FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8300, 463 aa 1>>>pF1KB8300 463 - 463 aa - 463 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0770+/-0.00052; mu= 14.2330+/- 0.032 mean_var=84.7631+/-16.815, 0's: 0 Z-trim(108.5): 73 B-trim: 56 in 1/50 Lambda= 0.139306 statistics sampled from 16494 (16549) to 16494 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.54), E-opt: 0.2 (0.194), width: 16 Scan time: 7.390 The best scores are: opt bits E(85289) NP_006657 (OMIM: 604788) ruvB-like 2 isoform 1 [Ho ( 463) 2907 594.8 1.6e-169 NP_001308119 (OMIM: 604788) ruvB-like 2 isoform 2 ( 429) 2653 543.7 3.6e-154 XP_011524632 (OMIM: 604788) PREDICTED: ruvB-like 2 ( 418) 2621 537.3 3e-152 NP_001308120 (OMIM: 604788) ruvB-like 2 isoform 3 ( 418) 2621 537.3 3e-152 XP_011511551 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 375) 747 160.6 6.5e-39 NP_001306013 (OMIM: 603449) ruvB-like 1 isoform 2 ( 386) 747 160.6 6.7e-39 XP_011511550 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 393) 747 160.6 6.8e-39 NP_003698 (OMIM: 603449) ruvB-like 1 isoform 1 [Ho ( 456) 747 160.7 7.7e-39 XP_016862845 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 467) 747 160.7 7.9e-39 NP_001306015 (OMIM: 603449) ruvB-like 1 isoform 3 ( 315) 545 120.0 9.4e-27 XP_005247898 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 396) 545 120.0 1.1e-26 XP_016862846 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 407) 545 120.1 1.2e-26 >>NP_006657 (OMIM: 604788) ruvB-like 2 isoform 1 [Homo s (463 aa) initn: 2907 init1: 2907 opt: 2907 Z-score: 3164.3 bits: 594.8 E(85289): 1.6e-169 Smith-Waterman score: 2907; 100.0% identity (100.0% similar) in 463 aa overlap (1-463:1-463) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 SLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 TVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 VHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 PYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTE 370 380 390 400 410 420 430 440 450 460 pF1KB8 VQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS ::::::::::::::::::::::::::::::::::::::::::: NP_006 VQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS 430 440 450 460 >>NP_001308119 (OMIM: 604788) ruvB-like 2 isoform 2 [Hom (429 aa) initn: 2653 init1: 2653 opt: 2653 Z-score: 2888.9 bits: 543.7 E(85289): 3.6e-154 Smith-Waterman score: 2653; 100.0% identity (100.0% similar) in 423 aa overlap (41-463:7-429) 20 30 40 50 60 70 pF1KB8 PEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAG :::::::::::::::::::::::::::::: NP_001 MCASHPQASQGMVGQLAARRAAGVVLEMIREGKIAG 10 20 30 80 90 100 110 120 130 pF1KB8 RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVR 40 50 60 70 80 90 140 150 160 170 180 190 pF1KB8 IKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAG 100 110 120 130 140 150 200 210 220 230 240 250 pF1KB8 DVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVI 160 170 180 190 200 210 260 270 280 290 300 310 pF1KB8 NSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFS 220 230 240 250 260 270 320 330 340 350 360 370 pF1KB8 FLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQI 280 290 300 310 320 330 380 390 400 410 420 430 pF1KB8 LRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVY 340 350 360 370 380 390 440 450 460 pF1KB8 SLFLDESRSTQYMKEYQDAFLFNELKGETMDTS ::::::::::::::::::::::::::::::::: NP_001 SLFLDESRSTQYMKEYQDAFLFNELKGETMDTS 400 410 420 >>XP_011524632 (OMIM: 604788) PREDICTED: ruvB-like 2 iso (418 aa) initn: 2621 init1: 2621 opt: 2621 Z-score: 2854.3 bits: 537.3 E(85289): 3e-152 Smith-Waterman score: 2621; 100.0% identity (100.0% similar) in 418 aa overlap (46-463:1-418) 20 30 40 50 60 70 pF1KB8 VTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLI :::::::::::::::::::::::::::::: XP_011 MVGQLAARRAAGVVLEMIREGKIAGRAVLI 10 20 30 80 90 100 110 120 130 pF1KB8 AGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEET 40 50 60 70 80 90 140 150 160 170 180 190 pF1KB8 EIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITI 100 110 120 130 140 150 200 210 220 230 240 250 pF1KB8 DKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQ 160 170 180 190 200 210 260 270 280 290 300 310 pF1KB8 GFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRA 220 230 240 250 260 270 320 330 340 350 360 370 pF1KB8 LESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRC 280 290 300 310 320 330 380 390 400 410 420 430 pF1KB8 EEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 340 350 360 370 380 390 440 450 460 pF1KB8 ESRSTQYMKEYQDAFLFNELKGETMDTS :::::::::::::::::::::::::::: XP_011 ESRSTQYMKEYQDAFLFNELKGETMDTS 400 410 >>NP_001308120 (OMIM: 604788) ruvB-like 2 isoform 3 [Hom (418 aa) initn: 2621 init1: 2621 opt: 2621 Z-score: 2854.3 bits: 537.3 E(85289): 3e-152 Smith-Waterman score: 2621; 100.0% identity (100.0% similar) in 418 aa overlap (46-463:1-418) 20 30 40 50 60 70 pF1KB8 VTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLI :::::::::::::::::::::::::::::: NP_001 MVGQLAARRAAGVVLEMIREGKIAGRAVLI 10 20 30 80 90 100 110 120 130 pF1KB8 AGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEET 40 50 60 70 80 90 140 150 160 170 180 190 pF1KB8 EIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITI 100 110 120 130 140 150 200 210 220 230 240 250 pF1KB8 DKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQ 160 170 180 190 200 210 260 270 280 290 300 310 pF1KB8 GFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRA 220 230 240 250 260 270 320 330 340 350 360 370 pF1KB8 LESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRC 280 290 300 310 320 330 380 390 400 410 420 430 pF1KB8 EEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 340 350 360 370 380 390 440 450 460 pF1KB8 ESRSTQYMKEYQDAFLFNELKGETMDTS :::::::::::::::::::::::::::: NP_001 ESRSTQYMKEYQDAFLFNELKGETMDTS 400 410 >>XP_011511551 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (375 aa) initn: 1059 init1: 483 opt: 747 Z-score: 819.6 bits: 160.6 E(85289): 6.5e-39 Smith-Waterman score: 1097; 45.6% identity (74.9% similar) in 375 aa overlap (9-370:2-374) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. XP_011 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: XP_011 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 60 70 80 90 100 110 130 140 150 160 170 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLG . :::.::.:::: :. ::::.:. . . : : :. .... :::.. : XP_011 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. XP_011 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK 180 190 200 210 220 230 240 250 260 270 280 pF1KB8 KEVVHTVSLHEIDVINSRTQGFLALFS--GDT-----GEIKSEVREQINAKVAEWREEGK ::... :.::..:: :.: :: ..: :. :: ...: .:: : .. ..: XP_011 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIP ::..:::::.::::::::: :..:.:::::..::..:.:.::: :::: . :::::: XP_011 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP 300 310 320 330 340 350 350 360 370 380 390 400 pF1KB8 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT .:::::..:. : :. .. ::. XP_011 LDLLDRVMIIRTMLYTPQEMKQVP 360 370 >>NP_001306013 (OMIM: 603449) ruvB-like 1 isoform 2 [Hom (386 aa) initn: 1064 init1: 483 opt: 747 Z-score: 819.4 bits: 160.6 E(85289): 6.7e-39 Smith-Waterman score: 1102; 45.7% identity (75.0% similar) in 376 aa overlap (9-371:2-375) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. NP_001 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: NP_001 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 60 70 80 90 100 110 130 140 150 160 170 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLG . :::.::.:::: :. ::::.:. . . : : :. .... :::.. : NP_001 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. NP_001 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK 180 190 200 210 220 230 240 250 260 270 280 pF1KB8 KEVVHTVSLHEIDVINSRTQGFLALFS--GDT-----GEIKSEVREQINAKVAEWREEGK ::... :.::..:: :.: :: ..: :. :: ...: .:: : .. ..: NP_001 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIP ::..:::::.::::::::: :..:.:::::..::..:.:.::: :::: . :::::: NP_001 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP 300 310 320 330 340 350 350 360 370 380 390 400 pF1KB8 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT .:::::..:. : :. .. ::.: NP_001 LDLLDRVMIIRTMLYTPQEMKQVLSAAADPGQLAC 360 370 380 >>XP_011511550 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (393 aa) initn: 967 init1: 514 opt: 747 Z-score: 819.3 bits: 160.6 E(85289): 6.8e-39 Smith-Waterman score: 974; 45.0% identity (74.7% similar) in 340 aa overlap (9-336:2-339) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. XP_011 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: XP_011 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 60 70 80 90 100 110 130 140 150 160 170 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLG . :::.::.:::: :. ::::.:. . . : : :. .... :::.. : XP_011 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. XP_011 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK 180 190 200 210 220 230 240 250 260 270 280 pF1KB8 KEVVHTVSLHEIDVINSRTQGFLALFS--GDT-----GEIKSEVREQINAKVAEWREEGK ::... :.::..:: :.: :: ..: :. :: ...: .:: : .. ..: XP_011 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPI ::..:::::.::::::::: :..:.:::::..::..:.:.::: :: XP_011 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRYAVLDSKEIWVC 300 310 320 330 340 350 350 360 370 380 390 400 pF1KB8 DLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITA XP_011 GFIAPNCLSGGSSLMAEFGQLLNEALRTSHPLTASLLTFWTE 360 370 380 390 >>NP_003698 (OMIM: 603449) ruvB-like 1 isoform 1 [Homo s (456 aa) initn: 1229 init1: 483 opt: 747 Z-score: 818.3 bits: 160.7 E(85289): 7.7e-39 Smith-Waterman score: 1267; 43.0% identity (73.7% similar) in 456 aa overlap (9-451:2-455) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. NP_003 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: NP_003 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 60 70 80 90 100 110 130 140 150 160 170 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLG . :::.::.:::: :. ::::.:. . . : : :. .... :::.. : NP_003 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. NP_003 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK 180 190 200 210 220 230 240 250 260 270 280 pF1KB8 KEVVHTVSLHEIDVINSRTQGFLALFS--GDT-----GEIKSEVREQINAKVAEWREEGK ::... :.::..:: :.: :: ..: :. :: ...: .:: : .. ..: NP_003 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIP ::..:::::.::::::::: :..:.:::::..::..:.:.::: :::: . :::::: NP_003 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP 300 310 320 330 340 350 350 360 370 380 390 400 pF1KB8 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT .:::::..:. : :. .. :::..:: . : ...::.: . : .:: .:.:::..::.: NP_003 LDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLT 360 370 380 390 400 410 410 420 430 440 450 460 pF1KB8 AASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS :.:. . .. . .... :: : . :.. . . :: .. NP_003 PANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 420 430 440 450 >>XP_016862845 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (467 aa) initn: 1167 init1: 514 opt: 747 Z-score: 818.1 bits: 160.7 E(85289): 7.9e-39 Smith-Waterman score: 1174; 45.4% identity (75.1% similar) in 405 aa overlap (9-400:2-404) 10 20 30 40 50 60 pF1KB8 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. XP_016 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: XP_016 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 60 70 80 90 100 110 130 140 150 160 170 pF1KB8 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLG . :::.::.:::: :. ::::.:. . . : : :. .... :::.. : XP_016 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. XP_016 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK 180 190 200 210 220 230 240 250 260 270 280 pF1KB8 KEVVHTVSLHEIDVINSRTQGFLALFS--GDT-----GEIKSEVREQINAKVAEWREEGK ::... :.::..:: :.: :: ..: :. :: ...: .:: : .. ..: XP_016 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIP ::..:::::.::::::::: :..:.:::::..::..:.:.::: :::: . :::::: XP_016 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP 300 310 320 330 340 350 350 360 370 380 390 400 pF1KB8 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT .:::::..:. : :. .. :::..:: . : ...::.: . : .:: .:.:: XP_016 LDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRSHDSMNM 360 370 380 390 400 410 410 420 430 440 450 460 pF1KB8 AASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS XP_016 LVQLIWKPAAFKYHLIVSTQYDDSAPHRVGDCTQGILKLKSRPWKLPGVGSGHTWK 420 430 440 450 460 >>NP_001306015 (OMIM: 603449) ruvB-like 1 isoform 3 [Hom (315 aa) initn: 886 init1: 310 opt: 545 Z-score: 601.3 bits: 120.0 E(85289): 9.4e-27 Smith-Waterman score: 895; 45.6% identity (73.4% similar) in 316 aa overlap (68-370:1-314) 40 50 60 70 80 90 pF1KB8 EPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPD .::::::.:: :::::::.:...:: :: NP_001 MAGRAVLLAGPPGTGKTALALAIAQELGSK 10 20 30 100 110 120 130 140 150 pF1KB8 TPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGT .:: ..:::..: :..:::.: . :::.::.:::: :. ::::.:. . . : : NP_001 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY 40 50 60 70 80 90 160 170 180 190 200 210 pF1KB8 GSKVGKLT--LKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRA :. .... :::.. : ...::: :..:.::::: :. .: ... :: : : NP_001 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA 100 110 120 130 140 150 220 230 240 250 260 pF1KB8 RDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS--GDT----- ..: . . .: : :...:.::... :.::..:: :.: :: ..: :. NP_001 TEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 160 170 180 190 200 270 280 290 300 310 320 pF1KB8 GEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLI :: ...: .:: : .. ..: ::..:::::.::::::::: :..:.:::::..::..: NP_001 TEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVI 210 220 230 240 250 260 330 340 350 360 370 380 pF1KB8 MATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSE .:.::: :::: . ::::::.:::::..:. : :. .. ::. NP_001 FASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQVP 270 280 290 300 310 390 400 410 420 430 440 pF1KB8 DAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 463 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 11:30:13 2016 done: Fri Nov 4 11:30:15 2016 Total Scan time: 7.390 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]