Result of FASTA (ccds) for pF1KB8254
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8254, 192 aa
  1>>>pF1KB8254 192 - 192 aa - 192 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6840+/-0.000743; mu= 16.4299+/- 0.045
 mean_var=69.6616+/-13.929, 0's: 0 Z-trim(110.2): 181  B-trim: 373 in 1/49
 Lambda= 0.153666
 statistics sampled from 11252 (11459) to 11252 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.352), width:  16
 Scan time:  1.800

The best scores are:                                      opt bits E(32554)
CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7            ( 192) 1299 296.4 7.2e-81
CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17          ( 192) 1232 281.5 2.1e-76
CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22          ( 192) 1211 276.9 5.4e-75
CCDS221.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  945 217.9   3e-57
CCDS222.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  941 217.0 5.6e-57
CCDS7748.1 RHOG gene_id:391|Hs108|chr11            ( 191)  936 215.9 1.2e-56
CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2          ( 205)  831 192.7 1.3e-49
CCDS5349.1 RAC1 gene_id:5879|Hs108|chr7            ( 211)  796 184.9 2.9e-47
CCDS9757.1 RHOJ gene_id:57381|Hs108|chr14          ( 214)  791 183.8 6.2e-47
CCDS2795.1 RHOA gene_id:387|Hs108|chr3             ( 193)  735 171.4 3.2e-43
CCDS854.1 RHOC gene_id:389|Hs108|chr1              ( 193)  726 169.4 1.3e-42
CCDS1575.1 RHOU gene_id:58480|Hs108|chr1           ( 258)  715 167.0 8.4e-42
CCDS1699.1 RHOB gene_id:388|Hs108|chr2             ( 196)  704 164.5 3.7e-41
CCDS10068.1 RHOV gene_id:171177|Hs108|chr15        ( 236)  696 162.8 1.5e-40
CCDS8155.1 RHOD gene_id:29984|Hs108|chr11          ( 210)  668 156.5 9.9e-39
CCDS9222.1 RHOF gene_id:54509|Hs108|chr12          ( 211)  645 151.4 3.4e-37
CCDS82775.1 RHOA gene_id:387|Hs108|chr3            ( 187)  603 142.1   2e-34
CCDS11452.1 RND2 gene_id:8153|Hs108|chr17          ( 227)  573 135.5 2.3e-32
CCDS2190.1 RND3 gene_id:390|Hs108|chr2             ( 244)  569 134.6 4.5e-32
CCDS3458.1 RHOH gene_id:399|Hs108|chr4             ( 191)  532 126.3 1.1e-29
CCDS8771.1 RND1 gene_id:27289|Hs108|chr12          ( 232)  495 118.2 3.7e-27
CCDS7261.1 RHOBTB1 gene_id:9886|Hs108|chr10        ( 696)  365 89.8 3.9e-18
CCDS6034.1 RHOBTB2 gene_id:23221|Hs108|chr8        ( 727)  365 89.9   4e-18
CCDS55211.1 RHOBTB2 gene_id:23221|Hs108|chr8       ( 734)  365 89.9 4.1e-18
CCDS55210.1 RHOBTB2 gene_id:23221|Hs108|chr8       ( 749)  365 89.9 4.1e-18
CCDS73330.1 RHOD gene_id:29984|Hs108|chr11         ( 144)  287 71.9   2e-13
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12        ( 201)  265 67.2 7.5e-12
CCDS9485.1 RAP2A gene_id:5911|Hs108|chr13          ( 183)  264 66.9 8.2e-12
CCDS14632.1 RAP2C gene_id:57826|Hs108|chrX         ( 183)  264 66.9 8.2e-12
CCDS1123.1 RIT1 gene_id:6016|Hs108|chr1            ( 219)  264 67.0 9.4e-12
CCDS58037.1 RIT1 gene_id:6016|Hs108|chr1           ( 236)  264 67.0 9.9e-12
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16        ( 256)  264 67.1   1e-11
CCDS3170.1 RAP2B gene_id:5912|Hs108|chr3           ( 183)  261 66.2 1.3e-11
CCDS7699.1 HRAS gene_id:3265|Hs108|chr11           ( 170)  259 65.8 1.7e-11
CCDS7698.1 HRAS gene_id:3265|Hs108|chr11           ( 189)  259 65.8 1.8e-11
CCDS8702.1 KRAS gene_id:3845|Hs108|chr12           ( 188)  257 65.4 2.5e-11
CCDS8703.1 KRAS gene_id:3845|Hs108|chr12           ( 189)  257 65.4 2.5e-11
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6          ( 237)  258 65.7 2.5e-11
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX         ( 201)  257 65.4 2.6e-11
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17       ( 196)  255 64.9 3.4e-11
CCDS9271.1 RAN gene_id:5901|Hs108|chr12            ( 216)  255 65.0 3.7e-11
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17       ( 223)  255 65.0 3.8e-11
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17       ( 228)  255 65.0 3.8e-11
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16        ( 190)  254 64.7 3.9e-11
CCDS62431.1 RIT2 gene_id:6014|Hs108|chr18          ( 153)  250 63.7 6.2e-11
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12         ( 225)  251 64.1   7e-11
CCDS11921.1 RIT2 gene_id:6014|Hs108|chr18          ( 217)  250 63.9   8e-11
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17       ( 216)  249 63.7 9.3e-11


>>CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7                 (192 aa)
 initn: 1299 init1: 1299 opt: 1299  Z-score: 1565.3  bits: 296.4 E(32554): 7.2e-81
Smith-Waterman score: 1299; 100.0% identity (100.0% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
       ::::::::::::
CCDS53 PVKKRKRKCLLL
              190  

>>CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17               (192 aa)
 initn: 1268 init1: 1232 opt: 1232  Z-score: 1485.0  bits: 281.5 E(32554): 2.1e-76
Smith-Waterman score: 1232; 92.7% identity (98.4% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       ::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::
CCDS11 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :::::::.:..:::.:::::::::::.:::.:::::::::::::::::::::::::::::
CCDS11 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
       ::::  .:: ..
CCDS11 PVKKPGKKCTVF
              190  

>>CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22               (192 aa)
 initn: 1211 init1: 1211 opt: 1211  Z-score: 1459.9  bits: 276.9 E(32554): 5.4e-75
Smith-Waterman score: 1211; 92.2% identity (97.9% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS13 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       :::::::::::::::::::::::::::::.:::::::.::::::::.:::::::::::::
CCDS13 QEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
       ::::::::::::::.:::::::::.:::: .:::::::::::::::::::::::::::: 
CCDS13 DDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQ
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
       :....:: : ::
CCDS13 PTRQQKRACSLL
              190  

>>CCDS221.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 938 init1: 938 opt: 945  Z-score: 1141.2  bits: 217.9 E(32554): 3e-57
Smith-Waterman score: 945; 70.8% identity (89.1% similar) in 192 aa overlap (1-192:1-191)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.::::::::::::::::::::::: ::.::.:::::::...::. :.: .:::.::::
CCDS22 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       :::::::::::::::::::.:::.:::.:::::. :: ::. ::::.::..::::..:::
CCDS22 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :: .::::: ..:  :::   .  .:... ::::.:::::::.:::.:::::: :.: ::
CCDS22 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
         :: .:.:.::
CCDS22 EPKK-SRRCVLL
               190 

>>CCDS222.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 1011 init1: 941 opt: 941  Z-score: 1136.4  bits: 217.0 E(32554): 5.6e-57
Smith-Waterman score: 941; 69.1% identity (89.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.::::::::::::::::::::::: ::.::.:::::::...::. :.: .:::.::::
CCDS22 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       :::::::::::::::::::.:::.:::.:::::. :: ::. ::::.::..::::..:::
CCDS22 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :: .::::: ..:  :::   .  .:... ::::.:::::::::::.:::::: :.: ::
CCDS22 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPP
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
        .. ... :.. 
CCDS22 ETQPKRKCCIF 
              190  

>>CCDS7748.1 RHOG gene_id:391|Hs108|chr11                 (191 aa)
 initn: 918 init1: 918 opt: 936  Z-score: 1130.4  bits: 215.9 E(32554): 1.2e-56
Smith-Waterman score: 936; 71.9% identity (86.5% similar) in 192 aa overlap (1-192:1-191)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.:::::::::::::::::: ::::::: ::::::::::::.  :::. :::.::::::
CCDS77 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
       ::.::::: ::::::.::.::::..:: :.:::: ::.::: ::::..::.::::: :::
CCDS77 QEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
        . ::...:::.  .:::  :: :.::.: ::.::::::: : :.: :: ::.:::: : 
CCDS77 AQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAEAVRAVLNPT
              130       140       150       160       170       180

              190  
pF1KB8 PVKKRKRKCLLL
       :.: : :.:.::
CCDS77 PIK-RGRSCILL
               190 

>>CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2               (205 aa)
 initn: 826 init1: 826 opt: 831  Z-score: 1004.2  bits: 192.7 E(32554): 1.3e-49
Smith-Waterman score: 831; 64.2% identity (83.7% similar) in 190 aa overlap (4-190:10-199)

                     10        20        30        40        50    
pF1KB8       MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLG
                .::::::::::::::::.::...::: ::.:::::.:...: : ::   ::
CCDS33 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB8 LWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVG
       :.:::::::::::::::::.:::::::::.:.::::.::. .: ::.... ::.:..:.:
CCDS33 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KB8 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR
       :..:::::  :. .:.. :  ::   ::  .::::::  :.:::::::.:::::::::: 
CCDS33 TQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII
              130       140       150       160       170       180

          180          190      
pF1KB8 AVLCPPP--VKKR-KRKCLLL    
       :.: :    ::::   .:.      
CCDS33 AILTPKKHTVKKRIGSRCINCCLIT
              190       200     

>>CCDS5349.1 RAC1 gene_id:5879|Hs108|chr7                 (211 aa)
 initn: 793 init1: 793 opt: 796  Z-score: 962.1  bits: 184.9 E(32554): 2.9e-47
Smith-Waterman score: 1251; 91.0% identity (91.0% similar) in 211 aa overlap (1-192:1-211)

               10        20        30        40        50        60
pF1KB8 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70                           80        90       100 
pF1KB8 QEDYDRLRPLSYPQT-------------------DVFLICFSLVSPASFENVRAKWYPEV
       :::::::::::::::                   ::::::::::::::::::::::::::
CCDS53 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV
               70        80        90       100       110       120

             110       120       130       140       150       160 
pF1KB8 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT
              130       140       150       160       170       180

             170       180       190  
pF1KB8 QRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL
       :::::::::::::::::::::::::::::::
CCDS53 QRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL
              190       200       210 

>>CCDS9757.1 RHOJ gene_id:57381|Hs108|chr14               (214 aa)
 initn: 781 init1: 781 opt: 791  Z-score: 956.1  bits: 183.8 E(32554): 6.2e-47
Smith-Waterman score: 791; 60.6% identity (83.5% similar) in 188 aa overlap (2-189:20-204)

                                 10        20        30        40  
pF1KB8                   MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA
                          . .::::::::::::::::.::...::: ::.:::::.:..
CCDS97 MNCKEGTDSSCGCRGNDEKKMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV
               10        20        30        40        50        60

             50        60        70        80        90       100  
pF1KB8 NVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR
       .: : ::   :::.::::::::..:::::::.:::::::::.:.:::..::. .: ::..
CCDS97 TVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELK
               70        80        90       100       110       120

            110       120       130       140       150       160  
pF1KB8 HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ
          :..: .:.::..:::::  :. .:   :  :.:: .:. .:: :::  :::::::::
CCDS97 DCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQ
              130       140       150       160       170       180

            170       180       190         
pF1KB8 RGLKTVFDEAIRAVLCPPPVKKRKRKCLLL       
       .:::.:::::: ... :   ::.:..:          
CCDS97 KGLKAVFDEAILTIFHP---KKKKKRCSEGHSCCSII
              190          200       210    

>>CCDS2795.1 RHOA gene_id:387|Hs108|chr3                  (193 aa)
 initn: 719 init1: 719 opt: 735  Z-score: 889.5  bits: 171.4 E(32554): 3.2e-43
Smith-Waterman score: 735; 57.7% identity (76.3% similar) in 194 aa overlap (1-192:1-193)

                 10        20        30        40        50        
pF1KB8 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT
       : ::  : :.::::: ::::::: .. . ::  :.::::.:: :.. :::: :.:.::::
CCDS27 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB8 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD
       :::::::::::::::.:::.:.:::. :: :.::.  :: :::.: :::.::::::.: :
CCDS27 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB8 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC
       ::.:. : ..: . :  :.   .:  ::..:::  :.:::: :. :.. ::. : ::.: 
CCDS27 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL-
              130       140       150       160       170          

      180       190  
pF1KB8 PPPVKKRKRKCLLL
            :.:  ::.:
CCDS27 QARRGKKKSGCLVL
     180       190   




192 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:03:37 2016 done: Fri Nov  4 11:03:38 2016
 Total Scan time:  1.800 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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