Result of FASTA (omim) for
pF1KB8354
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8354, 457 aa
1>>>pF1KB8354 457 - 457 aa - 457 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7383+/-0.000433; mu= 15.5225+/- 0.027
mean_var=83.4637+/-16.296, 0's: 0 Z-trim(111.1): 118 B-trim: 0 in 0/52
Lambda= 0.140386
statistics sampled from 19466 (19588) to 19466 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.581), E-opt: 0.2 (0.23), width: 16
Scan time: 8.830
The best scores are: opt bits E(85289)
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 3026 623.2 4.3e-178
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 3026 623.2 4.3e-178
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 3026 623.2 4.3e-178
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 1730 360.8 4.5e-99
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 1616 337.6 3.7e-92
NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl ( 268) 1501 314.2 2.7e-85
NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans ( 108) 325 75.8 6.5e-14
NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 321 75.0 1.1e-13
NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 321 75.0 1.1e-13
XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-pr ( 142) 318 74.4 2.2e-13
NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 318 74.4 2.2e-13
NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-tr ( 142) 318 74.4 2.2e-13
NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 318 74.4 2.2e-13
NP_068758 (OMIM: 259450,607063,610968) peptidyl-pr ( 582) 297 70.6 1.3e-11
XP_011523401 (OMIM: 259450,607063,610968) PREDICTE ( 601) 297 70.6 1.3e-11
XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-pr ( 359) 290 69.0 2.3e-11
NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans ( 570) 290 69.2 3.4e-11
NP_001271270 (OMIM: 616257) peptidyl-prolyl cis-tr ( 623) 289 69.0 4.2e-11
NP_001309892 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 272 65.0 8.6e-11
XP_016859085 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 272 65.0 8.6e-11
XP_016859084 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 272 65.0 8.6e-11
XP_016859083 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 272 65.0 8.6e-11
XP_016859082 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 272 65.0 8.6e-11
NP_001309893 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 272 65.0 8.6e-11
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 280 67.0 8.8e-11
XP_016868231 (OMIM: 604839) PREDICTED: inactive pe ( 266) 274 65.7 1.7e-10
XP_006716216 (OMIM: 604839) PREDICTED: inactive pe ( 282) 274 65.7 1.8e-10
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 274 65.8 2e-10
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 274 65.8 2e-10
XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-pr ( 413) 273 65.6 2.8e-10
NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans ( 413) 273 65.6 2.8e-10
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 270 65.0 3.9e-10
XP_011534867 (OMIM: 186947) PREDICTED: peptidyl-pr ( 191) 266 64.0 4.1e-10
NP_071393 (OMIM: 617076) FK506-binding protein-lik ( 349) 269 64.8 4.3e-10
NP_002004 (OMIM: 186947) peptidyl-prolyl cis-trans ( 224) 266 64.0 4.6e-10
NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-tr ( 221) 236 58.0 3.1e-08
NP_851939 (OMIM: 607062) peptidyl-prolyl cis-trans ( 222) 227 56.1 1.1e-07
XP_011523402 (OMIM: 259450,607063,610968) PREDICTE ( 510) 230 57.0 1.4e-07
NP_001028226 (OMIM: 268000,604392,604393) aryl-hyd ( 321) 220 54.8 3.9e-07
NP_001028227 (OMIM: 268000,604392,604393) aryl-hyd ( 324) 220 54.8 4e-07
NP_001272331 (OMIM: 268000,604392,604393) aryl-hyd ( 345) 220 54.8 4.2e-07
NP_001272329 (OMIM: 268000,604392,604393) aryl-hyd ( 362) 220 54.9 4.3e-07
NP_001272328 (OMIM: 268000,604392,604393) aryl-hyd ( 372) 220 54.9 4.4e-07
NP_055151 (OMIM: 268000,604392,604393) aryl-hydroc ( 384) 220 54.9 4.5e-07
NP_003968 (OMIM: 102200,219090,600634,605555) AH r ( 330) 219 54.6 4.6e-07
NP_001289888 (OMIM: 102200,219090,600634,605555) A ( 271) 212 53.2 1.1e-06
XP_016876582 (OMIM: 186947) PREDICTED: peptidyl-pr ( 196) 210 52.7 1.1e-06
NP_060416 (OMIM: 614505,614557) peptidyl-prolyl ci ( 211) 210 52.7 1.1e-06
XP_016876581 (OMIM: 186947) PREDICTED: peptidyl-pr ( 229) 210 52.7 1.2e-06
NP_473374 (OMIM: 600620) peptidyl-prolyl cis-trans ( 80) 202 50.8 1.6e-06
>>NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 3026 init1: 3026 opt: 3026 Z-score: 3318.2 bits: 623.2 E(85289): 4.3e-178
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 457 aa overlap (1-457:1-457)
10 20 30 40 50 60
pF1KB8 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
370 380 390 400 410 420
430 440 450
pF1KB8 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
:::::::::::::::::::::::::::::::::::::
NP_001 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
430 440 450
>>NP_004108 (OMIM: 602623,608516) peptidyl-prolyl cis-tr (457 aa)
initn: 3026 init1: 3026 opt: 3026 Z-score: 3318.2 bits: 623.2 E(85289): 4.3e-178
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 457 aa overlap (1-457:1-457)
10 20 30 40 50 60
pF1KB8 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
370 380 390 400 410 420
430 440 450
pF1KB8 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
:::::::::::::::::::::::::::::::::::::
NP_004 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
430 440 450
>>NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 3026 init1: 3026 opt: 3026 Z-score: 3318.2 bits: 623.2 E(85289): 4.3e-178
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 457 aa overlap (1-457:1-457)
10 20 30 40 50 60
pF1KB8 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
370 380 390 400 410 420
430 440 450
pF1KB8 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
:::::::::::::::::::::::::::::::::::::
NP_001 AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
430 440 450
>>NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans iso (459 aa)
initn: 1729 init1: 1125 opt: 1730 Z-score: 1899.6 bits: 360.8 E(85289): 4.5e-99
Smith-Waterman score: 1730; 55.2% identity (80.6% similar) in 458 aa overlap (1-450:1-458)
10 20 30 40 50 60
pF1KB8 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
::..: .. . .: . .: ::. :.:.::::..:: :.: : :::::.:.::: :
NP_002 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
: .: ::::: ::.. : :.::::.:::::::..:::: ::.::. :::::::::::: :
NP_002 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 KIPSNATLFFEIELLDFKGEDLFE--DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG
::: :::: ::.::..:::::: : ::::::: . .::::..::::: ::. :::
NP_002 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN
..:: :.. : .::::. :.: :...:...:.. :. :.:: : :.:: .:: :: : ::
NP_002 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 AELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL
::: ::. :::::::::::::...:::::..::::.:::::: ::: ::..:: ::::::
NP_002 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRG
:.: ..:..:.. .... ::. ::::::.:::. .. :.: :.::: ::: :::::.:::
NP_002 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 EAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAE
::.: .:.:: :..::.:::.. :.::::. :...::.. ... :....:::::...::
NP_002 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
370 380 390 400 410 420
420 430 440 450
pF1KB8 QDAKEEANKAMGKKTS------EGVTNEKGTDSQAMEEEKPEGHV
.. : .:. . : . . : .: :..::. :
NP_002 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
430 440 450
>>XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-prolyl (414 aa)
initn: 1615 init1: 1125 opt: 1616 Z-score: 1775.5 bits: 337.6 E(85289): 3.7e-92
Smith-Waterman score: 1616; 57.0% identity (81.8% similar) in 412 aa overlap (47-450:2-413)
20 30 40 50 60 70
pF1KB8 TVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEP
:::::.:.::: : : .: ::::: ::..
XP_011 MPMIGDRVFVHYTGWLLDGTKFDSSLDRKDK
10 20 30
80 90 100 110 120 130
pF1KB8 FVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLD
: :.::::.:::::::..:::: ::.::. :::::::::::: :::: :::: ::.::..
XP_011 FSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB8 FKGEDLFE--DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGE
:::::: : ::::::: . .::::..::::: ::. ::: ..:: :.. : .::::
XP_011 FKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 DHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAK
. :.: :...:...:.. :. :.:: : :.:: .:: :: : ::::: ::. ::::::::
XP_011 NLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB8 ESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASES
:::::...:::::..::::.:::::: ::: ::..:: :::::::.: ..:..:.. ...
XP_011 ESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQA
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB8 FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDF
. ::. ::::::.:::. .. :.: :.::: ::: :::::.:::::.: .:.:: :..::
XP_011 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADF
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB8 EKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTS
.:::.. :.::::. :...::.. ... :....:::::...::.. : .:. . : . .
XP_011 QKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKAEASSGDHPT
340 350 360 370 380 390
440 450
pF1KB8 ------EGVTNEKGTDSQAMEEEKPEGHV
: .: :..::. :
XP_011 DTEMKEEQKSNTAGSQSQVETEA
400 410
>>NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl cis (268 aa)
initn: 1501 init1: 1501 opt: 1501 Z-score: 1652.3 bits: 314.2 E(85289): 2.7e-85
Smith-Waterman score: 1501; 100.0% identity (100.0% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KB8 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAE
::::::::::::::::::::::::::::::::::::::::::
NP_001 FDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRPKNPGRWIPKKNWSRLPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM
NP_001 SKRREPYTSRCVSPYAILSISKNLFKCW
250 260
>>NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans iso (108 aa)
initn: 325 init1: 325 opt: 325 Z-score: 370.8 bits: 75.8 E(85289): 6.5e-14
Smith-Waterman score: 325; 50.0% identity (74.5% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB8 EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
:.:. : :. ::: : :.::::::::
NP_004 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB8 HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFF
.:::.:: : .:: .:::... :.: :. :. .: : :. :::..: :: ::::.:
NP_004 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB8 EIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTV
..:::...
NP_004 DVELLNLE
>>NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans iso (108 aa)
initn: 321 init1: 321 opt: 321 Z-score: 366.4 bits: 75.0 E(85289): 1.1e-13
Smith-Waterman score: 321; 50.0% identity (72.4% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB8 EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
:.:. : :. ::: : : .:::::::
NP_000 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB8 HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFF
.:::.:: : ::: .::..:. ::: :. :. .: .:.::::..: :: .::: :
NP_000 RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB8 EIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTV
..::: ..
NP_000 DVELLKLE
>>NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans iso (108 aa)
initn: 321 init1: 321 opt: 321 Z-score: 366.4 bits: 75.0 E(85289): 1.1e-13
Smith-Waterman score: 321; 50.0% identity (72.4% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB8 EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
:.:. : :. ::: : : .:::::::
NP_463 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB8 HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFF
.:::.:: : ::: .::..:. ::: :. :. .: .:.::::..: :: .::: :
NP_463 RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB8 EIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTV
..::: ..
NP_463 DVELLKLE
>>XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-prolyl (142 aa)
initn: 318 init1: 318 opt: 318 Z-score: 361.4 bits: 74.4 E(85289): 2.2e-13
Smith-Waterman score: 318; 51.0% identity (70.0% similar) in 100 aa overlap (36-135:35-134)
10 20 30 40 50 60
pF1KB8 GAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGK
. ::: . :: ...:: ::: .:
XP_005 WFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSN
.:::: .:.::::::: :::::.:: :. : .:: .:. : .:: :. ::::..
XP_005 EFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 ATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRD
::: ::.:::
XP_005 ATLVFEVELLKIERRTEL
130 140
457 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:01:29 2016 done: Fri Nov 4 12:01:31 2016
Total Scan time: 8.830 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]