FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8263, 321 aa
  1>>>pF1KB8263 321 - 321 aa - 321 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.3301+/-0.00144; mu= 3.5437+/- 0.087
 mean_var=327.6440+/-65.611, 0's: 0 Z-trim(110.0): 105  B-trim: 88 in 1/52
 Lambda= 0.070855
 statistics sampled from 11183 (11263) to 11183 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.346), width:  16
 Scan time:  2.300

The best scores are:                                      opt bits E(32554)
CCDS12545.1 FBL gene_id:2091|Hs108|chr19           ( 321) 2202 238.8 4.3e-63


>>CCDS12545.1 FBL gene_id:2091|Hs108|chr19                (321 aa)
 initn: 2202 init1: 2202 opt: 2202  Z-score: 1246.3  bits: 238.8 E(32554): 4.3e-63
Smith-Waterman score: 2202; 100.0% identity (100.0% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB8 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
              250       260       270       280       290       300

              310       320 
pF1KB8 PYERDHAVVVGVYRPPPKVKN
       :::::::::::::::::::::
CCDS12 PYERDHAVVVGVYRPPPKVKN
              310       320 




321 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:08:56 2016 done: Fri Nov  4 11:08:56 2016
 Total Scan time:  2.300 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]