Result of FASTA (omim) for
pF1KB8145
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8145, 308 aa
1>>>pF1KB8145 308 - 308 aa - 308 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0903+/-0.000357; mu= 3.5841+/- 0.023
mean_var=170.3232+/-34.211, 0's: 0 Z-trim(120.0): 14 B-trim: 277 in 1/52
Lambda= 0.098274
statistics sampled from 34677 (34691) to 34677 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.407), width: 16
Scan time: 5.000
The best scores are: opt bits E(85289)
NP_037392 (OMIM: 610218) SAP30-binding protein iso ( 308) 1973 291.3 1.6e-78
XP_016880036 (OMIM: 610218) PREDICTED: SAP30-bindi ( 266) 1513 226.1 6.3e-59
XP_011522995 (OMIM: 610218) PREDICTED: SAP30-bindi ( 335) 1477 221.0 2.6e-57
NP_001288768 (OMIM: 610218) SAP30-binding protein ( 292) 1448 216.9 4e-56
NP_001288784 (OMIM: 610218) SAP30-binding protein ( 342) 1412 211.8 1.6e-54
XP_016880035 (OMIM: 610218) PREDICTED: SAP30-bindi ( 286) 1406 210.9 2.4e-54
XP_016880038 (OMIM: 610218) PREDICTED: SAP30-bindi ( 197) 1256 189.5 4.6e-48
XP_016880034 (OMIM: 610218) PREDICTED: SAP30-bindi ( 293) 1017 155.8 1e-37
XP_011522996 (OMIM: 610218) PREDICTED: SAP30-bindi ( 319) 952 146.6 6.3e-35
XP_011522997 (OMIM: 610218) PREDICTED: SAP30-bindi ( 313) 910 140.6 3.9e-33
XP_016880037 (OMIM: 610218) PREDICTED: SAP30-bindi ( 224) 760 119.2 7.5e-27
XP_016880039 (OMIM: 610218) PREDICTED: SAP30-bindi ( 158) 508 83.4 3.2e-16
>>NP_037392 (OMIM: 610218) SAP30-binding protein isoform (308 aa)
initn: 1973 init1: 1973 opt: 1973 Z-score: 1530.5 bits: 291.3 E(85289): 1.6e-78
Smith-Waterman score: 1973; 100.0% identity (100.0% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KB8 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVG
250 260 270 280 290 300
pF1KB8 TIVKKAKQ
::::::::
NP_037 TIVKKAKQ
>>XP_016880036 (OMIM: 610218) PREDICTED: SAP30-binding p (266 aa)
initn: 1513 init1: 1513 opt: 1513 Z-score: 1179.0 bits: 226.1 E(85289): 6.3e-59
Smith-Waterman score: 1513; 100.0% identity (100.0% similar) in 236 aa overlap (73-308:31-266)
50 60 70 80 90 100
pF1KB8 SDAYGEDDFSRLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV
::::::::::::::::::::::::::::::
XP_016 MFCRLSQFTRKIQSPSLMARLESRRWAARLEDDDSETEKPEADDPKDNTEAEKRDPQELV
10 20 30 40 50 60
110 120 130 140 150 160
pF1KB8 ASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNP
70 80 90 100 110 120
170 180 190 200 210 220
pF1KB8 SIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIE
130 140 150 160 170 180
230 240 250 260 270 280
pF1KB8 FVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVV
190 200 210 220 230 240
290 300
pF1KB8 TVTTSASGSKTTVISAVGTIVKKAKQ
::::::::::::::::::::::::::
XP_016 TVTTSASGSKTTVISAVGTIVKKAKQ
250 260
>>XP_011522995 (OMIM: 610218) PREDICTED: SAP30-binding p (335 aa)
initn: 1959 init1: 1467 opt: 1477 Z-score: 1150.0 bits: 221.0 E(85289): 2.6e-57
Smith-Waterman score: 1909; 91.9% identity (91.9% similar) in 335 aa overlap (1-308:1-335)
10 20 30 40 50 60
pF1KB8 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
130 140 150 160 170 180
190 200 210 220
pF1KB8 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTK--------------------
::::::::::::::::::::::::::::::::::::::::
XP_011 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKACCRDVSAAPGDRSCPSPVR
190 200 210 220 230 240
230 240 250 260 270
pF1KB8 -------IEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILT
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTASSWIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILT
250 260 270 280 290 300
280 290 300
pF1KB8 TTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
:::::::::::::::::::::::::::::::::::
XP_011 TTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
310 320 330
>>NP_001288768 (OMIM: 610218) SAP30-binding protein isof (292 aa)
initn: 1433 init1: 1433 opt: 1448 Z-score: 1128.6 bits: 216.9 E(85289): 4e-56
Smith-Waterman score: 1820; 94.8% identity (94.8% similar) in 308 aa overlap (1-308:1-292)
10 20 30 40 50 60
pF1KB8 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
:::::::::::: ::::::::::::::::::::::::::::::::
NP_001 YEEEEDENSRQS----------------DNTEAEKRDPQELVASFSERVRNMSPDEIKIP
70 80 90 100
130 140 150 160 170 180
pF1KB8 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 TTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVG
230 240 250 260 270 280
pF1KB8 TIVKKAKQ
::::::::
NP_001 TIVKKAKQ
290
>>NP_001288784 (OMIM: 610218) SAP30-binding protein isof (342 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1100.0 bits: 211.8 E(85289): 1.6e-54
Smith-Waterman score: 1883; 90.0% identity (90.0% similar) in 340 aa overlap (3-308:3-342)
10 20 30 40 50 60
pF1KB8 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
10 20 30 40 50 60
70 80
pF1KB8 YEEEEDENSRQSEDDDSETEKPEADDPK--------------------------------
::::::::::::::::::::::::::::
NP_001 YEEEEDENSRQSEDDDSETEKPEADDPKEKLGTVTEAPRAQQAHGPACWTQRAEESHSKH
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 --DNTEAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKDNTEAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEG
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 MDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKI
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB8 EMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTI
250 260 270 280 290 300
270 280 290 300
pF1KB8 AQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
::::::::::::::::::::::::::::::::::::::::::
NP_001 AQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
310 320 330 340
>>XP_016880035 (OMIM: 610218) PREDICTED: SAP30-binding p (286 aa)
initn: 1406 init1: 1406 opt: 1406 Z-score: 1096.5 bits: 210.9 E(85289): 2.4e-54
Smith-Waterman score: 1406; 98.2% identity (98.7% similar) in 226 aa overlap (83-308:61-286)
60 70 80 90 100 110
pF1KB8 RLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNM
:: .::::::::::::::::::::::::
XP_016 AHTPHTPFHLQVHKSHKKPRGGSWPLTLPKEALKWQDNTEAEKRDPQELVASFSERVRNM
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 SPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFC
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB8 AIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB8 TNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSK
220 230 240 250 260 270
300
pF1KB8 TTVISAVGTIVKKAKQ
::::::::::::::::
XP_016 TTVISAVGTIVKKAKQ
280
>>XP_016880038 (OMIM: 610218) PREDICTED: SAP30-binding p (197 aa)
initn: 1256 init1: 1256 opt: 1256 Z-score: 983.9 bits: 189.5 E(85289): 4.6e-48
Smith-Waterman score: 1256; 100.0% identity (100.0% similar) in 197 aa overlap (112-308:1-197)
90 100 110 120 130 140
pF1KB8 PEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYER
::::::::::::::::::::::::::::::
XP_016 MSPDEIKIPPEPPGRCSNHLQDKIQKLYER
10 20 30
150 160 170 180 190 200
pF1KB8 KIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALA
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB8 KAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAI
100 110 120 130 140 150
270 280 290 300
pF1KB8 PVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
160 170 180 190
>>XP_016880034 (OMIM: 610218) PREDICTED: SAP30-binding p (293 aa)
initn: 1499 init1: 1007 opt: 1017 Z-score: 798.3 bits: 155.8 E(85289): 1e-37
Smith-Waterman score: 1449; 89.7% identity (89.7% similar) in 263 aa overlap (73-308:31-293)
50 60 70 80 90 100
pF1KB8 SDAYGEDDFSRLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV
::::::::::::::::::::::::::::::
XP_016 MFCRLSQFTRKIQSPSLMARLESRRWAARLEDDDSETEKPEADDPKDNTEAEKRDPQELV
10 20 30 40 50 60
110 120 130 140 150 160
pF1KB8 ASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNP
70 80 90 100 110 120
170 180 190 200 210 220
pF1KB8 SIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTK--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKAC
130 140 150 160 170 180
230 240 250
pF1KB8 -------------------------IEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKS
:::::::::::::::::::::::::::::::::::
XP_016 CRDVSAAPGDRSCPSPVRAGTASSWIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKS
190 200 210 220 230 240
260 270 280 290 300
pF1KB8 KWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KWDSAIPVTTIAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
250 260 270 280 290
>>XP_011522996 (OMIM: 610218) PREDICTED: SAP30-binding p (319 aa)
initn: 1419 init1: 927 opt: 952 Z-score: 748.0 bits: 146.6 E(85289): 6.3e-35
Smith-Waterman score: 1756; 87.2% identity (87.2% similar) in 335 aa overlap (1-308:1-319)
10 20 30 40 50 60
pF1KB8 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 YEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIP
:::::::::::: ::::::::::::::::::::::::::::::::
XP_011 YEEEEDENSRQS----------------DNTEAEKRDPQELVASFSERVRNMSPDEIKIP
70 80 90 100
130 140 150 160 170 180
pF1KB8 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTN
110 120 130 140 150 160
190 200 210 220
pF1KB8 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTK--------------------
::::::::::::::::::::::::::::::::::::::::
XP_011 YPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKACCRDVSAAPGDRSCPSPVR
170 180 190 200 210 220
230 240 250 260 270
pF1KB8 -------IEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILT
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTASSWIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILT
230 240 250 260 270 280
280 290 300
pF1KB8 TTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
:::::::::::::::::::::::::::::::::::
XP_011 TTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
290 300 310
>>XP_011522997 (OMIM: 610218) PREDICTED: SAP30-binding p (313 aa)
initn: 1392 init1: 900 opt: 910 Z-score: 715.9 bits: 140.6 E(85289): 3.9e-33
Smith-Waterman score: 1342; 87.7% identity (88.1% similar) in 253 aa overlap (83-308:61-313)
60 70 80 90 100 110
pF1KB8 RLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNM
:: .::::::::::::::::::::::::
XP_011 AHTPHTPFHLQVHKSHKKPRGGSWPLTLPKEALKWQDNTEAEKRDPQELVASFSERVRNM
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 SPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFC
100 110 120 130 140 150
180 190 200 210 220
pF1KB8 AIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTK------------
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKACCRDVSAAPGD
160 170 180 190 200 210
230 240 250 260
pF1KB8 ---------------IEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTT
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSCPSPVRAGTASSWIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTT
220 230 240 250 260 270
270 280 290 300
pF1KB8 IAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
:::::::::::::::::::::::::::::::::::::::::::
XP_011 IAQPTILTTTATLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ
280 290 300 310
308 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:59:03 2016 done: Fri Nov 4 09:59:03 2016
Total Scan time: 5.000 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]