1242 Z-score: 1426.9 bits: 272.2 E(85289): 9.7e-73
Smith-Waterman score: 1242; 64.7% identity (87.6% similar) in 275 aa overlap (1-275:1-273)
10 20 30 40 50 60
pF1KB8 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
::.::.::::::::...::.::::.::::::.:.:::::.::::. ::... .: :::
NP_060 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
:..::: :.:::: ::..:..: :.::...::.:.:.:::.:: :.:..::.:.:.::::
NP_060 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
:::::::: ::. ::..::::.:.: :::::.::: ::::.: : :::..::::::.:::
NP_060 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
: .:::::::.: :::::::::..::::. :::..:: :::.::::.:::::::.: ::.
NP_060 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQ
190 200 210 220 230
250 260 270 280 290 300
pF1KB8 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
:: : : .:. . . . :::::::.:::
NP_060 SVKNSMLQMKMSER-AASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTET
240 250 260 270 280 290
310 320
pF1KB8 DLLNRFILLKPKPSQGDSSEAKTPSQ
NP_060 FPAYRSEH
300
>>XP_016881100 (OMIM: 611402) PREDICTED: docking protein (223 aa)
initn: 898 init1: 783 opt: 897 Z-score: 1034.9 bits: 199.2 E(85289): 6.7e-51
Smith-Waterman score: 898; 61.6% identity (81.5% similar) in 216 aa overlap (109-324:1-206)
80 90 100 110 120 130
pF1KB8 AVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDR
.::::.:::::::::::::: ::: ::..:
XP_016 MECLGTRLNDISLGEPDLLAAGVQREQNER
10 20 30
140 150 160 170 180 190
pF1KB8 FNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEA
:::.:.: ::::.:::: .:::::::::::::: .:::: ::: ::::::::.: ::::.
XP_016 FNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFES
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 GRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYP
:::::.::::.::::.:::.:::.::::::::::::.:..::::...:: .. :: ..
XP_016 GRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTL-
100 110 120 130 140
260 270 280 290 300 310
pF1KB8 CTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSETDLLNRFILLKPKPSQGDS
. . ::::::::::: .....: : :.:.:... : . :. . .:
XP_016 -SKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQTF--------PSYAPEQS
150 160 170 180 190 200
320
pF1KB8 SEAKTPSQ
::. :
XP_016 EEAQQPLSRSSSYGFSYSSSLIQ
210 220
>>XP_016881099 (OMIM: 611402) PREDICTED: docking protein (223 aa)
initn: 898 init1: 783 opt: 897 Z-score: 1034.9 bits: 199.2 E(85289): 6.7e-51
Smith-Waterman score: 898; 61.6% identity (81.5% similar) in 216 aa overlap (109-324:1-206)
80 90 100 110 120 130
pF1KB8 AVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDR
.::::.:::::::::::::: ::: ::..:
XP_016 MECLGTRLNDISLGEPDLLAAGVQREQNER
10 20 30
140 150 160 170 180 190
pF1KB8 FNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEA
:::.:.: ::::.:::: .:::::::::::::: .:::: ::: ::::::::.: ::::.
XP_016 FNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFES
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 GRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYP
:::::.::::.::::.:::.:::.::::::::::::.:..::::...:: .. :: ..
XP_016 GRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTL-
100 110 120 130 140
260 270 280 290 300 310
pF1KB8 CTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSETDLLNRFILLKPKPSQGDS
. . ::::::::::: .....: : :.:.:... : . :. . .:
XP_016 -SKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQTF--------PSYAPEQS
150 160 170 180 190 200
320
pF1KB8 SEAKTPSQ
::. :
XP_016 EEAQQPLSRSSSYGFSYSSSLIQ
210 220
>>NP_808874 (OMIM: 608334) docking protein 5 isoform b [ (198 aa)
initn: 751 init1: 689 opt: 756 Z-score: 874.6 bits: 169.4 E(85289): 5.6e-42
Smith-Waterman score: 756; 66.9% identity (85.2% similar) in 169 aa overlap (109-275:1-165)
80 90 100 110 120 130
pF1KB8 AVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDR
.::.:.:.:::::::::::: ::. ::..:
NP_808 MECVGTRINDISLGEPDLLATGVEREQSER
10 20 30
140 150 160 170 180 190
pF1KB8 FNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEA
:::.:.: :::::.::: ::::.: : :::..::::::.:::: .:::::::.: :::::
NP_808 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 GRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYP
::::..::::. :::..:: :::.::::.:::::::.: ::. :: : : .:. .
NP_808 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQSVKNSMLQMKMSERAA--
100 110 120 130 140
260 270 280 290 300 310
pF1KB8 CTPTTM--LPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSETDLLNRFILLKPKPSQG
. .:: :::::::.:::
NP_808 -SLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
150 160 170 180 190
>>XP_011527206 (OMIM: 608334) PREDICTED: docking protein (198 aa)
initn: 751 init1: 689 opt: 756 Z-score: 874.6 bits: 169.4 E(85289): 5.6e-42
Smith-Waterman score: 756; 66.9% identity (85.2% similar) in 169 aa overlap (109-275:1-165)
80 90 100 110 120 130
pF1KB8 AVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDR
.::.:.:.:::::::::::: ::. ::..:
XP_011 MECVGTRINDISLGEPDLLATGVEREQSER
10 20 30
140 150 160 170 180 190
pF1KB8 FNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEA
:::.:.: :::::.::: ::::.: : :::..::::::.:::: .:::::::.: :::::
XP_011 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 GRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYP
::::..::::. :::..:: :::.::::.:::::::.: ::. :: : : .:. .
XP_011 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQSVKNSMLQMKMSERAA--
100 110 120 130 140
260 270 280 290 300 310
pF1KB8 CTPTTM--LPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSETDLLNRFILLKPKPSQG
. .:: :::::::.:::
XP_011 -SLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
150 160 170 180 190
326 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:55:47 2016 done: Fri Nov 4 09:55:48 2016
Total Scan time: 4.760 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]