Result of FASTA (omim) for
pF1KB8198
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8198, 201 aa
1>>>pF1KB8198 201 - 201 aa - 201 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6176+/-0.000411; mu= 18.1718+/- 0.026
mean_var=90.7444+/-18.408, 0's: 0 Z-trim(113.4): 479 B-trim: 147 in 1/54
Lambda= 0.134637
statistics sampled from 22104 (22679) to 22104 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.266), width: 16
Scan time: 4.400
The best scores are: opt bits E(85289)
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 1307 263.6 1.5e-70
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 1215 245.8 3.6e-65
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 879 180.6 1.8e-45
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 722 150.0 2.5e-36
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 720 149.6 3.2e-36
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 715 148.7 6.5e-36
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 704 146.5 2.7e-35
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 699 145.5 5.3e-35
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 694 144.6 1e-34
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 630 132.2 6.1e-31
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 619 130.1 2.7e-30
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 616 129.5 4.4e-30
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 613 128.9 6e-30
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 613 128.9 6e-30
XP_005264525 (OMIM: 179508) PREDICTED: ras-related ( 173) 609 128.0 8.9e-30
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 609 128.1 1e-29
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 609 128.1 1.1e-29
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 605 127.3 1.8e-29
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 601 126.5 3e-29
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 599 126.1 3.7e-29
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 599 126.2 4.1e-29
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 598 126.0 4.5e-29
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 598 126.0 4.5e-29
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 591 124.6 1.2e-28
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 588 123.9 1.6e-28
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 585 123.4 2.6e-28
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 580 122.4 4.9e-28
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 580 122.4 4.9e-28
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 580 122.4 4.9e-28
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 580 122.4 4.9e-28
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 577 121.9 8.2e-28
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 568 120.1 2.6e-27
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 560 118.6 7.5e-27
NP_001161078 (OMIM: 604199) ras-related protein Ra ( 152) 558 118.0 7.9e-27
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 553 117.2 1.9e-26
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 546 115.9 4.9e-26
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 546 115.9 4.9e-26
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 546 115.9 4.9e-26
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 546 115.9 4.9e-26
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 546 115.9 5.4e-26
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 542 115.1 8.2e-26
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 541 114.9 9.6e-26
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 531 112.9 3.7e-25
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 529 112.6 4.9e-25
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 518 110.4 2.1e-24
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 518 110.4 2.1e-24
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 518 110.4 2.1e-24
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 518 110.4 2.1e-24
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155) 515 109.7 2.6e-24
NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 506 108.1 1.1e-23
>>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H (201 aa)
initn: 1307 init1: 1307 opt: 1307 Z-score: 1387.6 bits: 263.6 E(85289): 1.5e-70
Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG
130 140 150 160 170 180
190 200
pF1KB8 GERPNLKIDSTPVKPAGGGCC
:::::::::::::::::::::
NP_112 GERPNLKIDSTPVKPAGGGCC
190 200
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 1119 init1: 1119 opt: 1215 Z-score: 1290.9 bits: 245.8 E(85289): 3.6e-65
Smith-Waterman score: 1215; 93.1% identity (97.0% similar) in 202 aa overlap (1-201:4-205)
10 20 30 40 50
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
::::::::::::::::::::::::::::::::::::::. ::::::::::::::::::::
NP_004 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
::::: ::::::::: :::::::::::::::::::::::::::.::::::::::::::::
NP_004 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
130 140 150 160 170 180
180 190 200
pF1KB8 ASGG-ERPNLKIDSTPVKPAGGGCC
..:: :. :.::.::::: .:::::
NP_004 TAGGAEKSNVKIQSTPVKQSGGGCC
190 200
>>XP_016873867 (OMIM: 612565) PREDICTED: ras-related pro (237 aa)
initn: 879 init1: 879 opt: 879 Z-score: 937.5 bits: 180.6 E(85289): 1.8e-45
Smith-Waterman score: 1183; 84.5% identity (84.5% similar) in 233 aa overlap (1-197:1-233)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
70 80 90 100 110 120
130 140
pF1KB8 NKSDLTTKKVVDNTTAK------------------------------------EFADSLG
::::::::::::::::: :::::::
XP_016 NKSDLTTKKVVDNTTAKVADGPVCPGSGRWGLLPLTCSPLLFSPLLFSPLPCQEFADSLG
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 IPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC
190 200 210 220 230
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 714 init1: 714 opt: 722 Z-score: 773.3 bits: 150.0 E(85289): 2.5e-36
Smith-Waterman score: 722; 55.9% identity (86.7% similar) in 188 aa overlap (1-184:1-188)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
: :::::::::::::::::.:::.::..:... ..:::::.:::::::::::: ::::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
::::::::::::::..::::: ::..:::.:...:. :.:.:...:...:: .:.....:
NP_057 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI----KKRMGPG
:: :.. :. :.. ....: . :: :::::::...:::.::.:.: .: ...:. .
NP_057 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS
130 140 150 160 170 180
180 190 200
pF1KB8 AASGGERPNLKIDSTPVKPAGGGCC
..:. :
NP_057 NSAGAGGPVKITENRSKKTSFFRCSLL
190 200
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 711 init1: 711 opt: 720 Z-score: 771.2 bits: 149.6 E(85289): 3.2e-36
Smith-Waterman score: 720; 55.4% identity (82.6% similar) in 195 aa overlap (1-192:1-193)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
: :::::::::::::::::.:.:.::..:... ..:::::.:::::::::::: ::::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
::::::::::::::..::::: ::..:::.:...:. :...:...:...:: .:.:...:
NP_005 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGP---GA
:: :.. :. :.. ....: . :: :.::::: :::.::.:.: .:: .: :
NP_005 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN
130 140 150 160 170 180
180 190 200
pF1KB8 ASGGERPNLKIDSTPVKPAGGGCC
. : ..:: ::
NP_005 SPQGSNQGVKI--TPDQQKRSSFFRCVLL
190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 711 init1: 711 opt: 715 Z-score: 765.8 bits: 148.7 E(85289): 6.5e-36
Smith-Waterman score: 715; 59.0% identity (87.9% similar) in 173 aa overlap (1-173:1-173)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
: :::::::::::::::::.:.:.::..:... ..:::::.:::::::::::: ::::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
::::::::::::::..::::: ::..:::.:...:. :...:...:...:: .:.:...:
XP_011 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG
:: :.. :. :.. ....: . :: :.::::: :::.::.:.: .:: .:
XP_011 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLGQK
130 140 150 160 170 180
190 200
pF1KB8 GERPNLKIDSTPVKPAGGGCC
XP_011 DNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
190 200 210
>>NP_002861 (OMIM: 602672) ras-related protein Rab-13 is (203 aa)
initn: 682 init1: 682 opt: 704 Z-score: 754.5 bits: 146.5 E(85289): 2.7e-35
Smith-Waterman score: 704; 54.3% identity (84.2% similar) in 184 aa overlap (1-184:1-184)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
: ::.::::::::::::::.::..:::.:.....::::::.::::::....:: ::::
NP_002 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
.:::::::::.:::..::::: :::.:::.::..:. :...:.. : . :: .:..::.:
NP_002 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG
:: :. .:. :.. : ..: :: :.:::::.. ::..:: ..: .: . : ...
NP_002 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
130 140 150 160 170 180
190 200
pF1KB8 GERPNLKIDSTPVKPAGGGCC
:..:
NP_002 GNKPPSTDLKTCDKKNTNKCSLG
190 200
>>NP_057215 (OMIM: 612672) ras-related protein Rab-10 [H (200 aa)
initn: 695 init1: 695 opt: 699 Z-score: 749.4 bits: 145.5 E(85289): 5.3e-35
Smith-Waterman score: 699; 53.5% identity (80.8% similar) in 198 aa overlap (5-201:6-200)
10 20 30 40 50
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL
:: ::::::::::::::.:.:.::.::... ..:::::.::::.:.::.:: :::
NP_057 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLV
:::::::::::.:::.:::::: ::..:::.:. .:. :...::..::..:.:.:...:.
NP_057 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAAS
::: :. :.:: . ....: :: :.::::: :.:.::.:.: .: .. :
NP_057 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT-PVKEP
130 140 150 160 170
180 190 200
pF1KB8 GGERPNLKIDSTP-VKPAGGGCC
..: :. :.: : . ::
NP_057 NSE--NVDISSGGGVTGWKSKCC
180 190 200
>>NP_006852 (OMIM: 604199) ras-related protein Rab-35 is (201 aa)
initn: 683 init1: 558 opt: 694 Z-score: 744.1 bits: 144.6 E(85289): 1e-34
Smith-Waterman score: 694; 54.0% identity (77.7% similar) in 202 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
: .::.:::::.::::::::: :::::::.:.. :::.::::::::::.:..:. .:::
NP_006 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
:::::::::::::::.::::.::.:::::::. ::..:::.::.::.. ..: ..:::
NP_006 IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVG
70 80 90 100 110
130 140 150 160 170
pF1KB8 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAAS
::.: .:::.. : .:: ..:: ..:::::. .:::. : .. . . . : .
NP_006 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ
120 130 140 150 160 170
180 190 200
pF1KB8 GGERPNLKIDSTPVKPAGGGCC
.. : . : . ::
NP_006 QQQQQNDVVKLTKNSKRKKRCC
180 190 200
>>NP_004274 (OMIM: 604350) ras-related protein Rab-3D [H (219 aa)
initn: 615 init1: 595 opt: 630 Z-score: 676.5 bits: 132.2 E(85289): 6.1e-31
Smith-Waterman score: 630; 45.4% identity (78.0% similar) in 205 aa overlap (2-200:16-219)
10 20 30 40
pF1KB8 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFK
. ..::.:::::::.:.:::. .:.:.:::..: ...::.:.:::
NP_004 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEI
..:. : :::::::::::::.::::..::::: :....::...:::.: :..: .:
NP_004 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 DRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA
:. .:.. .::::: :: ..:: ....::.::. :.:.:::. ::.:.: ..
NP_004 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
130 140 150 160 170 180
170 180 190 200
pF1KB8 AEIKKRMG----PGAASG--GERPNLKIDSTPVKPAGGGCC
: ..:. :...:: :. : . :. .:.. .:
NP_004 DVICEKMNESLEPSSSSGSNGKGPAVG-DAPAPQPSSCSC
190 200 210
201 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:28:34 2016 done: Fri Nov 4 10:28:35 2016
Total Scan time: 4.400 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]