FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8319, 299 aa 1>>>pF1KB8319 299 - 299 aa - 299 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7445+/-0.00033; mu= 14.4711+/- 0.021 mean_var=90.5126+/-17.892, 0's: 0 Z-trim(117.0): 4 B-trim: 436 in 1/53 Lambda= 0.134809 statistics sampled from 28638 (28642) to 28638 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.336), width: 16 Scan time: 5.790 The best scores are: opt bits E(85289) NP_001295276 (OMIM: 608943) anamorsin isoform 2 [H ( 299) 1940 387.0 2.5e-107 NP_064709 (OMIM: 608943) anamorsin isoform 1 [Homo ( 312) 1606 322.0 9.1e-88 XP_005256120 (OMIM: 608943) PREDICTED: anamorsin i ( 253) 1248 252.3 7e-67 NP_001295287 (OMIM: 608943) anamorsin isoform 3 [H ( 266) 914 187.4 2.6e-47 >>NP_001295276 (OMIM: 608943) anamorsin isoform 2 [Homo (299 aa) initn: 1940 init1: 1940 opt: 1940 Z-score: 2048.0 bits: 387.0 E(85289): 2.5e-107 Smith-Waterman score: 1940; 99.0% identity (99.3% similar) in 299 aa overlap (1-299:1-299) 10 20 30 40 50 60 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 PLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 AAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGL 190 200 210 220 230 240 250 260 270 280 290 pF1KB8 AEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGEKVLLSDSNLNDA ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::.:: NP_001 AEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGEKVLLSDSNLHDA 250 260 270 280 290 >>NP_064709 (OMIM: 608943) anamorsin isoform 1 [Homo sap (312 aa) initn: 1603 init1: 1603 opt: 1606 Z-score: 1696.7 bits: 322.0 E(85289): 9.1e-88 Smith-Waterman score: 1890; 94.6% identity (94.9% similar) in 312 aa overlap (1-299:1-312) 10 20 30 40 50 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQC------- :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 10 20 30 40 50 60 60 70 80 90 100 pF1KB8 ------LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB8 LSGLVEVKELQREPLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: NP_064 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB8 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 190 200 210 220 230 240 230 240 250 260 270 280 pF1KB8 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGE :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: NP_064 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 250 260 270 280 290 300 290 pF1KB8 KVLLSDSNLNDA :::::::::.:: NP_064 KVLLSDSNLHDA 310 >>XP_005256120 (OMIM: 608943) PREDICTED: anamorsin isofo (253 aa) initn: 1248 init1: 1248 opt: 1248 Z-score: 1321.7 bits: 252.3 E(85289): 7e-67 Smith-Waterman score: 1248; 99.0% identity (99.0% similar) in 199 aa overlap (1-199:1-199) 10 20 30 40 50 60 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 PLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 AAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGL ::::::::::::::::: : XP_005 AAKLWTLSANDMEDDSMHLWPCRRTGKREVKGTDELPTQVSLWKLLPGRCLPLCQLPLPW 190 200 210 220 230 240 >>NP_001295287 (OMIM: 608943) anamorsin isoform 3 [Homo (266 aa) initn: 1221 init1: 907 opt: 914 Z-score: 970.3 bits: 187.4 E(85289): 2.6e-47 Smith-Waterman score: 1198; 92.5% identity (92.5% similar) in 212 aa overlap (1-199:1-212) 10 20 30 40 50 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQC------- :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 10 20 30 40 50 60 60 70 80 90 100 pF1KB8 ------LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB8 LSGLVEVKELQREPLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: NP_001 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB8 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG :::::::::::::::::::::::::::::: : NP_001 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMHLWPCRRTGKREVKGTDELPTQVSLWKLLP 190 200 210 220 230 240 230 240 250 260 270 280 pF1KB8 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGE NP_001 GRCLPLCQLPLPWDASLQTWGKGASE 250 260 299 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 11:42:50 2016 done: Fri Nov 4 11:42:50 2016 Total Scan time: 5.790 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]