FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8178, 435 aa
  1>>>pF1KB8178 435 - 435 aa - 435 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.0700+/-0.0013; mu= -10.9163+/- 0.074
 mean_var=438.6381+/-130.244, 0's: 0 Z-trim(108.3): 57  B-trim: 532 in 1/50
 Lambda= 0.061238
 statistics sampled from 10108 (10152) to 10108 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.312), width:  16
 Scan time:  2.700

The best scores are:                                      opt bits E(32554)
CCDS9765.1 ZBTB25 gene_id:7597|Hs108|chr14         ( 435) 2926 273.6 2.7e-73
CCDS5231.1 ZBTB2 gene_id:57621|Hs108|chr6          ( 514)  652 72.7 9.2e-13


>>CCDS9765.1 ZBTB25 gene_id:7597|Hs108|chr14              (435 aa)
 initn: 2926 init1: 2926 opt: 2926  Z-score: 1429.3  bits: 273.6 E(32554): 2.7e-73
Smith-Waterman score: 2926; 100.0% identity (100.0% similar) in 435 aa overlap (1-435:1-435)

               10        20        30        40        50        60
pF1KB8 MDTASHSLVLLQQLNMQREFGFLCDCTVAIGDVYFKAHRAVLAAFSNYFKMIFIHQTSEC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MDTASHSLVLLQQLNMQREFGFLCDCTVAIGDVYFKAHRAVLAAFSNYFKMIFIHQTSEC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IKIQPTDIQPDIFSYLLHIMYTGKGPKQIVDHSRLEEGIRFLHADYLSHIATEMNQVFSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IKIQPTDIQPDIFSYLLHIMYTGKGPKQIVDHSRLEEGIRFLHADYLSHIATEMNQVFSP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ETVQSSNLYGIQISTTQKTVVKQGLEVKEAPSSNSGNRAAVQGDHPQLQLSLAIGLDDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ETVQSSNLYGIQISTTQKTVVKQGLEVKEAPSSNSGNRAAVQGDHPQLQLSLAIGLDDGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ADQQRACPATQALEEHQKPPVSIKQERCDPESVISQSHPSPSSEVTGPTFTENSVKIHLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ADQQRACPATQALEEHQKPPVSIKQERCDPESVISQSHPSPSSEVTGPTFTENSVKIHLC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HYCGERFDSRSNLRQHLHTHVSGSLPFGVPASILESNDLGEVHPLNENSEALECRRLSSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 HYCGERFDSRSNLRQHLHTHVSGSLPFGVPASILESNDLGEVHPLNENSEALECRRLSSF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 IVKENEQQPDHTNRGTTEPLQISQVSLISKDTEPVELNCNFSFSRKRKMSCTICGHKFPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IVKENEQQPDHTNRGTTEPLQISQVSLISKDTEPVELNCNFSFSRKRKMSCTICGHKFPR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 KSQLLEHMYTHKGKSYRYNRCQRFGNALAQRFQPYCDSWSDVSLKSSRLSQEHLDLPCAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 KSQLLEHMYTHKGKSYRYNRCQRFGNALAQRFQPYCDSWSDVSLKSSRLSQEHLDLPCAL
              370       380       390       400       410       420

              430     
pF1KB8 ESELTQENVDTILVE
       :::::::::::::::
CCDS97 ESELTQENVDTILVE
              430     

>>CCDS5231.1 ZBTB2 gene_id:57621|Hs108|chr6               (514 aa)
 initn: 907 init1: 590 opt: 652  Z-score: 342.6  bits: 72.7 E(32554): 9.2e-13
Smith-Waterman score: 860; 37.9% identity (61.0% similar) in 472 aa overlap (1-435:1-443)

               10        20        30        40        50        60
pF1KB8 MDTASHSLVLLQQLNMQREFGFLCDCTVAIGDVYFKAHRAVLAAFSNYFKMIFIHQTSEC
       :: :.:.:.:::::: ::::::::::::::::::::::..:::.:::::::.:.::::::
CCDS52 MDLANHGLILLQQLNAQREFGFLCDCTVAIGDVYFKAHKSVLASFSNYFKMLFVHQTSEC
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB8 IKIQPTDIQPDIFSYLLHIMYTGKGPKQIVDHSRLEEGIRFLHADYLSHIATEMNQ-VFS
       ....::::::::::::::.:::::   :..:  :::.::.::::  : . :.  .: .::
CCDS52 VRLKPTDIQPDIFSYLLHLMYTGKMAPQLIDPVRLEQGIKFLHAYPLIQEASLASQGAFS
               70        80        90       100       110       120

      120         130       140       150                  160     
pF1KB8 -PETV--QSSNLYGIQISTTQKTVVKQGLEVKEAP-----------SSNSGNRAAVQGDH
        :. :   .:.::::::.  :   ..:. ..  ::           :  : ...   .. 
CCDS52 HPDQVFPLASSLYGIQIADHQ---LRQATKIASAPEKLGRDPRPQTSRISQEQVPEASQL
              130       140          150       160       170       

         170           180       190       200          210        
pF1KB8 PQLQLSLA----IGLDDGTADQQRACPATQALEEHQKPP---VSIKQERCDPESV-ISQS
        ::  .::     ..  .   :    :   .      ::   ....    : . . .. .
CCDS52 SQLTSNLAQVNRTNMTPSDPLQTSLSPELVSTPVPPPPPGEETNLEASSSDEQPASLTIA
       180       190       200       210       220       230       

       220       230       240       250       260                 
pF1KB8 HPSPSSEVTGPTFTENSVKIHLCHYCGERFDSRSNLRQHLHTHVSGSLPFG--------V
       : .::    . .:     : . :: ::.::  ::.::.::. :..  .::         :
CCDS52 HVKPSIMKRNGSFP----KYYACHLCGRRFTLRSSLREHLQIHTG--VPFTSSQQGESRV
       240       250           260       270         280       290 

     270         280           290       300       310       320   
pF1KB8 PASILESN--DLG----EVHPLNENSEALECRRLSSFIVKENEQQPDHTNRGTTEPLQIS
       : . : ::  :::    ::   .  :.. : ...:.  . ...:: .     :  : .:.
CCDS52 PLT-LCSNAADLGKDAMEVPEAGMISDS-ELQHISDSPIIDGQQQSE-----TPPPSDIA
              300       310        320       330            340    

           330       340       350       360       370       380   
pF1KB8 QVSLISKDTEPVELNCNFSFSRKRKMSCTICGHKFPRKSQLLEHMYTHKGKSYRYNRCQR
       ... . .  .  :.       ..::. :::::.:: .::.  :::: : :: .. . :..
CCDS52 DIDNLEQADQEREV-------KRRKYECTICGRKFIQKSHWREHMYIHTGKPFKCSTCDK
          350              360       370       380       390       

           390       400       410       420       430             
pF1KB8 FGNALAQRFQPYCDSWSDVSLKSSRLSQEHLDLPCALESELTQENVDTILVE        
             :  .  : . :  .   . .... :.: :..: : .:  .:..::.        
CCDS52 SFCRANQAARHVCLNQSIDTY--TMVDKQTLEL-CTFE-EGSQ--MDNMLVQTNKPYKCN
       400       410         420        430          440       450 

CCDS52 LCDKTFSTPNEVVKHSCQNQNSDVFALDEGRSILLGSGDSEVTEPDHPVLASIKKEQETV
             460       470       480       490       500       510 




435 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:24:53 2016 done: Sat Nov  5 21:24:54 2016
 Total Scan time:  2.700 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]